SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3471c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_transport_protein_Sec23A_isoform_X1_[Papilio_xuthus]
Ontology
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030127 C COPII vesicle coat
GO:0030134 C COPII-coated ER to Golgi transport vesicle
GO:0030868 C smooth endoplasmic reticulum membrane
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:49.92 TPM:48.91
ORF EntryO_TrvaFAMAMG2687_complete:A_TrvaFAMAMG_TR3471c0_g1_i1
Sequence
(Nucleotide)
GCCAAATCAGCCAGCCTCTCCCGTCTGCTGGAATTTCTAAAAATCGTTTTAATTGTGAAA
TTTCTGAATGAGGACATAAAAAGATTTAATGAAATATCTTATGATTGTCTAAGTGATTTA
CCGCACGTGTATTTGGAGCCGATATGGCCACGTACGAAGAGTTTATCCAGCAGAATGAAG
ACCGGGATGGCATACGGTTCACCTGGAACGTGTGGCCATCAAGCAGAATAGAATCTACAA
GACTAGTCGTACCCTTGGCCTGTCTGTACCAACCGCTGAAGGAGCGCCCCGATCTGCCGC
CGATACAGTATGAGCCCGTACTCTGCACACGAAATACATGCAGAGCTATACTGAACCCAA
TGTGTCAGGTGGACTACAGAGCTAAACTATGGGTCTGCAACTTTTGCTTCCAAAGAAATC
CGTTCCCACCTCAATATGCCGCAATATCAGAACAGCATCAACCGGCGGAATTAATCCCAA
ACTTCTCTACCATAGAGTATACAATAACCAGGGCTCAGGCCATGCCTCCGATATACCTGC
TGGTTGTCGATACTTGTATGGATGAGGAGGAACTAGGAGCATTGAAGGATTCCCTGCAGA
CTTCCCTGAGTTTGATGCCACAGAATGCACTTGTGGGACTAATAACATTTGGAAAAATGG
TACAAATTCATGAATTAGGAACTGAGGGTATATCAAAATGCTATGTTTTCAAAGGAACAA
AAGATTTATCAGCCAAGCAGATTCAAGAGCAACTTGCCATTGGTCGCGTAAATGCTCCCA
ATCCCCAGCAACAGCGTCCTGGAGCCCCTGTACCCCAGCCTCCGGCCCACAGGTTCTTGC
AGCCTGTCAAACAATGTGATATGGCATTAACAGATCTCCTCGGAGAACTAGGAAGGGATC
CTTGGCCGTTAGGAGTCGGAAAGAGACCGCTACGAAGCAGCGGTGTAGCATTATCTTTAG
CTGTAGGTTTGTTAGAGGTCACCTACCCTAACACTGGTGGACGAATCATGCTCTTCCTCG
GTGGACCTTGCTCTCAAGGCCCAGGTCAGGTTGTGAACGATGAGCTCAAGCAGCCAATCC
GGTCTCATCATGACATTCAAAAAGACAATGCTAAGTATATGAAGAAGGCTATCAAACATT
ACGAAGCTTTATCGTTGAGGTCTGCGACAAATGGGCATTCTATTGATATTTATTCTTGTG
CCTTGGATCAGACTGGTTTAATGGAGATGAAGCAGTGCTGTAATTCTACTGGAGGTCACA
TGGTGATGGGGGATTCCTTCAACTCATCTTTATTCAAACAGACATTCCAAAGAGTGTTTG
CTAAAGACACAAAAGGAGATTATAAGATGGCTTTTAACGGTACCCTAGAAGTTAAGTGCA
GTCGTGAACTGAAGATATCGGGAGCGATTGGTTCCTGTGTTTCTTTGAACGTGAAAGGGC
CCTGTGTGTCGGACCAGGAGGTCGGAATGGGTAACACGTGTCAATGGAAGATGTGTACAT
TCACACCTAGCACTACGATGGCTATATTCTTTGAGGTAGCGAACCAAACAGCGGCGGTGC
CTCAAGGCGGACGCGGCTGTGTTCAGTTCATAACTCAGTACCAACACTCCAGTGGACAGA
GGCGCGTTCGAGTTACTACCGTCGCTAGGAATTGGGGCGACGCCGCAGTAAGCCTGCACC
ACATCTCGGCCGGGTTCGACCAGGAGGCGGCGGCCGTGGTGATGGCGCGGCTCGTGGTGT
ACCGCGCCGAGATCGAGGACGGACCCGACGTGCTGCGCTGGCTCGATAGAATGCTTATAC
GATTGTGTCAGAAGTTCGGCGAGTACGGCAAAGACGATCCGAACAGTTTCCGTTTGTCAG
AGAACTTCAGTCTGTACCCGCAGTTCATGTACCATCTCAGACGGTCGCAGTTCCTACAGG
TCTTCAACAATTCACCTGATGAAACTACCTTCTACAGACACATGTTGATGCGTGAAGATC
TAACACAGTCGTTGATCATGATCCAGCCCATCCTGTACTCGTATAGCTTCGGAGGAGCGC
CCGAACCTGTGCTGTTAGACACCTCGTCCATACAGGCAGACAGAATACTACTGATGGACA
CTTTCTTCCAAATATTGATTTATCATGGAGAGACGATAGCCCAATGGCGCGCCCTGCGTT
ACCAAGACATGGCCGAGTACGAGAGCTTCGCGCAACTACTGCGGGCGCCCGTCGACGACG
CGCAGGAGATACTGCAGAGCCGCTTCCCCGTGCCGCGGTACATCGATACTGAGCACGGAG
GATCACAGGCTCGTTTCCTCCTGTCCAAAGTAAATCCATCGCAAACGCATAACAACATGT
ACGCTTATGGCGGGGCGATGCCGATACCATCTGCGGACGGTGGAGCTCCAGTGTTGACTG
ACGATGTGTCTCTGCAAGTATTCATGGAACATCTGAAGAAGTTGGCCGTCTCATCTACAG
CTTAGTTTTAGGCTAAAACGCATCTTAAAGTTAAATGTAATTTGTGACAGTTTTTATAAA
CTATTCATTTGTAATTATTAAACAGCAGAGATTTTTTTATTTTTCTTTAAAAAAACTGCA
TGGACATGACTATTTTACTATATTAATTCTTTTACGAACATCTGTATTCATTTATGTTCA
AAATTTCATGGACATTCTTTTTTTAATTCTTTCGAGTTCGTGAAAAACTATACTGATTTC
ATAATCTCCAGTTTCTGAAACGATATTTTTCGGCTACCCTCATTATAGTACTATCTACAT
GACAGAGAAATATCATTTTCATTTGATGGTAGTTTCGAAGCGCAAAATGTAATTCTACTA
ATGCATGATTTAATCTTAAAAGATAAATGATCATGAGATAGTATTCTGACAATTAGTTGA
AAATAAAAGTAATAAAAAAAATGATTGATTTATTGAATAAAAAGGATATCAAATGTGGAA
TCTGTTTTTCAAATATTAATCAATGATTCTTAAAATAAAACAGCTACTTATTCCAGATTA
AATTTTATGTAAAGATGCGATATGCAGTAAGAATTAATTATTGCCAACATAAGAGAGTTC
AGTTATGTATAGTTTTGTGTGCGGTAAAGTAATTTTCTTTTAAGTTATATTTTCTAAAAT
TATTGTACATTATAATATGGAATAAAGTGTTTACTTATAATAAAAAAAAAA
(3171 bp)

- SilkBase 1999-2023 -