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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3399c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_pore_complex_protein_Nup133_[Bombyx_mori]
Ontology
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000940 C outer kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006406 P mRNA export from nucleus
GO:0006409 P tRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0007062 P sister chromatid cohesion
GO:0007077 P mitotic nuclear membrane disassembly
GO:0010827 P regulation of glucose transmembrane transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0016925 P protein sumoylation
GO:0017056 F structural constituent of nuclear pore
GO:0019083 P viral transcription
GO:0021915 P neural tube development
GO:0022008 P neurogenesis
GO:0031047 P gene silencing by RNA
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0048339 P paraxial mesoderm development
GO:0051028 P mRNA transport
GO:0061053 P somite development
GO:0075733 P intracellular transport of virus
GO:1900034 P regulation of cellular response to heat
Transcript
Level		FPKM:3.25 TPM:3.19
ORF EntryO_TrvaFAMAMG2647_5prime_partial:A_TrvaFAMAMG_TR3399c0_g2_i1
Sequence
(Nucleotide)
GGAAGGTTTAAACGGTGAGAAAATTTCCTTATGTGACACAGACGAAGTTGTGTAGGCCAA
CTAGTTATTATTAATTTTCTAAGTGTAATATAATAGCGATCGTGGTTAAATAGTAAATAC
ACAACATGTTGATATTGCTATTAGTAGCTGCACACTGACATATTACACACACACACATAC
AATTAATTCAAGAAGCTTCACTCTGTAATCCATGGTTTTTCTAGTTTAGTTCTAAAACTG
AACCACGATTTGATTGTCTATACAAAATTTCATGATTAATATTTTTCGACCCGACCCAAG
AATATTCTAAAATTAACCAAATCAAAATCTCATTGTGAACAGCTCTATGTTATGCAACGT
GATGGTGAACAGTTACCATTAGTCGTGGTGCATGAGTCGCGTGTGCAGACACTCGTAGCC
GTACTTGAGGATGTAGTGGATGTTGGGATCCTCAGCGAGCTCGGCCAGCTCGGGGCTGGT
GATCAACTCTTCGAATTCCGGTAGCAGTACCTCTAGGTCACCACCCATAACATTGACGAG
GTCTATGAGCCTGAAGAACGTTTTGTTCATGATGTCATCGTTGACGGTCTCCGCCGAGCA
CGCGGACCAGTCGTCGCGGAGGATGCTCGCTATCCATATCCTGATTCTGAGCACTTCCTT
CTGGTTGTGATCCTGTATGTAATCGGTGAGGTCCAGCGCCTTCTTGTAGTCGTACTCCGT
CACGCCGCTACTGTCGCAGTCCACGTACATCATCGCCAGGTCCTCGGGGTCCAGCACGGG
CATGCTCTCGGCGCGCAGGCCGTGGTGCGCCAGCACGTCGCGGGGCACGGCCGCGTGCTG
CTCCACCAGGGCGAGGCGCCGCTCCACGTCGCGCCGGGTGCTGGACTCCGGGTCGTCCTC
CGACACCAGCAGGCACAGCTTGCTGAGGGACGCCAGGGTGGCCATGCGGTCGAGGTTGTC
GGTCTCCCTGTGCGCGAGGTTGCAGAGGGCGGCGGCGGCGCCGGAGTGCTCCCCGCGCTG
CACGTGGTGCAGGGCCAGCAGGTCGGGGCGCTGGTTGCGGAGCCACGCCGACAGGCGCAC
GCCGCCCCCCACTCCTTTAACGAGTGCGGCGGCGGGACGGCCTCCCTTGCTGGACAGCCA
CTCGTACGTGATCTCCGCCATGCCCTCTTCTGCGTATTTATCGACGTAGTTGGTGAGTTT
CTCCATATCGTTGTTGTTGACGCATATCTCGACGAGCAGCTCGAAGTCCTTGAACTTCTC
TGCGAGTGAGGCCGCGCGCTCCCACTCTTTTTCGTCAACGAAAGGCCTAATAAGTTCCCT
CCTCAGTTTACAGTAGAGGTGGTGCGCGTGCGGCTCCTCGCTGAGCGAGTGCGCGCCGCC
CAGCACCACCTCCGCCAGCGACGCCGCGTGCTCCGACATCTGCGCCCGCAGCGTCGGCTC
GCCCGTCTTGTTCTCGAACTCGGTGAAGCTCTTGTGTATGAGTTGTATGACGGGCGCGAA
CAGAGCCTCGCCGCCCAGCGGAGGGGGGGACACCGCGCGCCACGACGAACGACCCTTCAG
CATCTCCAGCAGGACGCTGCTCAGCACGGCGAGCGCGTTGGGTCTGTCGGTGGGCACGGG
GCGCGCCAGCACCAGCAGCACGTCGTTGAGCCGCGACACGCGCCGGTAGCACACGTCCGA
GGGGGACAGCACGCCGCTCTCCGCGTCGCGCCATCCGCGGACCGTCTCGCATATGACGGA
GTCTATGAAGGCGGCGTGCGGTCCGTGCTGCAGACGCCTGAGTCCGGCGGCTCCCAGCGC
GCGCTCCCACGCGGTGCACAACACACTTTCACTGCTGCACACGCCTTCGTTCTCGACAGT
GACGAGCCCCAGTCTCTGCCACAGCCCCGTGGCGCGCAGGAACTCGTAGAACAAGGCGAG
CGCGCGCTGCTTGTCGCGGAGCTGCGCCTCTATCTGCAGCGCCGTGGAGCTGCCTAGCGG
GATGTTGGTGGCCTGACCGCTTTGACGCTTCCATCTCGGGTCCCCGGCCGGCATGTCGTC
CAGTATCTCCATGGCGACGGTGACGACGGCGCGGTCGAGCGTGGCGTCCACGTCGTGGTG
GTGGTGGGGGGGCAGCGCGTCGTCCAGCGCCGCGCGACACGCGTCCGCCTCGCGCCGCAC
GTGGTGCAGGAACGCGACCTTCACGCGCCCGCACACGTCCGTCGCTACGGAGCTCACCTC
ACGTGGATCAATTTCATAAAGGGCCAAGTTTCCTTCGTACAAGTCGGCTTGACTCGACGT
ACTGATGGGACTATCACAAACCGTTGCGGCGTGCGAGTGCAAGGAGAGCGCGAGCAGGCC
GTGCGCGGTCGTGAAGAGCGCGGGGCCATGAGGACAGCGAGCCGCGCTCAGCACGCGGTC
CCCGCTACCCACCTCCATCACCTCCGTGTCGGATGTACCAGACAGTGACGTCAGCGCGAT
GTACTTCGAGGTGTATAACAGAGCCCTATTGTTGAAGGGCAGGAAACGCGGCGGCTCCTC
CGCCTCTGAAGGGAAGCTGCGGACAGGGACCAGTGA
(2556 bp)

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