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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3399c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_nuclear_pore_complex_protein_Nup133_[Papilio_xuthus]
Ontology
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000940 C outer kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0021915 P neural tube development
GO:0022008 P neurogenesis
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0048339 P paraxial mesoderm development
GO:0051028 P mRNA transport
GO:0061053 P somite development
Transcript
Level		FPKM:2.95 TPM:2.89
ORF EntryO_TrvaFAMAMG2645_3prime_partial:A_TrvaFAMAMG_TR3399c0_g1_i1
Sequence
(Nucleotide)
GATGTACTTCGAGGTGTATAACAGAGCCCTATTGTTGAAGGGCAGGAAACGCGGCGGCTC
CTCCGCCTCTGAAGGGAAGCTGCGGACAGGGACCAGTGACGTCACGCGCGGAGCAGACGG
ATCCTCTACGTTGATGTGCGCTATAGCGTATCTCATGTCGGGTGAGCGGGTGACGTTGAC
GGCCGCGATGAGCAGCAGGATGCTGTCCTTGCCGCCGCTCTGCACGTCCAGCGCCATTAT
CTCTAGGCTGTTTAGGTCTCCAGCGTGCGGCTGTAGATGCGGCCTGGCGGCGAGTGCGAG
CGGCGTCCTGAGCGAGTGCTGATGCAGCAGCGCGGGCGGCCGCCACACCTGCAGCACGGG
GCCGCGCGCCACCAGCCACACGCACTCACCCGCCCATACTGCTCCTACTAGACGAGTATC
TGTATGTGCCGGCATAGATCCAAAGAACAGCAGTGACACTCTTCGTCCGATGCCACCGAG
CCAACCACTTGGAGGTCGCAGTGTGCAACAATTCACTGTTGCTCGGCCATCAACAACAGC
AGGAGTCAACAGCACCACAGTACAAGTCGTAGTAGCCAGTATGAGGCCGGAGCTGGTGTA
CTCGCCCAGCTTCTCACACTCCTGGCCCGCCAGCTCACACGTCACGTCCACGTACACCTC
CTCCTGACCGACTGACGGCCAGTAGCGGATCACACCTTCCGGTGATACTCCAATGCATGA
TGGCATCTGTGAATCATTTTCGTAAAACACTACAACTAAATCTGCTTTATGAGCTAGGTC
AGTCTGCGGTAGTGTTAGTTCCCGAGCAGCTGATATCCCGGTCACATTCCCCGCATCTTC
ATCATCGTCCAGCGATGATTGTTCCCAGGCCAGGATACGTCTTCCTGATACCACCCAGCA
CCAACCGCAGGGGGAGATGCGAACTGAGATGTCTCCGCTTGCGAAGGCAAGAGCCTCTGT
AACCGTCACAGGCATAGGAGCGCCGTAAGTCTCAAGAGTCATCGTAGGAGTTTTGTAGAT
CACATCGCCGGTTGGTTCGCTTTGTGACTGCATAAATTTACTTTGGCTCTTTTTTTGCCG
TTGACAAACCACCGGGCCTTCTACTTGACAAAGATTGCCTAACTCGAGGTGAGAATGGGC
TCCTCATAGCTCCTGTGCTACTAAAATCCATTATTATAAATGTAAAACTAAAGTTAAATG
CAAATTAATTGACCCAACACCAAGCAAAATATTTCAAAACGTCAAAAAAA
(1250 bp)

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