SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3378c0_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcriptional_adapter_2B_isoform_X2_[Bombyx_mori]
Ontology
GO:0000124 C SAGA complex
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007412 P axon target recognition
GO:0008270 F zinc ion binding
GO:0016573 P histone acetylation
GO:0035066 P positive regulation of histone acetylation
GO:0035079 P polytene chromosome puffing
GO:0035222 P wing disc pattern formation
GO:0043966 P histone H3 acetylation
GO:0046872 F metal ion binding
GO:2000331 P regulation of terminal button organization
Transcript
Level		FPKM:1.07 TPM:1.05
ORF EntryO_TrvaFAMAMG2531_complete:A_TrvaFAMAMG_TR3378c0_g2_i2
Sequence
(Nucleotide)
CTGAAATTTGCATTACTTTGAACACTGCCAACGTAAAAGTTTTAAAGTTATATAGTATAG
TAGTTACATAAATCATGTCATTTTCAGATCTCTACGCCAAATATAATTGCACTTATTGTC
AAGAGGAAATTAACGGCGTAAGAGTTAAATGTACGGATTGTGTTGATTTTGATATTTGTT
TGCAGTGTTTTTCTCTTGGCGCTGAAATTGGACAACATAAAAATGACCATTCGTATCAAT
TTGTGGACTCTGGGGCTTTTGGAATATTTTTGGGACGCAGTAGCTGGTCAGCTAACGAAG
AAGTTAGGTTATTAGATGCCATAGAACAGTTTGGTTTTGGTAATTGGGAAGATATAGCAA
AGCACATAGAAACTAGAACTCCTGAAGAAGCGAAAGATGAGTACATAACTAGGTACCTGG
AGGGTACTATAGGTAAAGCTACATGGGGTAATATAGAGAGTACCTCACGGCCATCACTGC
ATTGTGCTGACAAAGATGAAGGACCACTGGGTCCATCTGCAGTATCCCGCCTTCCCAACC
TTGCCATAACTGTAGACGAAGCTGCACAGCTCGGTTATACACCAAATAGAGATGATTTCG
AAAGGGAACACGATCATGAGGCTGAGCAGTTGATTTCAACATTATCATTGAACCCAGATG
ATGATGAATTAGATGTTGCCTTAAAACTGACACAAGTTGATATTTACATTAGAAGATTAA
GAGAAAGAACAAGAAGAAAAAGATTAGTAAGAGACTACCAACTAGTATCAGTCTTCTTCA
ACAATCAAAGAAATAAACAAAAGACTCTTGGAAAACTTGCCAAAGAAAAGAAAGAGTTCA
TGGATCGTCTCCGCTGGATGGCGCAGTTCTACGGTCGCGCGGAGCAGGCGTGTGTGTCGA
GCGGGCTGTGGCGCGAGCGAGAGCTGCGCGTGCGGCTGGCGGAGCTGCACCGGTACCGAC
TGGCCGGCGTCACGCGCCTCGAGGAGTGCGCGCACCACGACCAGCACGCCGCGCTGCGAC
GCTCCAACCATCACGAGCGGAACCAGTGGGTGCCCGGAAACCAACCAGATAAAAGAGCAA
ACATTGATCAGCTCGCTGCAGCAAAGAAAAAGGTATTGTTTGCATATAAATTGCTTTTAC
TTTGTAACTAACAATATTTGTAAACCGACCAAAGTTTTGGTGCTTTTTGTACTTTTTTAT
ATTTGTTTATTATGATTCAATTAGTAGGAGTGTTATTAACATATTTTATAATCACACGAC
AGAGATCAATTTTGGTCAAAATTAGATTTTTGTTCTATCATAGAAAGGGTCAACAGTCAT
CTGCCTTAATTTTGAAATTGTTAGCTTAACATCCTGTATGTACTGTAATAACCCATCACT
GCTCACTGCTAGGCTCAGGTGTCTTCAGTCCCTCTAATCTGTTTGTTATACGGTTAAGAG
CGGTTCGCGCTTCATGGCTCACCTGATACCAAGCGGTTACTGTTGCTCATCAATAAAGAC
TTCTACAAATATATTTTTTTCTAATGAATAAA
(1532 bp)

- SilkBase 1999-2023 -