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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3369c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106129228_[Amyelois_transitella]
Ontology
GO:0000287 F magnesium ion binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005737 C cytoplasm
GO:0006401 P RNA catabolic process
GO:0016787 F hydrolase activity
GO:0043137 P DNA replication, removal of RNA primer
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:0.72 TPM:0.71
ORF EntryO_TrvaFAMAMG2486_5prime_partial:A_TrvaFAMAMG_TR3369c0_g1_i1
Sequence
(Nucleotide)
CTGCATTTTGCATGTTAGATTCTTTAGAACAAGTTAAATTTAAGTTGATGGGTAAATTTT
TATCTATAATGTATGCCGAAATGTTTGCTATTAATGAGGCCCTGTCTTATGCCAGAACAC
TGTCTTCAGATAAAATAGTAATATTTACGGACTCAAAATCAGCATTACAACACCTGGCTC
GGTGCACCTCGACCATTCGAGGCACACCGATAGCCTACCACGCCATAAAGACCATTTTGG
AACTTCAAACAATGGGCAAAACAGTGGTTTTGCAGTGGATTCCAGCCCATATAGGTTTTA
AAGGCAATGAGATTGCAGATAAGTTGGCTAAAACAGCAATTTCTGATGGTCTGGAGATTC
ATTGCAAACCATATTATACACACTATATGCAAATGATTAAGCAAAACATGCTGGCAGACT
GGAAAGAGTACTTTGACGAGAGATCTAAGGAGAAGGGTATTTGGTATAGAACAATTCAGC
CTCATCCATTGAGCGTACCTTGGATTGACAACAAACACATGAGCACTAGGGAAACCGTAT
CAGCGTTAAGACTAAGATCTGGGCACATTCCGTCCAAGCGATTTGCGTTTCTGATGCGCC
ACGCCCCGTCTCCAATGTGTGACAGTTGCAACAGGGTTGATGATGTTTACCACGTTCTGA
TGGAGTGTGTCCGATATCCAGAGATTCGGAAAATTGTACCACACAAAGGAGTGCACATTG
GAGGATGCAACAGTATTTTAGCAGAACCTATATCAGATTCAGCTCGACAAATCGTCAAGC
TATTTGCAAACCCCAATACAACTTAAACATAAAATAATTTTGTATTTCGATTTTGATAAA
AATGTTAGAAGAACTTAATTAATAAATAAGATGTGTAATAATAGTAAGATGTGTAATAAT
AGTATAAATAAGATATTGTACGGTGCTAATGTATCAGGACGGCATAGTCATTAAAATGAC
TAAGTCCTTTTTTTGTGAAG
(980 bp)

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