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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3338c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		endonuclease-reverse_transcriptase_[Bombyx_mori]
Ontology
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0009036 F type II site-specific deoxyribonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0032197 P transposition, RNA-mediated
GO:0032199 P reverse transcription involved in RNA-mediated transposition
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:8.51 TPM:8.34
ORF EntryO_TrvaFAMAMG2379_complete:A_TrvaFAMAMG_TR3338c0_g2_i1
Sequence
(Nucleotide)
CCTGACCACCATACACTACCTCGTCCGGTCGGAGATCTCCCTTTGGCCATAAGTCCACAG
TCTTTTTAAGATGTTATTAATGTTATTATTATTGTTATTCGAATTACAATGAATAAGAAT
AAATGAAAAGATTTTCAAAAACCCTTTTTATGTTTTATGACTGAATTTTTTTGATATGAT
GATCTTCTTTTTCTTGTATTTTTTTATACTTTATCCTATTTATATTCTTGCTTTATTTGT
TGAGACACCCAGTTTAACCATTTACTTTCTAGAAACAAAAGCATTGGTAATCTAATAAGT
AATTTAATTTGATTTTATTAGAAACGATGATATTTATTAGAAATTAATTATGGTTTGTTG
GATTTACTAGATTAATTCAGTGGATTAACTTTTATATAAAATACTATTAAAATATAATAA
CTATAATATAATATAATTATGAATAGGTATTTAATTTTATGCCATACGAAATATATTTTT
ATATAGATAGTTCTAAAGCAAGTGATTCAGACAGAGACAACATATTTGACAGACAGGCGT
ACCAACCTAACGAGAGTGGAAATTATACTGTTCTTCTTGCGTTCCGTTTTACGCACTTCT
ACATAAAAAATAAAAAAATATATATATATTAGTCGTGTATAAAAAGCAAAAAATAGAAAT
CTATCAAAATGCAACAAGATCTCGACATTCTTTTTGAAAAAATCAAAAACCAAATGCAAC
TGCAAACTAAAGAAATAACTGAAAACGTTATGATAAAAATCAACGAAAAACTACAAACAT
TGATTGAAGAAAATTCTACACTCAAAAACAAAATCGAGGTGCTGGAAAACAAAGTTAATT
TTCTAGAAAAGGAGAGAAGGAAGAACAATTTGATTATATTCGGACTTGAAGAAACAGAAA
ATTCTACCTTGGAGCTTCTGGCACAACTGACAAGGGAAATACGAGGCCTGGACATTGAAA
TAGAAGCTCACGATATTAGTAAAGCTCATCGAATTGGGAAACGCGAAGGTGAAAAAATTA
GGCCTGTACTTCTAACGCTTAGTACAATCTGGAAAAGAAACGAGATATTAAAAAATAAGA
GAAAAGCCAAAAAGATAAAACTTACGGAAGACTTTCCGAAACAAGTACTGGAAACAAGAA
AATCACTTCAGGAAAAGTTAAGAGAAGAAAGGAAGAATGGCAACCTGGCGTATATTAGGT
ATGATAAACTAATTGTGAAGGAAAACAGGCAAAGTGAAAAGCGAAAAAGGTCTCCGACAT
GCAGTCCACAGGATGGAGGAAGCGCCACATCTCACATCGTAAAAACTACACCTAAGATCA
ATAAACAAAATGCATTTGATCTTATTAAACCTAGGAAAAATTATACTGCAAGCAAGATTA
ATAAACAATAGCAACTAACGGATCAATACCGGAACTCTGAACATATTTCAAACAAAAACA
TACATAACACACACTTAAACCCCAAGCCGGGTGGTCGCCGTGGGGTAGTTGACCAAATCC
CTCTAGTCGAAAAGGTTGCCCAAACAAACCAAACAACAAACCTTAAGAATCAGAACAAAA
CTGAATTATCAACCTGGAATATTGCAGCACTTAATGTAAGAACATTAAAATCTGATGATC
ATCTGTCGGAACTAGACTACGCCTTACGGGAAATCAAATGGGACATTATTGGATTGAGCG
AAACAAGAAGAATGGGAGAAACTATCAGCGAAAGGGAAAACTTCATTTTGTATCATAAAG
GCGAGACACCAGGACAAAGAGGCGTAGGCTTCCTAGTAAAACCTCATATTAAAACCCATA
TAGTCGAATTCCGAGGAGTTTCCGATAGAATTGCAGTTCTCCAGATAAATATGCCAAAGT
ACAGGCAGAACTGGGTCTTTATCCAAATCTACGCACCCACAGAGCAATCTGATGCTAATA
ATATTGATCGCTTTTATAACGATCTTAGACAAACTATTAATTTATATGGCAACAAGAATA
TGGTAGTGATGGGGGACTTTAATGCCCAGATTGGGAAGAAACAGAGCAGTTATGAGTTCG
TCATTGGAAATTATGGTTTCGGTAAAAGAAGTCATAATGGCCAGAAACTCGTAGAATTCT
TGATGGAGAATAAACTCACAATTCTTAATACCATGTTCAAGAAGAAAATGCAAAAAAGGT
GGACATGGCTATCCCCGGGTGGGATATACAAAACTGAAATAGATTACATTGTGACCAGCA
ATCCCAAAGCTTTTATAAACATGGACGTCATTCAAAACATCAACTTCCACACTGATCATC
GTATGATACGCAGTGAGCTCAAGACAAAACTACCACAAGGAAGCAGAAGAGCATTTAAAG
TAAATAATACACCTGAGAGCCGCTGCCATGCAACTGTAGCAAAGGAAGAAATTAAACAAC
TACTGGAACAAACAAAAAATACTTATCACAACCCGTTAATTCTGTATAACGATCTTGAAA
AATCTCTGCAGAATAGTAAGGCTGTAAACACAGCAAACATGACACCCAGCTTTAACCCCG
AGATAAGATCCCTTCTCTTAAAGAGAAAGCAACTAATGTCCTCATGCTATAGCAGAAAGG
AAATTATGTATAAAGTAACTGAACTAAGTAAAGAAATCAGATCGAAAATCAGACGACAAC
GGAAATTGAAAAGATCAAAAATCATAGAAGAACACATCTTAAAATCAGGTGGCTTAAAAA
AAGCTTATAAGATACTAAACAGAAACAATAAACAATGGATCACTAAACTAAAAAGAAACG
GAACAACGCTATTGAAAAGAGTCGACATTCAAAATTCAGCTACTAATTTCTATCGGTCTC
TCTACTCAAGTAATGGAAAGGAACAACTTGGCGAGAAATCAAAGGAAAATATTTTTCCAG
AAGAACCCAATATACTTGCCTGGGAGATTGAACGTGCTATAAAATCACAAAAATTGGACA
AGTCCCCGGGACCGGACTGCATTAATAATGAGCTACTACGCGGAACAATGGATGAAATCT
GTCTTATTCTAACTAAACTATTTAATAGCATACTGAAATCAGGAATCATCCCTCATCAAT
GGTGTGAGTCAAACATTATTTTAATATACAAAAAAGGAGATAAAGAAGAAATGGGAAACT
ATAGACCTATCAGTCTTATATCTAATATATACAAGGTATTTGCAAAAGTCATCCTTGACA
GGATAAGCGGCATTCTAGACGAAAATCAGCCAGTGGAGCAGGCCGGTTTCAGGAAAGGTT
TTTCAACTATTGATCATGTACATACAGTCAAGCAGATATTGGAAAAATACAATGAATATG
GAAAAGTCGTCTACTTGGCCTTCATAGATTACAGCAAAGCATTTGATAGTATCTACCACA
GTAGTCTATGGATGACCCTACAGAAACAAGGTATTAGCTCAACCTACATTCGATGTATTA
AAAACATCTATAGAGACTGTAAAGCTAGGATCCAGCTAGAAAAAATTGGTGAAGAATTTC
CAGTGTGCAGAGGAGTTCGCCAGGGTGATCCTTTGTCTCCGAAATTGTTTTCTGCAGCAT
TGGAAGGGATATTTAGAGATATGCAATGGGATGAGATGGGTCTCAACATTAATGGTGTCC
AACTAAACCACCTTCGTTTTGCAGACGATATTGTGCTGTTTGAGGAGAGCCCAGAGCGAC
TACAAATGCTGATAAGCGAACTTCTTAATAAAAGCAAGGCTATCGGCCTAGAAATGAACG
CATCTAAAACAAAGCTGATGACAAACTCTCTCCAAACAGAAATCATAGTAAATGGGACTC
AGCTAGAATTTGTTACAGAATATACGTACCTTGGGCAAATAATTTCTCCCAAAGAACAAA
CAACCAAAGAGATCAACAAAAGAATCGCAGCAGGGTGGGCTAAATATTGGAGCCTAAAAG
AAATTATGAAAAACAAAGACTATAGCATGAACATAAAAAGAAAAACATTTAATACCTGCA
TTCTACCATGTCTCACTTATGGATGCGAAACCTGGGCTCTGGGCCGAGTCCACAGGGAGA
GGCTGAGAACGTGTCAAAGGTCTATGGAGAGAAGCATGCTTGGTATAAAGAAAAGTGACA
AAGTTAAATGTCAAACTATACGAGCTAGAACAAAAGTAACGGACATCCTAACAAAGATCG
ACCAACAGAAGTGGAGATGGGCAGGCCATACTCTCAGAGGCAAAACAGAAAAGTGGAGTA
AAGTAGTCACAAACTGGTACCCGAGAGATGG
(4231 bp)

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