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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3331c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_scaffold_attachment_factor_B1-like_isoform_X2_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0042802 F identical protein binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0060008 P Sertoli cell differentiation
GO:0060765 P regulation of androgen receptor signaling pathway
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:5.78 TPM:5.66
ORF EntryO_TrvaFAMAMG2340_complete:A_TrvaFAMAMG_TR3331c0_g1_i1
Sequence
(Nucleotide)
CCCGCCATGGAAGTTGATGAGGCAGAGAAAAATAGCAGAAAAAGGGAATTAAAAGAAGAG
CCGGAAGCCACACAAGCTAAGAAACCTTGCATTGAGAAAAATAAAACTGAGGATGACCAC
AAAGAAAATAACACAGATGCTGACGATAGCATCAACTTAGATATTGGAGATGATGAATTA
CTCAATGAGGAGACTGACACCAACACAAAAAGTAGTAAGAAAGGTAAGTTTCATTGGATA
ATAAAATTACAGGGAATCAATGGAATAATTTAATACAGTTATTATCAATAACCAACAATA
AACGTAACAAATACTGATGAATTCAATAGTCTTACTGAATATTTTGAGTCGAAAACCAGT
GTTATAGTGCAATGTTTCTTCAAAGCAGCAATTTTTTTCATTTTTCTGTTAACTGTAAAA
TGTAGTTATAAAATGTTCATGTGCCTGGAAGGTGATAATTAATAATGAAGTAGGTGCTGA
TTAGATTTGGCACACGTGACTACTACAAGGAATTAATGTACTTGAAGAAACACAATGCAG
TGCACTCTACTGTATCAATAAAACTGAATCCTGGTTTCCTGCAATTACCTCTAGGAGAAA
GTCACACCCAAGCAAAATGACTGAGCTGACCTCACTGAGCCAATACTCATTACAAGGTGA
AACCAGTGTATGCAGATATAAAAAAAAACAAAGGATGTCACTCAAGGCTTTAACGCCATA
TGCAGATGGTGGTGCTAATGTCCAATCGAGTTTTCAGGTCAGAATTGTATGTACTCTCAC
TATTCAAGTGAGGTCACTAAGAAGATTTTAATTGAAGACATCGTGTCAGTTGTTCAACAT
AGAGACAGTGCGGGCCGCTCAACAAGTGGTGAGCGACCAGTGCTGCCTCCACTCACAACC
AACACTGATGTAGATGAAGCTGAGAACGGCGACACCACAGAGCCTGGCATCGACAACCCA
GCACAGGACACTGCCGCCGCCGATTCGGCATCAGCAGAGGATCCACAAGTTAATGAAGAT
CCTTCACCCACTAGGTTGGTGTGCGTCGATCGGCAACTGCGTCGCCACGTCACGCAAATA
TTCCGCTACGATTGTCATGTATACGTTTATTTACTTTTCGTTATCGCTACAAAGTTTTGC
ACCAATTTACCATGCGTTCGGTGAGCTGCCCTGGAGCGAAAAGCCCTTCAATAACTTCAG
ATTTCATCTGAAGTGAAACAAAAATCATCGCTGGACATCGTATTGCAAGAATTACATGTC
TTGCACTGAAGAAATTAATCCTGTCTGCAGCTGCGAGCCACTATGTCAAGCATCCTTCCT
GCTTCGGTCTCAAGTCAGCCAACACTACAACATTGAGCATCAATGAAACCTTCAAGCAGC
ATTCTCAATCAAGAGTGGAATAATTGTGCAAAACTTTGTAGTTGATTATTATTACAATTC
CTTACCATTCTCCATTAACATTTAAATGTTTCTTGATAAATGAATATGAAAATAACAATT
GATGTTAATTTATAAATCCAAATATTACAACAACATTAAGTACAATGCATTTTTTTATTT
TACAGCAATGATGCAGCAAAGCATGATGGTGAAATAAAAGAGGAGAAAGAAAAGGATATT
GATGGTGATAAAAAAGAGAAAAAAGATGAAACAAAAGAGGGAGCACGTAATCTATGGATA
AGTGGACTCTCAGGAGACACGCGCGCTAAGGATCTTAAACAACTTTGCAGCAAACATGGA
AAGGTCATTGGAGCAAAGGTAGTGACCACAGCCAGGTGGCCTGGATCACGTTGTTTTGGC
TATGTAACTGTAGCAACTGCTCAAGATGCAGAAAACTGTATCAAAAATCTACACCGGACA
GAGCTGCACGGTCGCATGATTTCTGTTGAGAAGGCCAAGTCTGAATCAGAGTCATCATCT
CGCAGGCAGCCCGCCGCGCGCCCTGAACGACGCCCTAGCAAGGAGAAGAAGGAAGAGATA
AAAGAAAACGAGGAAATAAAAGAGGAAGTCAAAGATGTCAAAATAAAAAAAGAAGGCGAT
GTTTCAGCTTCCGAAAGCACTCGTTCAACATCTCGTACGCGAGAGAAATCACATCGCTCA
GACAAGACTGCAGATAAACCGAAAAGGAGCACCAAAAGCAACGAACGGAGGAGATCTCCT
AGAGAAGTGTTATCATTCTCAAAAATATGGAAAGAGCGCGACGTGGCCCGCGCCCGCGAG
AGATCCCGCGCCGCTCGCGAGGAGGAGCGTCGTCGTCGCGCTGCTGAGGAGGCGCTGCGG
GAGCGGGAGCGCAGGCAGCGACAGGAGAAACATCGCCTTGCGCTCGAGAGGGAGAAATTA
CGAGCTGAACGTGAAAAAATCGAACGTGAGAAAAATGAACTTTTGCGATTAGAGCGTGAG
CGACACAGACTAGAGCGAGAAAAACTTGAACTTGAAAGACTCGAACTAAAAAGAGCACAA
CTCAGGTTAGAAGAGGAGCGTCGTAAGCGCGGGTACGAGAGCAGCAGCGGCGGCGGCGGA
TCGGGCGGAGGGTACCGCGGCGGCGTAGAGCCGGCCTACGAACGCGAGCGACACAAGCGC
GCACAGCCGCCGCCTCCGCCCCCGCCCCGAGCGCACTTCGACGCGCCGCCGCCGCCGCGC
TTCGACGCCGCACCCAGGGACCGAGACCGCGACTACAAACGCGACTATCCAAGACATCTA
TCATCTAACACCATGAAATACTCTAGTAACGGAAGTGGCAATGATGATGCCAGACAACCA
ATTCCCCCTGGAACCAGACCAAAGGAACCTAGTCGTTCATATGACTCCCGTGACAGTCGG
TCATATCGTCCTTCTCCTCCGGCCAAACCTGACGCTCGCTGGAACACTGCTCCCAGATAT
ACTGATTCAGCACCACCAGCTAAAGGCAGCAGCGGCGGAGGCGGAGGTAGCAGCGGCGGC
GGCGGAGGCAGCAGCGAGCCGTGGAGTGGAGAGCCGCGATACGCCGGCTACGAGGCGCGC
TCCTACCAGTCCTACCAACCGCCTCCACCCGGAGCCACCTACCCCGACCGATACGCGCCG
CCCTCCAGGGACTATCCCCGCAAATATTAGACTATTGGATGGATTTGCCCCTTCCTTGAA
AAATGTTGAATGGAGTGCGATGTCATTTGTTTGTATAATAATGAACATCTGAAAAAAGTC
ATTCCGTGTTGTATTTGAATGAAAAATATAAAAAAAATGCTTAAACCATCTGATTTTGGG
TTTAAGTAAGACAAGTAATTTAACATAATATTATGTTTGTGACTTTCTAGAATTTACAAA
AAATGTATAGTGTGATAAGAAATGCATATTAATTAAAAATATTAAATGTAAAAAATCACG
TATTCTCTAGATGTAGTTTCACAATTATGCATAGTGGGGATAAATATAATTTGTGTAACA
CGAAAAAAAAAAATCACGTATTCTCTAGAT
(3450 bp)

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