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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3318c0_g3_i6
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_early_endosome_antigen_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0030054 C cell junction
GO:0030426 C growth cone
GO:0042734 C presynaptic membrane
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0048786 C presynaptic active zone
Transcript
Level		FPKM:0.32 TPM:0.31
ORF EntryO_TrvaFAMAMG2250_complete:A_TrvaFAMAMG_TR3318c0_g3_i6
Sequence
(Nucleotide)
CCGTCGCCCAGTCGAGTGCACGATGCGTCCCCAGTGAGGCGGGAAACGAGCCAAGCTGTA
TCTCCGCGAGTACGGTGCGGAGGAGGAGCGGCCGGAGTGGCGGCGCGGCGAGTGGACGGG
CACGCGCGGCCGGCTGCCCCAGGTGGACCGCAGCCCCTCGCGCCGGAGCCCCTACCTCGC
GCGCGATGACGAGCCCTCGCCGGCGCCCGACGAGCGCGGCCGCTCCGCGTCGGCCGGCGC
CCACCACCGCGCCCGTCCGCGCCCTCTGCGCTACCAGTCCCTGGAGCGCGACTACGAGCG
CTCGTACGCGCCGCCGCCGCCGCCCGATGATGACTACTACAGACGCGAGCCGCCCCCCCT
CTTCCTGGGAGAGCTGCAGTCCCAGAACACGGACCTGCAGCGGGAACTGGGCAACCTTAA
GAAAGAACTCGAATTGACCAATCAGAAGCTCGGCTCCAGCATGCACAGCATCAAGACCTT
CTGGAGTCCCGAGCTCAAGAAGGAGCGGGCGCTGAGGAAAGAGGAAAGCGCAAAGTACAG
CCTCATCAATGACCAACTTAAACTGCTCAACCAAGAGAACCAGAAACAAGCTATGCTGGT
GAGGCAGTTAGAAGAGGAACTTCGACTTCGAATGAGGCAGCCCGCTCCCGAACTACAACA
GCAGTTGGAACAACTATTCGCCGAGAACGAACACCTGCAGAGAGAGATAGCTATATTGAG
GGACACTATTAAAGAATTGGAACTACGGATCGAGACTCAGAAGCAAACGTTGCAGGCGCG
AGATGAGAGCATCAAGAAACTATTGGAAATGCTACAAAACAAAGGCATGGGTAAAGAAGA
AGAACGGCAAATGTTCCAACAGATGCAGGCGATGGCGCAAAAACAGGAGCTCAAGGCGAC
GGCGGACACGCTGCGGGCGCTGCAGGCGCAGCTGGAGCGCGCCCTGGCCGCGGCTGGCCT
GCCGGGCGGCAGTGCGGGGGCCACGCTCACCGCCGTGCTCGAGACCAAGGAAGCGCGCAT
CGCGACGCTGGAGCGCCAGGTGGCCCTGCTCGAGAGCGAGCTGGCCGCGCTCGTGTCGCC
GCCGCCGCCCTCGCTCGCGCCCTCCCACGCCTCGCTATTCGATAAGGCCGACCCTCCCTT
CAAGAGACAACTGGACGAATTCCGGTTGGAGATACAGAGACGAGACCAGGAGATCCTGGC
GATGGCTGCTAAGATGAAAGCCTTGGAGGAACAGCACCAGGATTACCAGAGACACATCGC
CGTGCTGAAGGAGTCTCTTTGTGCTAAGGAAGAACATTATAGTATGCTGCAGACTGATGT
TGAAGAACTTAAAGCAAGACTGGACGAGAAAAGCAGGGTGGTGGAAAAGAAGACGGCAGC
AGCTTTAGCCGCGGCTCATGAACTCGCTGAACTGAGAGACCATTCCGAGATCAAGGATAG
GAAGATCAACGTGCTCCAAAGAAAGATCGAAAATCTGGAAGATCTGCTAAAAGAAAAAGA
TAATCAAGTTGATATGGCAAGAGCTAGATTAAATGCAATGCAAGCACACCACTGCACTTC
TGAAGGTGCACTCTCTTCTCTTGAAGAAGTGATAGGAGACAAAGAAAAGCAAATCCAACA
ACTCAGAGAACAAAGAGATAGAGCCGAACATGAGAAAAACGAGGAAAGAGAACTTCACGA
AAGAGAAATAGCAGAATATAAAATGAAACTACACGCTTTAGAAAGTGAAGTTGAAAAGCT
TGGGGCTAGGCTTGAAAGAGCCCAGGCAGAGAAAGATAGACTCGAAGCCAAACTAGAAAG
CTCACAGTCCGAGCTAGGTAAATCTAAAGCCGAGTTAGACAAAGCTGCAAGTGAAGTGGG
TCGCTCCGGTGCTGATTGGGAAGCCGCTAAACAACGCCTCGCAAGACTTGAATTAGAAAA
TGAGAGACTCAAACATGAACTAGAAAGATCCCAAACTACCTTCGGAAGAAGTACTTTATC
TACCTCTCAAGAGCTTGATCGTATCCAAGAAAAAGCTGATAAGAATGCTACAGAGTTGAG
ACGCACTCTAGCTGAGTTGAGAGTGACTCAAGCTGATGCTGAAAGAGCAAGGGTAGAAGC
CAGTGGGTTGCAAGATAAGTTGGAGAAGTCACAAGGTGAAGTTTATCGTCTGAAAGCCAA
GTTGGAAAATGCACAAACTGAACAAGACAGCTTGAAGGAAGAGTACGATCGGGTCCAATC
TTCAATAAGCCGTCTCCACTCAGAGAGAGACAAAGCTATAGCAGAGTTAGACAAAGCAAG
AGAAGAATTAGAGCGAACTCAAGCTACTCTAGGCAAAGCACAGCTTCAACAAGACAAGCT
GCAAGCTTCCCTCGACACAGCTCACTCGGAAATCGACAAGCTGCAAGAGAAGCTGGATAA
ATCTGCTGTTGAAGTCAGAAAACTCCAAGTGGATCGTGAGAAGCAAGCGTACGATTTCGA
ATCCCTACAATCCCAATTGGACAAGGCGTTGGGTCAGGCTGCCAGGCTTCAGAAAGAAAG
AGATACAGCTCAGCTGGACGCAGAGAGATTCCGTGACAAGAATGAGAAAGCGCAGAACCT
AGTGACTCGCATCCAGAAAGAAAGAGACACAGCATTAGCCGACGCTGCCAGTTGTCGGGA
GCGAGCCGAGGCTGCCGCTGCTGCTGCCAACAGAGCCGCCAGGGATCGAGATAGTGCTGC
TACTGAGCTTGACGTCCTTAGGGAACGATGGGAGAAGGCGCATCAACAGCATCAAAAGTT
AACGATGGAACGAGACGATGCCCTGACAGAACTGGAAATACTGAAAGAAAAACTGGATAA
GGCACTTTACTCCTCACAGAAGACAATAGAAGAAAAAGAAACGGCGCACAAAGAATATGA
GAAGATGTTAGAGAAATATGATAGGTCCCAGAATGAAATATACAGACTACAAAATAAGAT
AGAAATCTTAGAAGCAGACAAGGACAGACTCGAATTGGAACTAGAGAAGCAAGCACACGT
ATCCACGAAGTTCAGAGACGACCAAAGGAAACTTCAAGACGAACTATCCAGAGTTCAGGA
AATGTATGACAGAGCATCGCTGCAGTTGGGCAGAACTAAAGAACTGGAAGAGAAAGCAAA
GGAAGATATGGACAGAATGAGTGTTGACATTGAAATGGTCAGAGAAAGATACGAAAAGAG
CCAAATCGAACTTAGAAGATACCAAGCTGAAAAGGAAACGTTATTGGCAGATAAGGAGCG
ACTACAATTCGAATACGATAGAGCTATGACCCAATGTGGTAAAGCTCAGGCTTCCAACGA
AAAAACACAAGAAGAAATGGCACGAGTCCAAATCGAACTCGAGAAAATGTACGACAAACA
TGATAAAGTCGCCTCCGAATTAAGAAGAGTGCAGGCTGAGCTAGACAAAGTGAAGCAAGA
TGCTAGTGGTGCTAGAGAAGAGGCCGAACGGTACGCCGCTCGGTATGGGAAGTATCATGA
CGCTAAAGAAGAACACGAGAGAACTAAGATTGAAGTGGACAGACTAAGGACACGCCTAGA
GAAGACCACATTAGACCTGGAACGAGCTCGCAAGGCTGAAGAAGAGGTCTCCCGTCTGCG
GTCCGAACTTGAACGAGTGGAAGGTGTACGAGGTAAATACCAATTCGAACAGGATAAATG
GACCAACGAACTAAACAAGATGCAAGCGGAGATCGATAAACATCGCGAGAGATACGAAGC
GGCACAGGCTGACGTCAGCCGACTGCAAGCTGAGAAAGAACAAGCGGAGACCAAACTGCA
CGAAATGAACATTCAATTGGAATTATCCAAGAGTGAAGTCGTCAAGTTGACAGCAGCATT
AGAAAAACAACGAACAGAGTTAGAACGTGCTCATATTGAGTGTGAAAAGTTCAGAGATCG
ATGCGAAAAACTTAAGTTACGTTCAGACCAACTAGATAAAGATAATGAGCGACTCAAGGG
CGAGTTACAGCAGATTGAGAGAATGAAACTGCAGGCAGTCGCTGGTGATAAAGCAAGAAC
CGAAGACAGACTCGAAATTGAACGCCTTCGTGATAAATTAGAAAAAGCTATACAGGCTCG
TGATGCTACAGAAATGGAGGCCGGACGATTGGCTAAAGAACTTGAAAAGTCTCAGATGCA
TCTCGCTAAATATCAGGAAACAAACGAAACAACTCGTGTTGAATATGATAGAATGACGAA
TGAACTGGGAAGAATGCATGAACGACTTGAACGAACGATTCTAGAAATGAGACAAATTGA
ACAAGAACGAGATGCACTGAGAGCTGAGATTCAAAATACTAGACGTAATATCGAACAGCA
ACAGCGAACATTGGATCATAGAACTCAAGAAACGTTAGTAAAACTACAACAAGAACTTGC
CCAGTCGGTTCGCGATAGAGAAAAGATGGCATCCATTTTGGAACAGAGAGATAAACAAGC
TGACGCTATTGAAAAACAAATAGTCAAATTAGAGGCTGATACAAAACAATTGACAATAGA
ACGTGACCAACTAGTGGCACAATTAGAAAAATCTCAGGATATGCTAGTAAACTTCCAGAG
AGAACTAAATGCTTCCGAAGCAGAACTACAGAAACAACGAGACGAAGTACGTAGACTGAA
AGAAGAACAGAGAAAGCTGGCACAAGACTCAGAACGAGGTGCAAAATCGGTCATCGAAAA
TCGAGAGAGAGAGATAGCAAGACTTCAACAGCAAATGCAAGGCCTTACAAAAGAAAGAGA
CACAATAAAACAACGCGCAGAAAAAGAAGCACAAAAGGTCGGAGAGCTCGACAAATGGCG
GGCAGCTGTCGAAGCGGAGAAAGCAAAGGCAATCGGAGCAGAAAAAGCCTTATCCGAATG
CCAACAACGATTACAGAGTTTGGAGAAACAATTCCAGGCACAGCATCAACAGTTACAGCA
GCTCCAAGCACGAGGGCCTTCCGACGTACGCGAAGTTCAGAAGCAGCTTGAAGCGGCTCA
GAACGAGGCCCGAGCTCTTGCCACGGAGAGGGAACGATGCCAGTCACAGTTGGAGATGCT
CGTTCAAGAATTGGAAAAGAGCCAGCTCGATCTCCGCGAAGCGAACAAGAAACTGCAAAC
AGCTGGTGTACAGAACGCGAAAGCTGGGGAAGACGCCGCCCAAGCTAAACGGCAGATACA
AGACGAATTCAAAAAGTTAGAAGACGCAAGAAAACACTTCGAAGAACAAAGAAGAACGTG
GGAGAACAAACGGAAAGACGTGGAGGAGAAGGAGAAGGCGCTCACGGAATTGGATCGACA
GTTGAAGAAGAGAAAAGAGCAAATGGACCAAATGGAAGCATCCTTGAGGAAGGCTGGTGG
AAGCACAGCCGCGGCATCGGAACTTAACCGCAAGCTGACAGACTCTCAGAAAGACGCCGA
ACAACTAAAAGCGCAGTTAGACCAAACAAAAGAGGAGGCGAAACGATTGACAACAGAAAC
AGAACGCCTGTTACAACTAGTGCAGATGTCGCAGGAGGAACAGGCGCAGAAAGAGAAACA
GATTATGGATTTGCAACAGTCCGTAAGAAACCTCCAAGCCAAATTAAAAAGTCAGCAACA
AGCACAAGCACAAAGAGAAGAGGCCGGACCCGCTGGCTTCCTCAAAAGCTTTTTCTAAGT
TAATCTTCGCACCAAGACTGTCCTTAATTTATTTGCTCTTTTCATTTTATAATTTTTCTT
CAACCGTCTCAATACTATAAGTGTCCTCTTATGCTCCACGTCTTTCTAATAGTTCACGTA
TTTAAAGTGTTCAGAATATATTTTAACGATCCTCCCAAATGTATTTAGAATGATGTAATC
AGCACACATATTAGTTTAGCGTTAAAATGTTAAGTCATGTTTAAATATTATCGTGTTCAG
CGGAAACTTATTTTTTAAGTAAAGTTAAAGGAAATGTCATAAATATTCATGTATCTAGAT
AGATGAGTGAGTGTCCACTAGCCATTGTTATTCTGCTTTCAAACTTGTTATGCGTATATC
AATTCTAATATAATGAATATTAAATATACGTTAACCTTTCTAGACTTATTTTCATTTCGT
TTTATACTATTTTTCTGTTGAAGTAAAATACTTTTTTGTTTTAATTTATTTTTCTTTTCT
TCTCTGTTGACCCCTATCGGTAGGACTTGAATAGAGCCAGGCAAAGCGAAATAGCGGCTA
TTGAGGATCTAACAAAGACGTTGTCAGAAAAAGATCGTCTCAAATCAAAGCTGGAAGACA
GTAAAATGAAGATCATAGATCTTGAGATAGAACTAAACGAATCGTCTTTGATACTTTCCG
AGATCTTGAAAATATCCGATAGCCAGGAGCTGACGAATATAAAGAGAAGCAAAAGCTTTT
TTGAATTGCAAAAGAGTGGTAAGGTAGTGGATAGGTTAGATAGAGGCAGGTTTAGTAGGA
GTGATAACGCTCTTGATGCTATACATAAAGACAAAAAAGAGTCACCAAACGTTAGCAAAC
TAATGAGAAAGGTTACCAACTTGACTAAAGAGATAGCTATAAAAAACTCGAAAATTATTG
AGCAACAAAGATGCATCTCAATACTAGAAGAAGCATTAAGAGAAAACAATAATATAGCAG
AGTTTGAGCAATTGTTAGCGGTAGTTAGGAGTAAGGATGAGAGGATTAATGAATTAGAAA
GATATGTTAATGAAAATTGTGGAGTTCATTCAACGGATTGCAAAGATAAGAGAATAATGG
AGCTGGAAGAGGCTTTGAAGGAATCTTTCATGGTGGCAGCGGAAAGAGAAAAGGTGTTTT
ATAATGAAGAGCAGCAACGAATTGAGACTTTACAAAAGATGAAGAAGATGGAACAAAGAT
TACTGTCGCTTCAAAATGCTTCAGCGCTGAGTTGTGAAACTTGCACCTCGGTTTTGAAAC
GAATGAAGCTTCTGGAAGATTCGCTATTAGACTGCCAGAGAAAGCGGGACTATGCATTGC
GGCAGCTAGCACACGCGATACAAGAGATCCTAGAAGCAGCTATAAGCGAAAAGGACTCTC
ATATAGCTGAGCTTGAGATGAAAGGAGTGCTGGACGAGAACGAGACAAAGATATGCGACT
CTTTAAAGAGTGAAAGGGACAGGCTGCTCAATAGACTTAAAATAGAGAACGAAAGAATAG
TCGACATCGAAAGACAATTGTACCAGGCCATCATGAAAGCTGAAGAGCTGGGCTCAGTTC
CAGTAGGACTGACATTGGCTGATGAGTACATCGGCATCGAGGACAATGCAATTGTCTGGG
TAACTACAACACGAGGTATTTGGAATGGTTTGAATTACGAATTAAATGTGCCAAAAACGA
AGGTAGAACGAAAAAATCTTTCAATATATTTAAAATATATTGTTTTTAATTAACCGTTTG
TGTCTTCAAAAATTTACTACCTTTTTCTTAAATGCCTTAACTTCTTGTCTTTCATAGTTC
CATCATATAAAGTGCCTGTTATACTTTCATGCATTTTCAACGGGTTCTTACCACGAAAGT
GCCTGTTATTAAAA
(7514 bp)

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