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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3318c0_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_early_endosome_antigen_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0030054 C cell junction
GO:0030426 C growth cone
GO:0042734 C presynaptic membrane
GO:0043005 C neuron projection
GO:0045202 C synapse
GO:0048786 C presynaptic active zone
Transcript
Level		FPKM:3.64 TPM:3.57
ORF EntryO_TrvaFAMAMG2231_complete:A_TrvaFAMAMG_TR3318c0_g3_i1
Sequence
(Nucleotide)
GAGTATCACGACCTCTCCATGTACTGTGTAGCGGTCATGTGTTCATCAGTCTCTCTCACA
GTAACGGTAGATCAATGTATCACAACCTAGGCGCCCGTGCATTCCAACATGTGTTCTGTC
GAATCACTCTTCGATACATTAGCTAGTAAATCTGGGAAACTTTCTGGTTGCTCAACGAAG
CTTCAGAAACTCCTTTAATTAGTATATAGTAAAGAAAGTTTTCCAGCGAGAATTATTATA
ATTAAAGTGTCCATTAGTATATGACGATCGATAGGGTTAATAAAGACGTTCAGCATTGGA
CTGAAATGTTAGCATGTCGAATTTATATTGTCGATAATTTGTTAGCTATTATCGGAATGT
CTTCCACGGCACTGTTAATATTAAATATCGTGTGTTCAATTATAGTGCTGGAAACATTTC
GTAATATAATAATAACCGAAGCTTGCGTTCATATAACAACATCTATAGCGCGACTGACAT
GTAATATACTATCAAGCTCAACGTTAATAAGTAGTATAATATATTTAACATCAGAATCAT
TACATCACTAACGCCTGGTAGATAGTTTTTTTCTATTTATCGTGGTGGATCGTTGTTCTA
CTAATCTTTTTGAATTCTGATTTCTCATCGAATTTGCGATGGATGGGTTATGACGCAGCT
GGACGAATTCCGGTTGGAGATACAGAGACGAGACCAGGAGATCCTGGCGATGGCTGCTAA
GATGAAAGCCTTGGAGGAACAGCACCAGGATTACCAGAGACACATCGCCGTGCTGAAGGA
GTCTCTTTGTGCTAAGGAAGAACATTATAGTATGCTGCAGACTGATGTTGAAGAACTTAA
AGCAAGACTGGACGAGAAAAGCAGGGTGGTGGAAAAGAAGACGGCAGCAGCTTTAGCCGC
GGCTCATGAACTCGCTGAACTGAGAGACCATTCCGAGATCAAGGATAGGAAGATCAACGT
GCTCCAAAGAAAGATCGAAAATCTGGAAGATCTGCTAAAAGAAAAAGATAATCAAGTTGA
TATGGCAAGAGCTAGATTAAATGCAATGCAAGCACACCACTGCACTTCTGAAGGTGCACT
CTCTTCTCTTGAAGAAGTGATAGGAGACAAAGAAAAGCAAATCCAACAACTCAGAGAACA
AAGAGATAGAGCCGAACATGAGAAAAACGAGGAAAGAGAACTTCACGAAAGAGAAATAGC
AGAATATAAAATGAAACTACACGCTTTAGAAAGTGAAGTTGAAAAGCTTGGGGCTAGGCT
TGAAAGAGCCCAGGCAGAGAAAGATAGACTCGAAGCCAAACTAGAAAGCTCACAGTCCGA
GCTAGGTAAATCTAAAGCCGAGTTAGACAAAGCTGCAAGTGAAGTGGGTCGCTCCGGTGC
TGATTGGGAAGCCGCTAAACAACGCCTCGCAAGACTTGAATTAGAAAATGAGAGACTCAA
ACATGAACTAGAAAGATCCCAAACTACCTTCGGAAGAAGTACTTTATCTACCTCTCAAGA
GCTTGATCGTATCCAAGAAAAAGCTGATAAGAATGCTACAGAGTTGAGACGCACTCTAGC
TGAGTTGAGAGTGACTCAAGCTGATGCTGAAAGAGCAAGGGTAGAAGCCAGTGGGTTGCA
AGATAAGTTGGAGAAGTCACAAGGTGAAGTTTATCGTCTGAAAGCCAAGTTGGAAAATGC
ACAAACTGAACAAGACAGCTTGAAGGAAGAGTACGATCGGGTCCAATCTTCAATAAGCCG
TCTCCACTCAGAGAGAGACAAAGCTATAGCAGAGTTAGACAAAGCAAGAGAAGAATTAGA
GCGAACTCAAGCTACTCTAGGCAAAGCACAGCTTCAACAAGACAAGCTGCAAGCTTCCCT
CGACACAGCTCACTCGGAAATCGACAAGCTGCAAGAGAAGCTGGATAAATCTGCTGTTGA
AGTCAGAAAACTCCAAGTGGATCGTGAGAAGCAAGCGTACGATTTCGAATCCCTACAATC
CCAATTGGACAAGGCGTTGGGTCAGGCTGCCAGGCTTCAGAAAGAAAGAGATACAGCTCA
GCTGGACGCAGAGAGATTCCGTGACAAGAATGAGAAAGCGCAGAACCTAGTGACTCGCAT
CCAGAAAGAAAGAGACACAGCATTAGCCGACGCTGCCAGTTGTCGGGAGCGAGCCGAGGC
TGCCGCTGCTGCTGCCAACAGAGCCGCCAGGGATCGAGATAGTGCTGCTACTGAGCTTGA
CGTCCTTAGGGAACGATGGGAGAAGGCGCATCAACAGCATCAAAAGTTAACGATGGAACG
AGACGATGCCCTGACAGAACTGGAAATACTGAAAGAAAAACTGGATAAGGCACTTTACTC
CTCACAGAAGACAATAGAAGAAAAAGAAACGGCGCACAAAGAATATGAGAAGATGTTAGA
GAAATATGATAGGTCCCAGAATGAAATATACAGACTACAAAATAAGATAGAAATCTTAGA
AGCAGACAAGGACAGACTCGAATTGGAACTAGAGAAGCAAGCACACGTATCCACGAAGTT
CAGAGACGACCAAAGGAAACTTCAAGACGAACTATCCAGAGTTCAGGAAATGTATGACAG
AGCATCGCTGCAGTTGGGCAGAACTAAAGAACTGGAAGAGAAAGCAAAGGAAGATATGGA
CAGAATGAGTGTTGACATTGAAATGGTCAGAGAAAGATACGAAAAGAGCCAAATCGAACT
TAGAAGATACCAAGCTGAAAAGGAAACGTTATTGGCAGATAAGGAGCGACTACAATTCGA
ATACGATAGAGCTATGACCCAATGTGGTAAAGCTCAGGCTTCCAACGAAAAAACACAAGA
AGAAATGGCACGAGTCCAAATCGAACTCGAGAAAATGTACGACAAACATGATAAAGTCGC
CTCCGAATTAAGAAGAGTGCAGGCTGAGCTAGACAAAGTGAAGCAAGATGCTAGTGGTGC
TAGAGAAGAGGCCGAACGGTACGCCGCTCGGTATGGGAAGTATCATGACGCTAAAGAAGA
ACACGAGAGAACTAAGATTGAAGTGGACAGACTAAGGACACGCCTAGAGAAGACCACATT
AGACCTGGAACGAGCTCGCAAGGCTGAAGAAGAGGTCTCCCGTCTGCGGTCCGAACTTGA
ACGAGTGGAAGGTGTACGAGGTAAATACCAATTCGAACAGGATAAATGGACCAACGAACT
AAACAAGATGCAAGCGGAGATCGATAAACATCGCGAGAGATACGAAGCGGCACAGGCTGA
CGTCAGCCGACTGCAAGCTGAGAAAGAACAAGCGGAGACCAAACTGCACGAAATGAACAT
TCAATTGGAATTATCCAAGAGTGAAGTCGTCAAGTTGACAGCAGCATTAGAAAAACAACG
AACAGAGTTAGAACGTGCTCATATTGAGTGTGAAAAGTTCAGAGATCGATGCGAAAAACT
TAAGTTACGTTCAGACCAACTAGATAAAGATAATGAGCGACTCAAGGGCGAGTTACAGCA
GATTGAGAGAATGAAACTGCAGGCAGTCGCTGGTGATAAAGCAAGAACCGAAGACAGACT
CGAAATTGAACGCCTTCGTGATAAATTAGAAAAAGCTATACAGGCTCGTGATGCTACAGA
AATGGAGGCCGGACGATTGGCTAAAGAACTTGAAAAGTCTCAGATGCATCTCGCTAAATA
TCAGGAAACAAACGAAACAACTCGTGTTGAATATGATAGAATGACGAATGAACTGGGAAG
AATGCATGAACGACTTGAACGAACGATTCTAGAAATGAGACAAATTGAACAAGAACGAGA
TGCACTGAGAGCTGAGATTCAAAATACTAGACGTAATATCGAACAGCAACAGCGAACATT
GGATCATAGAACTCAAGAAACGTTAGTAAAACTACAACAAGAACTTGCCCAGTCGGTTCG
CGATAGAGAAAAGATGGCATCCATTTTGGAACAGAGAGATAAACAAGCTGACGCTATTGA
AAAACAAATAGTCAAATTAGAGGCTGATACAAAACAATTGACAATAGAACGTGACCAACT
AGTGGCACAATTAGAAAAATCTCAGGATATGCTAGTAAACTTCCAGAGAGAACTAAATGC
TTCCGAAGCAGAACTACAGAAACAACGAGACGAAGTACGTAGACTGAAAGAAGAACAGAG
AAAGCTGGCACAAGACTCAGAACGAGGTGCAAAATCGGTCATCGAAAATCGAGAGAGAGA
GATAGCAAGACTTCAACAGCAAATGCAAGGCCTTACAAAAGAAAGAGACACAATAAAACA
ACGCGCAGAAAAAGAAGCACAAAAGGTCGGAGAGCTCGACAAATGGCGGGCAGCTGTCGA
AGCGGAGAAAGCAAAGGCAATCGGAGCAGAAAAAGCCTTATCCGAATGCCAACAACGATT
ACAGAGTTTGGAGAAACAATTCCAGGCACAGCATCAACAGTTACAGCAGCTCCAAGCACG
AGGGCCTTCCGACGTACGCGAAGTTCAGAAGCAGCTTGAAGCGGCTCAGAACGAGGCCCG
AGCTCTTGCCACGGAGAGGGAACGATGCCAGTCACAGTTGGAGATGCTCGTTCAAGAATT
GGAAAAGAGCCAGCTCGATCTCCGCGAAGCGAACAAGAAACTGCAAACAGCTGGTGTACA
GAACGCGAAAGCTGGGGAAGACGCCGCCCAAGCTAAACGGCAGATACAAGACGAATTCAA
AAAGTTAGAAGACGCAAGAAAACACTTCGAAGAACAAAGAAGAACGTGGGAGAACAAACG
GAAAGACGTGGAGGAGAAGGAGAAGGCGCTCACGGAATTGGATCGACAGTTGAAGAAGAG
AAAAGAGCAAATGGACCAAATGGAAGCATCCTTGAGGAAGGCTGGTGGAAGCACAGCCGC
GGCATCGGAACTTAACCGCAAGCTGACAGACTCTCAGAAAGACGCCGAACAACTAAAAGC
GCAGTTAGACCAAACAAAAGAGGAGGCGAAACGATTGACAACAGAAACAGAACGCCTGTT
ACAACTAGTGCAGATGTCGCAGGAGGAACAGGCGCAGAAAGAGAAACAGATTATGGATTT
GCAACAGTCCGTAAGAAACCTCCAAGCCAAATTAAAAAGTCAGCAACAAGCACAAGCACA
AAGAGAAGAGGCCGGACCCGCTGGCTTCCTCAAAAGCTTTTTCTAAGTTAATCTTCGCAC
CAAGACTGTCCTTAATTTATTTGCTCTTTTCATTTTATAATTTTTCTTCAACCGTCTCAA
TACTATAAGTGTCCTCTTATGCTCCACGTCTTTCTAATAGTTCACGTATTTAAAGTGTTC
AGAATATATTTTAACGATCCTCCCAAATGTATTTAGAATGATGTAATCAGCACACATATT
AGTTTAGCGTTAAAATGTTAAGTCATGTTTAAATATTATCGTGTTCAGCGGAAACTTATT
TTTTAAGTAAAGTTAAAGGAAATGTCATAAATATTCATGTATCTAGATAGATGAGTGAGT
GTCCACTAGCCATTGTTATTCTGCTTTCAAACTTGTTATGCGTATATCAATTCTAATATA
ATGAATATTAAATATACGTTAACCTTTCTAGACTTATTTTCATTTCGTTTTATACTATTT
TTCTGTTGAAGTAAAATACTTTTTTGTTTTAATTTATTTTTCTTTTCTTCTCTGTTGACC
CCTATCGGTAGGACTTGAATAGAGCCAGGCAAAGCGAAATAGCGGCTATTGAGGATCTAA
CAAAGACGTTGTCAGAAAAAGATCGTCTCAAATCAAAGCTGGAAGACAGTAAAATGAAGA
TCATAGATCTTGAGATAGAACTAAACGAATCGTCTTTGATACTTTCCGAGATCTTGAAAA
TATCCGATAGCCAGGAGCTGACGAATATAAAGAGAAGCAAAAGCTTTTTTGAATTGCAAA
AGAGTGGTAAGGTAGTGGATAGGTTAGATAGAGGCAGGTTTAGTAGGAGTGATAACGCTC
TTGATGCTATACATAAAGACAAAAAAGAGTCACCAAACGTTAGCAAACTAATGAGAAAGG
TTACCAACTTGACTAAAGAGATAGCTATAAAAAACTCGAAAATTATTGAGCAACAAAGAT
GCATCTCAATACTAGAAGAAGCATTAAGAGAAAACAATAATATAGCAGAGTTTGAGCAAT
TGTTAGCGGTAGTTAGGAGTAAGGATGAGAGGATTAATGAATTAGAAAGATATGTTAATG
AAAATTGTGGAGTTCATTCAACGGATTGCAAAGATAAGAGAATAATGGAGCTGGAAGAGG
CTTTGAAGGAATCTTTCATGGTGGCAGCGGAAAGAGAAAAGGTGTTTTATAATGAAGAGC
AGCAACGAATTGAGACTTTACAAAAGATGAAGAAGATGGAACAAAGATTACTGTCGCTTC
AAAATGCTTCAGCGCTGAGTTGTGAAACTTGCACCTCGGTTTTGAAACGAATGAAGCTTC
TGGAAGATTCGCTATTAGACTGCCAGAGAAAGCGGGACTATGCATTGCGGCAGCTAGCAC
ACGCGATACAAGAGATCCTAGAAGCAGCTATAAGCGAAAAGGACTCTCATATAGCTGAGC
TTGAGATGAAAGGAGTGCTGGACGAGAACGAGACAAAGATATGCGACTCTTTAAAGAGTG
AAAGGGACAGGCTGCTCAATAGACTTAAAATAGAGAACGAAAGAATAGTCGACATCGAAA
GACAATTGTACCAGGCCATCATGAAAGCTGAAGAGCTGGGCTCAGTTCCAGTAGGACTGA
CATTGGCTGATGAGTACATCGGCATCGAGGACAATGCAATTGTCTGGGTAACTACAACAC
GAGGAGGAGGACATCCCAGGGACGGTACTGTGACATCGGACAAAGCTAAGTCGAAAACCT
GAATGTTTTTGTGACTATAGCATCATAGCACAATCCATAATCCATCCGCTACCTTACCAT
TGCTTATCACTCTTGCCTACTTATCGAAAATATCACCGACCGACTTATCAGTCAAGAAAG
TGTATATAACCTTTTTATTTTTTAATTTTTACTTTTTAATTTATTTAGGACTTTTTAGAT
ACTCCTTAATAAATCGATATTATAAAGTGTTATTTGAATTATTATTTTATAAATTGTTAA
CTATGACGTTTGATTCGACAAATAAACCAAA
(7111 bp)

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