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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3305c0_g3_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_protein_ubi-d4_A-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0002230 P positive regulation of defense response to virus by host
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007399 P nervous system development
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0046872 F metal ion binding
GO:0071565 C nBAF complex
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:3.06 TPM:3.00
ORF EntryO_TrvaFAMAMG2185_complete:A_TrvaFAMAMG_TR3305c0_g3_i3
Sequence
(Nucleotide)
AAGGAACTTCGTTCTATCCGGATGTCCCGTGACCTCTCAAGTTTTTTTAAACAATTTAGT
ACTTAATTCATTATTATTTTGCTGTCTGTACACTACTTTTGTATTACCTAAATTCCAGTT
CTGTTGAGCAATTATTGAAATATTGTAAAGAGTATGTTATTAATACTATTTTCAATATTA
TAATAATAATTAGTCATTGAATATGTGACATCTGAACTCTCTTAAACACATTATTTATTT
ATTGTATTTAAACTGTATAACATATCTTTCAATCTGCATTATTTTCACTCAAAAATTCGT
CAAATATTTTTGTAACAATTTGAAAACTTTACTGTATAAATTCTATTGTATAATTTTCCA
AAATTTCTGCATTCAAAATTTGTATTTTTCGGACGCTTATTATTATCATAAGATCTATGC
GAGTCGACACTACGTAATATAATCTATTTTATTTATTTTTAAAAAAGCCGAATTTGCGTG
TACCTAAATATAATTTTTCTAGTTAATTTTTCTTTGACAGTGACAGTTTAGATAAAGACA
GAAAGTGTCAAGTTCAGTGTTGCCATTACTTGATAGAAAAAAATAATTATAGTGACACCA
ATTTAGATAAATAATATTAAGAATTTAGCTGTATCTTTTTAAGTGAATTATCTGCCAATT
TAGTCTAGATTTTTTTAATTTTACAAAGTTGTTTTTATTCATAAAAATGGCAACACTCCG
AATTTTGAGGGTCTGTTATTTACCTAAACTGTTATAGACTCGCTTGTACCAAAATAAGAA
TTCACAAAATTAATTTGGATATTTGGATGAAAAGATATATTGTAGTGTAGTAATTTACGT
TTTTTTTACTTTGTTCATGACAATGTTGGGCCCAATTCAAATTCTAATCATTTCAAACCA
TGAGATTAAAGTTACGTATTTAACGTTAACACCTTTGAAGAATCCGAATTTCGATAAATT
AACTTGTAATTGCGAATATTACGATGATGTTGCACTAGCTTACATAAATTGATAACATTT
TATTATATTCAACACATCAATTAAAACAATAAATCACCACATAGATCACTAATGATCCAC
GCAGCAGTGAAGGGGTTAACATTGATAATTAACTTTTAAGGTAGACTTATATCAAATTTT
TAACCCATTTACTGTTAGCACATAAGTTCTGGTCAAGGTGTAAATTTTAGATAAATTTTC
ATTTTCCTTTGCATTCATATTTTTTGTATAATCTAATTCAACCTTAGACATTAGGGTATG
CAGTGCCTATTTTCTTGCATCAGTTGCACGCCACAACCATAAATGACCCAAAACGCATTA
AAACTACCATTAAAAATTCGCTCATCTTCAAAGGTGTTAACATGTTATTCTAACCCTGCA
AGTACAAGCGAGTCCGTCACGTGTCAGTGTTGAAGGGTTAATGTCGCCTCCGTGACTTAC
GTTCGCATCCGTAGGGCTTCTCCGCATCGCCGGGAACCTCGTAGGGAAGGGTGCCTTGAC
CGGCGCGCCTTCTGCCACGACCAGCGCGACCCCTCTTGGCTGGAGTATCATCAGGCTGGG
ACTTCCTAGTGCGCCCTCCCCTGGAGCCAGGGCCGGTGGGAGTGGCCCCGCCGCGTCGCT
TGCGTCTGTTTGCGTAAGTATCGTCGTAGTAATCCTCATCAGACTCCGCTTCTGGTTCCT
CTCCCGTCTCCATTTCCTCCATAGCTAGTTCATCGTAGAACCATTCCTTTGGATCATCTT
TGGCAGCAGTCTGTGAACCATCTCTGCTGTCGTCTCCGCCCAAAGCATCGGGTAGACCTG
AGCTGTTCTCCCCGTCTCCTGTGTTATCAGCTAGATCCGCTGCCCGATTCCAGCCCCATC
TTGTGGATGACATTGTTAGGTATTGACGACGAGCTTTCCGCCATCTTTGTGCTGGATATG
TGTAGACCTGTCCCTCTTTCTGACCAGGCATGCGCTGTCTTCTCGTCATAAATAAATTGC
AGTGGCTTTGGGCGACACCGGTTTGTGTGTCGATGAATGGCATACGCATCCTCCTTTCCG
CACATAGTCGCGAGTTGAACGTCGAGGAGTTCTCAATAATCTCTTTGTAGCTCGGGTCAT
GGAGAAAACTTTCGATTTTTGATAAATTTTGAGGATTTACTATCTGAATCTCAGCCGCCG
CCATTTTACTAGCCG
(2175 bp)

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