SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3303c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_formin-binding_protein_1-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005802 C trans-Golgi network
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0006897 P endocytosis
GO:0006914 P autophagy
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0016023 C cytoplasmic vesicle
GO:0016192 P vesicle-mediated transport
GO:0031410 C cytoplasmic vesicle
GO:0043547 P positive regulation of GTPase activity
Transcript
Level		FPKM:29.56 TPM:28.97
ORF EntryO_TrvaFAMAMG2173_complete:A_TrvaFAMAMG_TR3303c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTTTATCTTACATTTTTATTTTATAGAAAAATTATATACG
TTCATTCATCCTTCGCCACCTATAAATACATTAACTATACGTTCCTCGCATACAGCAAAT
ATTCAGAAAATAGCATTAGCTAATTACGACATTTAGCTAGCATTTACAACTAGATACTGT
AAATTTATTAATAACATAAGCATTATACAATAATTTTATGTGATATCGGATACATTACTC
GAAGTCAGTTTATAAAGTCTCATTGTTTCTTAACAAATTTAATAATATACATTTCACTTA
ACAACTTCATATTTGTATTTTTGCTATAATTTCATATGATGAATCACATAAACGAAAATA
ACTATCGTAAGTACAAAAAAATATATCCTTAACACTTAAAAGGCTGGCACAATGAAAATC
TAGACGAGTTACACGTTACAATTAAAGTTTATCCTAAACGCGGCGCACGTCGTACAATAT
GTACGCCATACACCCAACAATATACACAATAAATATATCATGGAATGTTATTATGATTTT
AGTCCATTCAAGTCCTTAATCGTCGCCAAGTATTCGATTACATAAAAAAATAATGCTAAT
ATTTTTCATTACGATAAATTATAGCAAAAATATGTTATTATATAGGCCACGAGAACATTA
TATTAGAAGGCGTTTAGAGCGTGCACTCGGCACTGAAGGCGCGCTCGACACGAGACACGT
GACGTCACTCGACACGCGCTCCCGGCCACGGACACAACGCGGGGACCTCGTGTCATCTCA
CTCGCACACACGGCGGGAGCGACGCTGTACCGTGCTAGTGTTGCGCGTCGGAGTAGAGCG
TGGTGGCTATGTAGGTGGTGGGCACGAACCCCTCCTCGCGCGTGGTGTGTCGCCGCACGC
GCGTCCACCCGTCGCCCGCGTCCGTCTCCAGCACGAGCAGCTGTTCGCCGCACTCCATAC
GCATCGTTGAACCGCTACCGATACCTTCAAAAGCGTACAACGCTTTACAATATCCGACGG
GCTGCAGGTCAGGCTCGCAGTAGTAGTAGTCGAGGTCGGAGCCGCGGTCGTCGTGGTCTC
CGTTGGCGTGGTCTGCGTGCGCGGCCGCCAGCTCTCCGCCCAGCCCCGACTCGGGGGAGC
CGCCCGCCGCGCGCACGCCCACGCCCGTACTCACTGACGACTCCGACGCTGATCGGGATA
GGGACTCGCTGTTTGAGCCGATACTAGTGGCCTGCGTGGGCGGCGCTCCGTTAGTCTTAG
CGACGGGATGTAGCGAGTTGGCCGCGTTCACCTGACTGCTCGCCTCCGCTAACAACTCCT
CGAACTTACTCAACTGTGCACGCAGCTTCTTTAGTTTATCGCAACATTCGTTTAATTGAC
CTTCTACAGTCATCGGATCACCTAACGCCGGACTCATTTCGTAGACTCCTTTCATTTTCA
TAAGACCTTCCATTGCGGCTTGCTCTTGCGCAACCTGTTTACTAAGCTCGAGTACTTTAG
CTTGTAGTTTCTTTTTCTTTTGATTAGGTGGCAAATCTGAATAATCCTCCTTTCCATCGG
TAGACATGTTGTTCTTATTAGAGCTGAATATGGAGAGCAGTCCTGTTCGTTTCTTGAGTT
TGTTCCCTGAGACGGTGCCTCGCGAGGCGGTGAGGTGGTTGTGCGTGGGATGGTGCGGCG
CGGCCGAGTCCGTGCTGTCCACGCCCGAGGCCAACTCGAACTGGACGTCTTCAGGAGGGA
CGAAGCCGGACTTATACCTGTCTATCACTAGTTTTGTGTCCTCTTTTTCGTTAATACTAT
TCGCGGCCTGCTCCATTCCGTCAAAGCACTGCATGATGATCGGAAATACCTTCCTCTCGA
CATCCACTGAACTCAGCATAAAGTTTTTTATATTTTTTATTCGTTTCTCGTCCAAATCTT
GTAACTGTTTAAAGACGTGCGGTAATCTCTGTTCGTAGTGCTGTCTCTGTGCTTCGTTTG
TCTTCCGTAGTTGTTCCAAGTACTCCTGTTTGGCGTCTTCGCACGCTTGACTCCGAAGCT
TCATATTCGCTTTTTGTTTCTCTAATTCTGCTCGACTTAGACTGAGGTCAGCGTCTGCTT
TCTGGAAGGTCTCGAGCGCTCTCTCCGACTCCTTCGCCGCTCGTTCGTACGCTCGCTTCG
CCCGTTCTAATGAACCTAACGAATTATTCAAAATACCCGTCTGTTTCGCTCCTTCTTGTA
AGTGTTGCTTTCTTTCCTCTCGCAATTCTTTGGCGAGTAGATGCAACTCTCTGACTACGT
TTGACTGTAGATTTTCTGCGACAACCTCCCGTTGTCCCGCGAAATCACCTAATTCTTGAA
GTAATTGTTTAAATGCTTTGCATGCTGTGTACTGATATTCATCTTCTTCTTTTCTTTTTG
GTTGATAATTTTTTACAAGCCTCCTGAGTTTTCCTGCATATTCTAGTTCTATCGCGCATC
TTTCCTTGACGAAGTTTCCGTATTTGTCTAAAAAGTCTATTCCTTTGTGTGTGTGGGCGG
CTAAGTTATCATATTGATCCCAAAGCTCAACACCCCAACTCATCTTAGTAGCAGGAAAAT
TACTTCCAATACATAAAAAAACACATTGAAGCTTCACTAACACTCAATTGTAGTAAACAC
TAAAAATTACAGAACAATTTCCACTTTTAATATTTTTTTAATCACTACCACCATTTCAAA
ACACATTCCACAAGAATAAACATGGCTGACTGACGTGACAATCTCG
(2746 bp)

- SilkBase 1999-2023 -