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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3148c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_poly(U)-specific_endoribonuclease-D_isoform_X1_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:24.55 TPM:24.06
ORF EntryO_TrvaFAMAMG2064_complete:A_TrvaFAMAMG_TR3148c0_g1_i1
Sequence
(Nucleotide)
TTAGTCAGTGTCCTACATATTACGTACTGTATATTCATTCATTCTTTGAGACTTCTGTAA
GAGATTAATGTTTTCGCAAGACGTGTTAACTAGTCTTATTTTTCTTAAACTATTGGTTCG
ATTGTGTGAGTGAACTTTCTCAAAATATCAGCCAAAATGAAGTTGTGGATAATATTATGC
TTTATATTTTTGAACACGCAGCCACAAATGGGGCGCGAATATAATAAAAATTATAATACA
GATTTTTTATTGCACGAGAGTGCTGGCAATCCTTCCACACCTAAAAGAGATAATCAAGCT
TGGTCAACCAATAGACATGTACAAATGAATGAAAATAACAATTACAACACAAACAACAAC
AACAACTATAACTCTCAATTCCCACAATTAGGGTCTACAAATAAAATTCAACCAACTTCA
AATCAGCAACCAGCACAATCGAGTGGTAAACGAGACTACGTCGCACCACAATTCACAACG
ACAAAACCTACTTCTAGTCAAATATCAAAAGCTACCCGAAACCCGAATCATAATCCTAGT
AGCAGTACACGAAATGTAACACCCCTACCTTCGACTACAAAAGCCGTACAAACCAGTCAA
CACACAACAGGAAAAGTTAAAGATCTTATTAATTTTTACGATGGTAAAGCTAAAGATCAT
AATGCCCCACAAGGTGTGCCAAGTTATAGCACAATTTTGCAAGGTACCGGTAACAACAAC
TTTCCGAGTTTGGGAACTATCGGACCAACTAAAATCACCCAGTCACATACACAAACAACT
CCAAAGCCACCAACAACTAAACCATTTAGTTACAGTTCGATAGTTTCTGGTCCAAACAAG
CCAAGCAACACACCGTCGATTTTAACTACATCAAAGCCATCTACTAGAGTACCAGTTCTA
CCAAGTTCAATATTAAATAACAATCGTGGCGGTAGTTCGCAGACCGTAACCGATGCTGAA
CTTCAAACATTAAGTGAAGATCTTTTGCGAAAAGATACAAACAATGCCGCAAAATATATT
ACAATAAATTATCAAGAAAAAACAACTTCACAATCCAAGGATGATAAGGCCCCACTTCCG
TTACTAACTATATCGCCTGCTGCTTGGAATATTCCGACAATAGAAAAATTTGTTCCTTTG
TTGGATAATTATGAAAGAGATACATTAGTAAATGAACATGTGACACCACAGGAACGTGGT
GAAGAAAATGCTTTTATGGATGCTATTATGGCTACAACTGTAATGAGACATTTAATGAAC
TTTTTAAAAGAGAAAGGCTACGTAACACCAGATCCGAAACAACAACGAGATTTTGTCAAA
CAACTTTGGTTTAGTTTGTATTCTAGGGGAAAAGGAAAAATAAGTAGCTCCGGATTCGAA
CACAGTTTTGTATCGGAGTTGAAGCACGGTGAAGTATCTGGTTTACATAATTGGATTTAC
TTTTCAAAAGAAGAAGCAATGAATCGAGCAAACTATCTTGGATATTTAAAATACAGACAA
CTCGGCGAGAAAGGAGCTGTTCTAAAATACCATTTCACACAACAAGGAGCAGATAAACCA
GTTAATTCAATGTTTATCGGTACGTCGCCTGAACTGGAAATGGCTTTATACACTTTGTGT
TTTGTAACTCGTGCGGACAATGAATGTAATTTGAAATTAGCCAACAACGATGTCAGTATA
ACAACTTATACTTTCCGTTATAGGAGTAAAAATCTCATCGGTACCGCTTATCCACAAATA
TAAGATCGTTTTGATGCAATTAAATTTAACTGCTATTTTCATTTTCTGTTAATCTGTGTG
TCTAATTGATATATTAATTGATATATAATTGATAAATGATAATACAAAATATTCTTGTAT
CATGTTCTATCGTCCTATGTACATGCATATAAAAAATATAAGAGATTATTTCTTATAACT
GATAAATATATATTTACAATACAATACAAAACTCTGTATTGAAACACCACCACCACATAT
TTATGAGGAAAAAATGGTTTATTTATGTTATAAAATTTTTAAGTTTTGCACCGGCATCTC
GTTTGTAGGAAGTAGTTCGACAGACCGTTTGAAAAATAATGTAAGTTGCCATCATTGATA
AGTTTGATTGAAATAAAAAAATTTACTACTCGTTAAAAAAAAAA
(2144 bp)

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