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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3142c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cell_division_cycle_5-like_protein_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
GO:0071987 F WD40-repeat domain binding
GO:0072422 P DNA damage checkpoint signaling
Transcript
Level		FPKM:1.03 TPM:1.00
ORF EntryO_TrvaFAMAMG2059_complete:A_TrvaFAMAMG_TR3142c0_g2_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTTTACGGTTGATTTTAACTGTATTTTATTGTTCAAGATG
ACTGTACATACACTAAAAACTCCTTCAATTAATCAATAGCATGAACTGTCTTATCTATAT
TTTTGCCTTTTCCTTTCTGCATATTTTCTACTTCAGCTTGTAGCTCTGCATATCGTTTCT
GCAACTGTTTCTCTCTTTCTGTCTGTCTATTGACATCTTCAGTCAACGACTCTATCCTTC
GTGGGATGGCTGCTTTCTCTTGTTCAGCCAAGAATTTAAACGTGGATAATTCCAAATTGG
CCTGTTCTATTTGATCTTGTAACTCCTGGAACTGTTTAATGAGGGCGGCTGCGCGACTCT
GGTACCCGCCCGTCAAAACACGAAGTTTCTTCTCCATTTTCGAACATTTCTTCGCTTCCT
TGGCCATGTGATTTCTGTTTTGTTCTAATCTTTTCTCTGCGGATTCTAAACGATCTTTTT
TTGCTTGCTAGATTAGCACGCGTGTATCTGTTTTGACCCGGTAAGAATAATACCTGTGCT
AGACATTCTTCCCATACTTGCGTATAGGCGTCAATACTGAGGTCTCCGTGTCCCATGCCG
GTCTTCACAACTTCCATTTCTTTCTTCATCGCATCCTTTGCGGCGGCTAACTCTTCGTCC
GTGAACTCTTCGTAGGGATGTTGTTCTAGATACGCTAAATGTGTTGCTTGTAATTGTACC
GCTCGCTTCTTGTCCACACCATTGGGCGGATCTCTAAGCGCGTCGTAGTGCAGCATGGTG
ACCATCTCCGCCTTGAGCAGCTCCTCGGCGTGCTGCAGCGGCGTGAGCGAGGTGGAGCCG
GCGCCGCGCAACACGGACACGTTCACGTCGCACGGACGAGCCGCGCCGCGCTGCACTGCT
GTCGAGCGACGAGACAACTCCAGCAAGCGTTTCTCCTCCTGTTCCTTTGCATATCTGGCA
TCAGCATCAGCCTGGTCCTCCACCGACATGACCATAGCCGAATCATCTCTCATTTCATCG
CCCTCCTGTTCGGGAACCACGATCTCGTAATCATTTCTCGGGACCGGCAATGACTGCAAA
GCGTTTCTGACGGATGACTTAGTTTGTTTTTGCAGTTGGCGCGAGAGTTGGGGAGTGTCG
CCTCCGCCGAGTCTGTCTTCCGGGTTAATGTTGAGTTTGTCGCGTAGTGCGGGGGTGAGA
CCGAGCTGAGCGGCGCCGTGTCCAGGTGTGTTGAAGCTGCCCGGGGTCGATACTTCACTA
CGAGTCGACCTGAATGGTGTTGCAAGCACAGTATTGGGTGTTGCCACAACCTGGCTCTGT
GGTAGTGCGCCAGAGAAATCACTCTCGTGTAGAGGAGTGTTCAGTCCACCTTTCAGTGGC
GTGTCCACGTGAGTCAGCGCCATTACATTCTGGGCTTCCATTAGGATTCTGTCGTGTTGT
TGTTGCGGCGTGCGCAGCGCTGTGGCGGGCGCGGGTGTGAGCGCGTACTGAGCAAGCAGT
GTGTCCGTAGCGCCGCCCGACGCCGCCTCGCGAGCTGCTTCCGATGCACGACCCAACTTC
ACCACTTGTTGCAGCTCTTGATCCGTAACCTGTGGCTCAGGTAATACCAGTTTGCTTCGT
TTTCTCGCCGGGGCATCGCCTTGAAGCATGGCTTGTGGTACATCATTTTCTTTAAGCTGT
TTCAACTTTTGTTTGTCCTTGCGACGTTCCCTCTCCTCTTTCTCGGAATGTAGTTCACCA
TCAAGATGTTGTTGTCGAAGTCTCGTAAAGTCCGGAGCCATCGGATCAACAACCTCAGTT
GATGTATCATAGAAACCGGAGGCTGGTCGCTTTTCAAATGGTATCTCAGTATTGTAGTCA
ACACCACGCTTCTTCTTGCGCCTGAGAGGCACAGCTATGCCTGCAGCACTAAGTTCTCTG
CGCTTCTGTAGTGCTGCGAGACGTCGGGCTTCTTCCAGTTGCTTCTCCCGAGCCTTCCTT
TTAGCCTTCTTACCTTGAGTGTTTGCCAAACGAGCACGAGCTTCCGAAAGCATCTCAAGT
TCATCTTCATCCATATCCTTAGGGTCAGGTCTAGCCGGTTTTGTCTCAGGATTGGGGTCA
ATCTCACCAGGTTTCAGTTTACGAGGATCATCACCCATATCCTCCCCTTCCTCTTTCTTC
TGAGCTTGATCTAGCAAATATTCGTATCTTTCCAAACATTGTGCTGCAGTTCGTCCTATG
ATGGGAGCAATGGTCCTCCATTGAGTGGGCATCAACTTTGCCAAGTGTAACAACTTCTCG
TCCTCTTCTCGCGACCATTCTGTCTTCTTAATGCTGGGGTCTAACCACTCGTACCAACGA
GCTTTACACTGCTTGGCCGATTTGCGGTGCAATAATGATGCTATACGGGACCATTGGTTT
TTTCCATATTTCATAACAGCCGCTTTAAGGATTTCATCCTCGGTGTTGCGCCAAACGCCA
CCCTTTATCATTATCCGGGGCATGATGAATCCAAGTTTTAGACCACCTTATGCAGTAATG
TAATTCAATGTATTTAGTTCAGTAAATATTATAGGTTGCTTCACGTAAAAGTGCTAACAC
AACGTCTTCATTTTCTAAATATTTATTTCAAGAAATAAACAGGGCACTGAATTTTAGCCA
CAATTTTAGCGAAACAGAG
(2659 bp)

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