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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3142c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_cell_division_cycle_5-like_protein_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0008380 P RNA splicing
GO:0016020 C membrane
GO:0016607 C nuclear speck
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
GO:0071987 F WD40-repeat domain binding
GO:0072422 P DNA damage checkpoint signaling
Transcript
Level		FPKM:17.47 TPM:17.11
ORF EntryO_TrvaFAMAMG2058_complete:A_TrvaFAMAMG_TR3142c0_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTTTACGGTTGATTTTAACTGTATTTTATTGTTCAAGATG
ACTGTACATACACTAAAAACTCCTTCAATTAATCAATAGCATGAACTGTCTTATCTATAT
TTTTGCCTTTTCCTTTCTGCATATTTTCTACTTCAGCTTGTAGCTCTGCATATCGTTTCT
GCAACTGTTTCTCTCTTTCTGTCTGTCTATTGACATCTTCAGTCAACGACTCTATCCTTC
GTGGGATGGCTGCTTTCTCTTGTTCAGCCAAGAATTTAAACGTGGATAATTCCAAATTGG
CCTGTTCTATTTGATCTTGTAACTCCTGGAACTGTTTAATGAGGGCGGCTGCGCGACTCT
GGTACCCGCCCGTCAAAACACGAAGTTTCTTCTCCATTTTCGAACATTTCTTCGCTTCCT
TGGCCATGTGATTTCTGTTTTGTTCTAATCTTTTCTCTGCGGATTCTAAACGATCTTTTT
TGCTTGCTAGATTAGCACGCGTGTATCTGTTTTGACCCGGTAAGAATAATACCTGTGCTA
GACATTCTTCCCATACTTGCGTATAGGCGTCAATACTGAGGTCTCCGTGTCCCATGCCGG
TCTTCACAACTTCCATTTCTTTCTTCATCGCATCCTTTGCGGCGGCTAACTCTTCGTCCG
TGAACTCTTCGTAGGGATGTTGTTCTAGATACGCTAAATGTGTTGCTTGTAATTGTACCG
CTCGCTTCTTGTCCACACCATTGGGCGGATCTCTAAGCGCGTCGTAGTGCAGCATGGTGA
CCATCTCCGCCTTGAGCAGCTCCTCGGCGTGCTGCAGCGGCGTGAGCGAGGTGGAGCCGG
CGCCGCGCAACACGGACACGTTCACGTCGCACGGACGAGCCGCGCCGCGCTGCACTGCTG
TCGAGCGACGAGACAACTCCAGCAAGCGTTTCTCCTCCTGTTCCTTTGCATATCTGGCAT
CAGCATCAGCCTGGTCCTCCACCGACATGACCATAGCCGAATCATCTCTCATTTCATCGC
CCTCCTGTTCGGGAACCACGATCTCGTAATCATTTCTCGGGACCGGCAATGACTGCAAAG
CGTTTCTGACGGATGACTTAGTTTGTTTTTGCAGTTGGCGCGAGAGTTGGGGAGTGTCGC
CTCCGCCGAGTCTGTCTTCCGGGTTAATGTTGAGTTTGTCGCGTAGTGCGGGGGTGAGAC
CGAGCTGAGCGGCGCCGTGTCCAGGTGTGTTGAAGCTGCCCGGGGTCGATACTTCACTAC
GAGTCGACCTGAATGGTGTTGCAAGCACAGTATTGGGTGTTGCCACAACCTGGCTCTGTG
GTAGTGCGCCAGAGAAATCACTCTCGTGTAGAGGAGTGTTCAGTCCACCTTTCAGTGGCG
TGTCCACGTGAGTCAGCGCCATTACATTCTGGGCTTCCATTAGGATTCTGTCGTGTTGTT
GTTGCGGCGTGCGCAGCGCTGTGGCGGGCGCGGGTGTGAGCGCGTACTGAGCAAGCAGTG
TGTCCGTAGCGCCGCCCGACGCCGCCTCGCGAGCTGCTTCCGATGCACGACCCAACTTCA
CCACTTGTTGCAGCTCTTGATCCGTAACCTGTGGCTCAGGTAATACCAGTTTGCTTCGTT
TTCTCGCCGGGGCATCGCCTTGAAGCATGGCTTGTGGTACATCATTTTCTTTAAGCTGTT
TCAACTTTTGTTTGTCCTTGCGACGTTCCCTCTCCTCTTTCTCGGAATGTAGTTCACCAT
CAAGATGTTGTTGTCGAAGTCTCGTAAAGTCCGGAGCCATCGGATCAACAACCTCAGTTG
ATGTATCATAGAAACCGGAGGCTGGTCGCTTTTCAAATGGTATCTCAGTATTGTAGTCAA
CACCACGCTTCTTCTTGCGCCTGAGAGGCACAGCTATGCCTGCAGCACTAAGTTCTCTGC
GCTTCTGTAGTGCTGCGAGACGTCGGGCTTCTTCCAGTTGCTTCTCCCGAGCCTTCCTTT
TAGCCTTCTTACCTTGAGTGTTTGCCAAACGAGCACGAGCTTCCGAAAGCATCTCAAGTT
CATCTTCATCCATATCCTTAGGGTCAGGTCTAGCCGGTTTTGTCTCAGGATTGGGGTCAA
TCTCACCAGGTTTCAGTTTACGAGGATCATCACCCATATCCTCCCCTTCCTCTTTCTTCT
GAGCTTGATCTAGCAAATATTCGTATCTTTCCAAACATTGTGCTGCAGTTCGTCCTATGA
TGGGAGCAATGGTCCTCCATTGAGTGGGCATCAACTTTGCCAAGTGTAACAACTTCTCGT
CCTCTTCTCGCGACCATTCTGTCTTCTTAATGCTGGGGTCTAACCACTCGTACCAACGAG
CTTTACACTGCTTGGCCGATTTGCGGTGCAATAATGATGCTATACGGGACCATTGGTTTT
TTCCATATTTCATAACAGCCGCTTTAAGGATTTCATCCTCGGTGTTGCGCCAAACGCCAC
CCTTTATCATTATCCGGGGCATGATGAATCCAAGTTTTAGACCACCTTATGCAGTAATGT
AATTCAATGTATTTAGTTCAGTAAATATTATAGGTTGCTTCACGTAAAAGTGCTAACACA
ACGTCTTCATTTTCTAAATATTTATTTCAAGAAATAAACAGGGCACTGAATTTTAGCCAC
AATTTTAGCGAAACAGAG
(2658 bp)

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