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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3004c0_g1_i9
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:0.60 TPM:0.59
ORF EntryO_TrvaFAMAMG1948_complete:A_TrvaFAMAMG_TR3004c0_g1_i9
Sequence
(Nucleotide)
AAATTTTTCACTTGCATAAGTACTGAGCCAAATAAATAAAATCAACTCAACAACACAAAA
TCTGTGGTCAACAAATAATTCGTGGTTTGATTGATTTTACAGTACTACAAAAAATAAATT
GTTTTTTTAAAGTAGTGTAATGTTTTTCGATACGTTTCTGTGAAAAGAAGAGGTAATAAT
TCTGTAGAAAAGAATAAGAAGGCAAAAATTGTTTGGCATATTAATTAACAAGTTGAAGAT
TATTCTTTACTTCTAATGAACAAACTTCCCGATTGGTGCAACGTTATCATTTCGATAGTA
GTTATTATTACTTGGCTACACACAATTTATTTGAGTTGGAAGTTGTCTGAAATTGTAGAA
TAATGCCACTCACAGCTGATGTTGCAGCACAGCAAGTGCAGGAGAGATTAAGATCATTAC
ACAGACTAGTTTACGACATTGAGGCAGAGAGAAATCGCAATGAGCAATGCATAGATGCTA
TACTTCGAGCAGAAAAGGCAACAGAGTCCCCGTCAAGTGCTGATGAATCATCTGGATCAT
CACAACAGAATTCTCAGTTAAAAAGTTTGTACAAAGCTGGTCTCACTGCTGCTGAGCAAG
AGGAACGACTTTTGAGAGCTGCACTCTCTCGGATATATGAAATTCGCGCCATTAAGAATG
AACGTCGGATTCAGGCTCGTCACGCCGGTAACAAGGAGACGATCGGATGCGGTGCGCTAA
TGAAGCTCCTGCTAAGCGCGGCTCAGACGTTACCGCTGCACGTGGGTCGAGCGGGCGAGC
GCGCGCCGCCGCTGTGTGGCGCGGTGCCGGCCGACGCAGGACACGTGGCGCGAGCGGGGG
ACGCCGTCGCCGCACTCGTCAGAGTCTCCGATAATGAGGATAACTGGATATTAGCTGAGG
TGGTGAGTTGGCTCCCCGCCCAGGGTAAGTACGAGGTGGACGACATCGACGAGGAACAAA
AGAACCGTCACGTGCTCAGCAAGCGACGCGTGGTCCCGCTGCCGCTCATGAGGGCCGACC
CGCGCACTGACGAACACGCGCTTTTCCCTAAAGGTGCTGTTGTGATGGCTTTATACCCGC
AAACGACGTGCTTCTACCGAGCCGTCGTCAACAGGCTTCCCGCTAGCGCTGCTGATCCTT
ACGAAGTTCTATTTGAGGACTCATCGTACGCAGACGGTTACTCCCCGCCGGAGCGCGTGG
CTCAGCGCTACGTGATCGCCATCAAGGAGGGCAAGGGACGCGCCACCTGATGTCGTCCGC
AGCGCCCGCCCGCCGCCGCGCCCGCGCCCTCGCCGCTGCCGGATGGGGTACTCGAGGTGT
TGCCGGACGGACGCGTGGCGGTGGGTGCTCCGCCGGCTGCCGCGCAGCCGCCGTCTGCCG
GCTCGCTGCCCGTCCTCAACGACACTCCGTATTGCTCCGATTGTAATCGATACATTGTGG
GCGTGTTCGTGCGCATCAAGGACAAGAACCTCCACGTGGAGTGCTTCAAGTGCTCAACAT
GTGGATCGTCGCTGAAGAACCAGGGCTACTACAACATAAACGGCAAACTGTACTGCGACA
TCCACGCCAAGCTGGTCGCGCGTCAGAACCCGCCCGCACCTAACTTGGACCCCGTCACTG
TGCCACCTGGTGGCCGAGTACCGAACAACACATACTCCACGCCTCTGCCTCCACTTGCTA
CCAACAACTACACTAATGGATCATCTTCTCTATTCAGTCCATCAAGCAATCTGTCTGGTC
CGAAGCCGTTCGGTTCTTCGGTGGGCTCGGCGTACTCCCCGTCCTTGTCGCCGCGCTCGG
CGCCGCTATCCCCCGCACGGCCCGTCCCCGCGCCCGCCCCGCAGTCCCCGGCGAGACCCG
TGGCCGCGCCCGTCTCTGCGCCCGCACCGCCATTCGCACCCGCACCCTTCGCTCCCAAAC
GGCCAGTATCCGTTTTTAAAGGTTCCAGTGTAGGGGCTCCCACTCGTGGTAAAACTTTCG
GAGTTTCATCGGCACCAAAACGAGGAAGGGGAATTTTGAATAAGCCTGCTCTGCCCGGCT
CTCGTGTACCACTTTGCGGATCTTGTAATGGAAATATTAGGGGACCATTCATCACGGCTC
TTGGACGCATATGGTGCCCTGAACACTTCATCTGCGTGAATGCAACATGTAGACGCCCGC
TGCAAGATATCGGTTTCGTCGAAGAGAACGGACAACTCTACTGTGAATTCTGTTTCGAGC
AATATATAGCACCAGCATGTGACAAGTGTCATGCCAAAATTAAAGGCGATTGCTTAAATG
CTATCGGCAAACATTTCCACCCGGAATGCTTTAACTGCGTCTATTGTGGAAAGTTGTTCG
GAAATAATCCATTCTTCTTAGAAGACGGACTACCCTACTGCGAAGCAGACTGGAATGAGC
TCTTTACCACAAAATGTTTTGCTTGCGGATTCCCCGTGGAGGCGGGCGACAGGTGGGTCG
AGGCGCTCAACAATAACTACCACAGTCAGTGCTTCAACTGCACGGTCTGTAAAAAGAACC
TCGAAGGACAGAGCTTTTTCGCCAAGGGAGGGCGACCTTTTTGTAAAACGCACGCCCGTT
AAAAGTCCAATCAAAATAATTTACAACTCAGACACTGTTTATTCGACGACTACTTTCCGT
CCCGTTTCACCGTCGCCGATCACACCGCCTGCGATAAGTACACCGTCCCCACAGAGAACC
AGGAAGTTGGAAACGCCCCTCCACTTCGATGGAGGACTGTTTTCCGACATACGAAGTACA
GATGGCAAATTACTTAGCAAAGTAACAGTCGACAGAGTGCAACGTTCCACGCACCATGAC
GTCACCGACTCACCAAGTACTGTTGAAATTAATGACAAGAACTACGTCGATGATATAGTA
AAATCTGAGACTATTATTAATCAAGATATAATCACGGTCAAATTCACCCCAGTCCCACCT
GAATTCGATTCCTCCGATTTATTAACATCACAAACAACGAAGCGATCTAAGACACCTATA
CCATATCTTAAAGATGACTTTGCCGACTTGCAAAGCTATAAAATAGTCAATTCTATATGT
AAAGAAAAACTATTAGAATCAAGTACTTTACAGACAGATTCTGCAGAAATATCTCGAAGA
TCAAGATCTGCAGAAGTCGAGAGCAGTACTTTGGCTAAGTTTGTGAAGGCTATGAGCAAC
GAAAAGGAGACTAATGATATAGAAACAATAACGAAAGAATATGACATACCAATAAAAGTA
GAATCTTCTTCGTTGTCGCATTTACTCGAAAATCCGATAGACAAAAGACCTTCAAGTGTG
AGCCGTGAATTAGACCACTTTTTGAATGTAGACCTATCAAAGATAGAAAGAAGTGTTAGT
CCTTTACCGAACTTCTCAGTCACAGATCATCTGACAAAAATCAACAGTTACTTGCAGGAG
AGCCTTGACGCCTGCAATGGAAAAGATATTGAAAAGCGGTGTACTTCTAATATTACGCAC
GGAAAAGAGGAAATAAAACATGAATACTTCTCTTCTCATCTAACTGAAACCGTCAAAAAT
AATGTTCAGAGTAAAGAATCGGAGATTAATGTTGCAGACAGTATTAGAAAAGAGAATTCT
TTTAATTCTAACCTCCAAAATTTAACGACATCGGTCGGAAATAATGAAAATAAAGAGCTT
AAGATAAGCAAGACAAAACTAAACAGTGTCCGGGAAGAACGACCATCAGTTTTACATGCT
ATAAAAAATATGCCAATACATTATCACGCAGCGATTTTGTGTATTTTCTTAATTGTATAT
AACTTTATATATCAATATATTAAACAAAATTGTCAAGGGAATAAAAAATAATATAGATGT
ACGATTGTTCAATTAAATTGTATGCGTTAAACTAGTCATTGCAAAATACTATTCATAGGT
ACATGGTGTATCAACTAGTTATATGAATGGTTTTAATTATAGATCAGGATGTAAATAGTC
ACGTAACAACCTTCACATTATTTAATCTAAATTATCTAAAATTAACATTTTGACGCTTTT
TCACAATTGTGACGATTGACAATCCCTTCTTAAAAGCTTTGTACACAGCTTCGGAATGTT
TCAAAAATACTACTAACGTTAACATCTGTAAGTTATTTTTTTTAGATTCATTATTTATTT
ATTATTGGTGCACCAATTTCGTATTTAAAAAAATGTATTTTATCATCAAATGTTAATCGA
TTAGACTCGAAATTGCCATGTAGATTTATGACGAATTTTAAGAGTATTCGAATTCATAAA
ACTGTTGATTAACAGTGCATGAGTACCTAATGTTAAGTTTAATAATTGTATACATTTTTA
TACCTATTAATTTAGACTTACGAAACTGCATTATCACATTTTATGATTATGTGAGCTTAA
TAAAATATTTAATTTTATAAAAAAAAAAAAAAAA
(4414 bp)

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