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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3004c0_g1_i8
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:0.62 TPM:0.61
ORF EntryO_TrvaFAMAMG1946_complete:A_TrvaFAMAMG_TR3004c0_g1_i8
Sequence
(Nucleotide)
AAATTTTTCACTTGCATAAGTACTGAGCCAAATAAATAAAATCAACTCAACAACACAAAA
TCTGTGGTCAACAAATAATTCGTGGTTTGATTGATTTTACAGTACTACAAAAAATAAATT
GTTTTTTTAAAGTAGTGTAATGTTTTTCGATACGTTTCTGTGAAAAGAAGAGGTAATAAT
TCTGTAGAAAAGAATAAGAAGGCAAAAATTGTTTGGCATATTAATTAACAAGTTGAAGAT
TATTCTTTACTTCTAATGAACAAACTTCCCGATTGGTGCAACGTTATCATTTCGATAGTA
GTTATTATTACTTGGCTACACACAATTTATTTGAGTTGGAAGTTGTCTGAAATTGTAGAA
TAATGCCACTCACAGCTGATGTTGCAGCACAGCAAGTGCAGGAGAGATTAAGATCATTAC
ACAGACTAGTTTACGACATTGAGGCAGAGAGAAATCGCAATGAGCAATGCATAGATGCTA
TACTTCGAGCAGAAAAGGCAACAGAGTCCCCGTCAAGTGCTGATGAATCATCTGGATCAT
CACAACAGAATTCTCAGTTAAAAAGTTTGTACAAAGCTGGTCTCACTGCTGCTGAGCAAG
AGGAACGACTTTTGAGAGCTGCACTCTCTCGGATATATGAAATTCGCGCCATTAAGAATG
AACGTCGGATTCAGGCTCGTCACGCCGGTAACAAGGAGACGATCGGATGCGGTGCGCTAA
TGAAGCTCCTGCTAAGCGCGGCTCAGACGTTACCGCTGCACGTGGGTCGAGCGGGCGAGC
GCGCGCCGCCGCTGTGTGGCGCGGTGCCGGCCGACGCAGGACACGTGGCGCGAGCGGGGG
ACGCCGTCGCCGCACTCGTCAGAGTCTCCGATAATGAGGATAACTGGATATTAGCTGAGG
TGGTGAGTTGGCTCCCCGCCCAGGGTAAGTACGAGGTGGACGACATCGACGAGGAACAAA
AGAACCGTCACGTGCTCAGCAAGCGACGCGTGGTCCCGCTGCCGCTCATGAGGGCCGACC
CGCGCACTGACGAACACGCGCTTTTCCCTAAAGGTGCTGTTGTGATGGCTTTATACCCGC
AAACGACGTGCTTCTACCGAGCCGTCGTCAACAGGCTTCCCGCTAGCGCTGCTGATCCTT
ACGAAGTTCTATTTGAGGACTCATCGTACGCAGACGGTTACTCCCCGCCGGAGCGCGTGG
CTCAGCGCTACGTGATCGCCATCAAGGAGGGCAAGGGACGCGCCACCTGATGTCGTCCGC
AGCGCCCGCCCGCCGCCGCGCCCGCGCCCTCGCCGCTGCCGGATGGGGTACTCGAGGTGT
TGCCGGACGGACGCGTGGCGGTGGGTGCTCCGCCGGCTGCCGCGCAGCCGCCGTCTGCCG
GCTCGCTGCCCGTCCTCAACGACACTCCGTATTGCTCCGATTGTAATCGATACATTGTGG
GCGTGTTCGTGCGCATCAAGGACAAGAACCTCCACGTGGAGTGCTTCAAGTGCTCAACAT
GTGGATCGTCGCTGAAGAACCAGGGCTACTACAACATAAACGGCAAACTGTACTGCGACA
TCCACGCCAAGCTGGTCGCGCGTCAGAACCCGCCCGCACCTAACTTGGACCCCGTCACTG
TGCCACCTGGTGGCCGAGTACCGAACAACACATACTCCACGCCTCTGCCTCCACTTGCTA
CCAACAACTACACTAATGGATCATCTTCTCTATTCAGTCCATCAAGCAATCTGTCTGGTC
CGAAGCCGTTCGGTTCTTCGGTGGGCTCGGCGTACTCCCCGTCCTTGTCGCCGCGCTCGG
CGCCGCTATCCCCCGCACGGCCCGTCCCCGCGCCCGCCCCGCAGTCCCCGGCGAGACCCG
TGGCCGCGCCCGTCTCTGCGCCCGCACCGCCATTCGCACCCGCACCCTTCGCTCCCAGTT
CCAGTGTAGGGGCTCCCACTCGTGGTAAAACTTTCGGAGTTTCATCGGCACCAAAACGAG
GAAGGGGAATTTTGAATAAGCCTGCTCTGCCCGGCTCTCGTGTACCACTTTGCGGATCTT
GTAATGGAAATATTAGGGGACCATTCATCACGGCTCTTGGACGCATATGGTGCCCTGAAC
ACTTCATCTGCGTGAATGCAACATGTAGACGCCCGCTGCAAGATATCGGTTTCGTCGAAG
AGAACGGACAACTCTACTGTGAATTCTGTTTCGAGCAATATATAGCACCAGCATGTGACA
AGTGTCATGCCAAAATTAAAGGCGATTGCTTAAATGCTATCGGCAAACATTTCCACCCGG
AATGCTTTAACTGCGTCTATTGTGGAAAGTTGTTCGGAAATAATCCATTCTTCTTAGAAG
ACGGACTACCCTACTGCGAAGCAGACTGGAATGAGCTCTTTACCACAAAATGTTTTGCTT
GCGGATTCCCCGTGGAGGCGGGCGACAGGTGGGTCGAGGCGCTCAACAATAACTACCACA
GTCAGTGCTTCAACTGCACGGTCTGTAAAAAGAACCTCGAAGGACAGAGCTTTTTCGCCA
AGGGAGGGCGACCTTTTTGTAAAACGCACGCCCGTTAAAAGTCCAATCAAAATAATTTAC
AACTCAGACACTGTTTATTCGACGACTACTTTCCGTCCCGTTTCACCGTCGCCGATCACA
CCGCCTGCGATAAGTACACCGTCCCCACAGAGAACCAGGAAGTTGGAAACGCCCCTCCAC
TTCGATGGAGGACTGTTTTCCGACATACGAAGTACAGATGGCAAATTACTTAGCAAAGTA
ACAGTCGACAGAGTGCAACGTTCCACGCACCATGACGTCACCGACTCACCAAGTACTGTT
GAAATTAATGACAAGAACTACGTCGATGATATAGTAAAATCTGAGACTATTATTAATCAA
GATATAATCACGGTCAAATTCACCCCAGTCCCACCTGAATTCGATTCCTCCGATTTATTA
ACATCACAAACAACGAAGCGATCTAAGACACCTATACCATATCTTAAAGATGACTTTGCC
GACTTGCAAAGCTATAAAATAGTCAATTCTATATGTAAAGAAAAACTATTAGAATCAAGT
ACTTTACAGACAGATTCTGCAGAAATATCTCGAAGATCAAGATCTGCAGAAGTCGAGAGC
AGTACTTTGGCTAAGTTTGTGAAGGCTATGAGCAACGAAAAGGAGACTAATGATATAGAA
ACAATAACGAAAGAATATGACATACCAATAAAAGTAGAATCTTCTTCGTTGTCGCATTTA
CTCGAAAATCCGATAGACAAAAGACCTTCAAGTGTGAGCCGTGAATTAGACCACTTTTTG
AATGTAGACCTATCAAAGATAGAAAGAAGTGTTAGTCCTTTACCGAACTTCTCAGTCACA
GATCATCTGACAAAAATCAACAGTTACTTGCAGGAGAGCCTTGACGCCTGCAATGGAAAA
GATATTGAAAAGCGGTGTACTTCTAATATTACGCACGGAAAAGAGGAAATAAAACATGAA
TACTTCTCTTCTCATCTAACTGAAACCGTCAAAAATAATGTTCAGAGTAAAGAATCGGAG
ATTAATGTTGCAGACAGTATTAGAAAAGAGAATTCTTTTAATTCTAACCTCCAAAATTTA
ACGACATCGGTCGGAAATAATGAAAATAAAGAGCTTAAGATAAGCAAGACAAAACTAAAC
AGTGTCCGGGAAGAACGACCATCAGTTTTACATGCTATAAAAAATATGCCAATACATTAT
CACGCAGCGATTTTGTGTATTTTCTTAATTGTATATAACTTTATATATCAATATATTAAA
CAAAATTGTCAAGGGAATAAAAAATAATATAGATGTACGATTGTTCAATTAAATTGTATG
CGTTAAACTAGTCATTGCAAAATACTATTCATAGGTACATGGTGTATCAACTAGTTATAT
GAATGGTTTTAATTATAGATCAGGATGTAAATAGTCACGTAACAACCTTCACATTATTTA
ATCTAAATTATCTAAAATTAACATTTTGACGCTTTTTCACAATTGTGACGATTGACAATC
CCTTCTTAAAAGCTTTGTACACAGCTTCGGAATGTTTCAAAAATACTACTAACGTTAACA
TCTGTAAGTTATTTTTTTTAGATTCATTATTTATTTATTATTGGTGCACCAATTTCGTAT
TTAAAAAAATGTATTTTATCATCAAATGTTAATCGATTAGACTCGAAATTGCCATGTAGA
TTTATGACGAATTTTAAGAGTATTCGAATTCATAAAACTGTTGATTAACAGTGCATGAGT
ACCTAATGTTAAGTTTAATAATTGTATACATTTTTATACCTATTAATTTAGACTTACGAA
ACTGCATTATCACATTTTATGATTATGTGAGCTTAATAAAATATTTAATTTTATAAAAAA
AAAAAAAAAA
(4390 bp)

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