SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3004c0_g1_i6
Scaffold_id
NCBI non-redundant
(nr)		putative_adaptor_protein_enigma_[Operophtera_brumata]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:2.52 TPM:2.46
ORF EntryO_TrvaFAMAMG1940_complete:A_TrvaFAMAMG_TR3004c0_g1_i6
Sequence
(Nucleotide)
CGCACCCGCACCCTTCGCTCCCAAACGGCCAGTATCCGTTTTTAAAGGTAATTTAATTAC
AATTAAGAATAAATGCAGTTCAGCTTAAAATGGCTAAATTTGTATTATTGATTTGTAAAT
ATTTATTACACAGAAAGTGTGAATGCGCTAAGCGTCCATGAATGTTACTCGCAGCTCTAA
ACTATCTCCTGGCACCAAATATCTTCAAGATCATAATAAATAACTACTGGCAAAAACCAC
TGCTGAAAGCTATCGATTAAGTTTTTAACATTCTCGCTTCATTAAAATAAGTTTGCAGTT
AGTACTATAGCTCACTTATTTATGTTTGAAGGCTTACAATTTCACTAATTTTTACTTTCA
TCTATTTCTCCTTTCCCATATTCATCACCAACCTAAATAATGCTAACAGATCAAAATGTT
AAAAGTATTGTGTGGCCTCCTCCTGCAAATGCTCTAGAAGATGAACCACCTAAATATGAA
ACCCTAAATAACAATCCCAAGGAACGCCAGAAAGAATTGATAACTAGACAAGTCATAACA
CCTGACTTTACTAATAATGACGGCAGAAACCAAATAGCCACCAGCATTCAGAACCAAATG
TCAACATCCGCTCAGCAAAAGCAAGAAAGTTCATCCAGTGTCTCGTACTCTACCGCGGTG
TCTTCTGCGTCGATGTCTTCTCATTCTAAATCTGAATCTATTATGAATAATTCTCAGGCT
CAAATCGTTCAAGAAACAACTAGTTGCGCAATACAATCTTTTTCACAAGAATCATCTTCT
ATGAGTCAAAACCTCGTTTATCATACCAGCGCAGATAAACAAAAGTCGGCCGTTGATAGT
ATTCAAAAAGCTGAATCTCTCAGTGCCGAAACACGTCAAATTGAGATGAGGTCCGAAAAT
TTTTCAAATATAAGTAGTGCTCAAATAACCGGATTCTTAAATCAAAAACCAGAAAATACC
AACGAAAACCAACCAAACCAAAACCAAGAAAATCAAGGTCTATATTATTTCAACGAAGGA
AACTTACTTAAAACAGTAACAAGTAAAATGCATGAAAAGCATTTCGCGGAAACGGAATCA
AGCTCTTTCGTTGAATCACAGAATTCTAATCAGAATCCATCACTATACTTAAGTGAAAAT
GCTAAACAAATAAATAACAACGTGAAAGATTCTATGGTTGAAGCTTTAACAATAGCACCA
GACAGACCTTACTCACCATTGTCGATACCAGCGCAACAGTTAAATATCAGAAGAGAAGAA
TTTCATACGGAGAAGAATGAATCATCTAATCCAACTGTTCAGACAAAATTACTTGAGCAG
AATCAGCAACAACGAATTCAGCCATCTCCTTTATTTATGCAACAACAGAAACGAGCTATT
ACTCCCATTCCTCCTATCAAAACATTTAATCCACCTGAAAAGACACCAACTCCAATTACA
ATGCCACCTGAAACTACTCCATATATTCCTGAAGACTTCAAGATAACTGTAGAGCCAAAG
ATAGATCGTAATGCAACATCGTCTCCTTTTGTGGAGGCTCTAACCACTGCTCCTGAACGT
CCTTATACACCTGTGAATATGAATACTCAATCTATTGAGAGAGGTTCTTTAAGAGACGCC
TTAACCATCGCTCCAGATCGACCTTACAGTCCTCTTCCCGTAAATACAATAAATCAAATT
AACCACTCATCTACATCAAGTCTTCTGCTACAGACTACAGCTTCTGAAATTATCAAACCT
GTGGCAACTCAATCTTTTAACAACCAATATACAACTCAAATACATACACAATATTCGAAT
ATGCAAAACACATATAATTTACAGTCGTCATCTGAGGCATCTGCATTTAAACCGATCAAG
CAAGGATCAATACCTACTCAACCGCAAGTTACCTCCAACTATTCCGCTGCTCCTAGTTAT
AATGAAACGAGTTATCTAACATCTGAAAAAAATTCGCAAGCAATAATAATGTCAGAGTCA
TCTACTTTACAGAAAGCTGCCAAAACGAGTAGTGGCTATTCATCTGTAAAATCTGCTCAA
AACTACTTCGAACATCTTGACAAAAAGGAGACTCTGTCATCACCAGCAGTACGATCAAAA
TCTGGATTACATAAGCCTGATGACATACCACCTTATCAAAAACATTTTGAAAAACTACCA
TCACAACGTGGTATCTCGCCAGATACGTACAAAGAAAGACCGGTATTGCAAAAACCAGTG
ACACCTACGACTGATCCTCCAAATAAACAAAGAGAAAAATCTAAAGAACCGAAGGATTAC
GCTCCCAAGTATTCAGATGTGTCAGCTCCACTTAATAATCCACAGAACCCAACACCTGCA
TACTATCAAACAATAACACAACATCAACCATCCAACCAAACATCTGTGCAGTTTCATAAA
GACACACCTATTACAATGACGTTTCAACCAGTTACTGATGATAATTATATGAGAAGTTCG
CCCATTCGTAGCAGACCTACAACGCCAAGTTTGATTAATAAACCGGCACCAATTATTCCT
CATTACCAAATGAATTTAGTTACAGTAGAGCATTTGGCACCAGAAAGCCATTTGTATGAT
CCTTCCAGTCCAGAGGCAAGTCGTTCACCTACACCAAAACCCAGGTCTCGATCTCCAGCA
CCAGGCCCCCCTCCGAATCCTTTAAAAGCTCATGCACCTCGTATTAGAGAATCACCTATG
CAGCAATCTCCGCACTCGCACTCATTATTAACGCAAGCGACAGCAAATCTGAGGAAAGAA
CATGAATATCAAAAACAACAACATAACGTTGAGTTTCAAGATAAAACATCGGAGAATAAA
TGGATCTCGGAACCATCTAACGTTATCAAAGAGCAGACTCATTCAAACAAAGGATACAAA
AGTGAAAACTATGCAAAAGGAAATATGTCAATTAAAGCAGATTCAATGATGGCACAAAAT
TTCGCACAAAGACAAATGGAGTCACAAAATGTTTCGGATTTCGGACATACTACGGTTCAA
ACAACTAGAAAAACTTTCGAGGAGTTTGAACATACGCAAAAAGCCAAGACAATTGAAATT
CGTAAAGGTGGTTCATCTTTTGGGGAGCAGCAGTATTTAGAGTCTAATACCCAATCCACA
CAAGTAAATGCTAAACAAGTGTTTCCATCTCCTGTTATGACATTACCTACCCAAGAAGTG
TTATCTGCCAACTCATCTAATTATCTTAATAACGATAATTCTGCAACTGCTAGTAGAAAC
ACAGGCATTTATAAGCCAAAACCTTTGAATTCTGGTGCTAACCAAGGTCCAGTGTGTGAT
CCTACCCCGTCGACAGGTTCCAGTGTAGGGGCTCCCACTCGTGGTAAAACTTTCGGAGTT
TCATCGGCACCAAAACGAGGAAGGGGAATTTTGAATAAGCCTGCTCTGCCCGGCTCTCGT
GTACCACTTTGCGGATCTTGTAATGGAAATATTAGGGGACCATTCATCACGGCTCTTGGA
CGCATATGGTGCCCTGAACACTTCATCTGCGTGAATGCAACATGTAGACGCCCGCTGCAA
GATATCGGTTTCGTCGAAGAGAACGGACAACTCTACTGTGAATTCTGTTTCGAGCAATAT
ATAGCACCAGCATGTGACAAGTGTCATGCCAAAATTAAAGGCGATTGCTTAAATGCTATC
GGCAAACATTTCCACCCGGAATGCTTTAACTGCGTCTATTGTGGAAAGTTGTTCGGAAAT
AATCCATTCTTCTTAGAAGACGGACTACCCTACTGCGAAGCAGACTGGAATGAGCTCTTT
ACCACAAAATGTTTTGCTTGCGGATTCCCCGTGGAGGCGGGCGACAGGTGGGTCGAGGCG
CTCAACAATAACTACCACAGTCAGTGCTTCAACTGCACGGTCTGTAAAAAGAACCTCGAA
GGACAGAGCTTTTTCGCCAAGGGAGGGCGACCTTTTTGTAAAACGCACGCCCGTTAAAAG
TCCAATCAAAATAATTTACAACTCAGACACTGTTTATTCGACGACTACTTTCCGTCCCGT
TTCACCGTCGCCGATCACACCGCCTGCGATAAGTACACCGTCCCCACAGAGAACCAGGAA
GTTGGAAACGCCCCTCCACTTCGATGGAGGACTGTTTTCCGACATACGAAGTACAGATGG
CAAATTACTTAGCAAAGTAACAGTCGACAGAGTGCAACGTTCCACGCACCATGACGTCAC
CGACTCACCAAGTACTGTTGAAATTAATGACAAGAACTACGTCGATGATATAGTAAAATC
TGAGACTATTATTAATCAAGATATAATCACGGTCAAATTCACCCCAGTCCCACCTGAATT
CGATTCCTCCGATTTATTAACATCACAAACAACGAAGCGATCTAAGACACCTATACCATA
TCTTAAAGATGACTTTGCCGACTTGCAAAGCTATAAAATAGTCAATTCTATATGTAAAGA
AAAACTATTAGAATCAAGTACTTTACAGACAGATTCTGCAGAAATATCTCGAAGATCAAG
ATCTGCAGAAGTCGAGAGCAGTACTTTGGCTAAGTTTGTGAAGGCTATGAGCAACGAAAA
GGAGACTAATGATATAGAAACAATAACGAAAGAATATGACATACCAATAAAAGTAGAATC
TTCTTCGTTGTCGCATTTACTCGAAAATCCGATAGACAAAAGACCTTCAAGTGTGAGCCG
TGAATTAGACCACTTTTTGAATGTAGACCTATCAAAGATAGAAAGAAGTGTTAGTCCTTT
ACCGAACTTCTCAGTCACAGATCATCTGACAAAAATCAACAGTTACTTGCAGGAGAGCCT
TGACGCCTGCAATGGAAAAGATATTGAAAAGCGGTGTACTTCTAATATTACGCACGGAAA
AGAGGAAATAAAACATGAATACTTCTCTTCTCATCTAACTGAAACCGTCAAAAATAATGT
TCAGAGTAAAGAATCGGAGATTAATGTTGCAGACAGTATTAGAAAAGAGAATTCTTTTAA
TTCTAACCTCCAAAATTTAACGACATCGGTCGGAAATAATGAAAATAAAGAGCTTAAGAT
AAGCAAGACAAAACTAAACAGTGTCCGGGAAGAACGACCATCAGTTTTACATGCTATAAA
AAATATGCCAATACATTATCACGCAGCGATTTTGTGTATTTTCTTAATTGTATATAACTT
TATATATCAATATATTAAACAAAATTGTCAAGGGAATAAAAAATAATATAGATGTACGAT
TGTTCAATTAAATTGTATGCGTTAAACTAGTCATTGCAAAATACTATTCATAGGTACATG
GTGTATCAACTAGTTATATGAATGGTTTTAATTATAGATCAGGATGTAAATAGTCACGTA
ACAACCTTCACATTATTTAATCTAAATTATCTAAAATTAACATTTTGACGCTTTTTCACA
ATTGTGACGATTGACAATCCCTTCTTAAAAGCTTTGTACACAGCTTCGGAATGTTTCAAA
AATACTACTAACGTTAACATCTGTAAGTTATTTTTTTTAGATTCATTATTTATTTATTAT
TGGTGCACCAATTTCGTATTTAAAAAAATGTATTTTATCATCAAATGTTAATCGATTAGA
CTCGAAATTGCCATGTAGATTTATGACGAATTTTAAGAGTATTCGAATTCATAAAACTGT
TGATTAACAGTGCATGAGTACCTAATGTTAAGTTTAATAATTGTATACATTTTTATACCT
ATTAATTTAGACTTACGAAACTGCATTATCACATTTTATGATTATGTGAGCTTAATAAAA
TATTTAATTTTATAAAAAAAAAAAAAAAA
(5789 bp)

- SilkBase 1999-2023 -