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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3004c0_g1_i5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:3.61 TPM:3.54
ORF EntryO_TrvaFAMAMG1937_complete:A_TrvaFAMAMG_TR3004c0_g1_i5
Sequence
(Nucleotide)
AAATTTTTCACTTGCATAAGTACTGAGCCAAATAAATAAAATCAACTCAACAACACAAAA
TCTGTGGTCAACAAATAATTCGTGGTTTGATTGATTTTACAGTACTACAAAAAATAAATT
GTTTTTTTAAAGTAGTGTAATGTTTTTCGATACGTTTCTGTGAAAAGAAGAGATAGTAGT
TATTATTACTTGGCTACACACAATTTATTTGAGTTGGAAGTTGTCTGAAATTGTAGAATA
ATGCCACTCACAGCTGATGTTGCAGCACAGCAAGTGCAGGAGAGATTAAGATCATTACAC
AGACTAGTTTACGACATTGAGGCAGAGAGAAATCGCAATGAGCAATGCATAGATGCTATA
CTTCGAGCAGAAAAGGCAACAGAGTCCCCGTCAAGTGCTGATGAATCATCTGGATCATCA
CAACAGAATTCTCAGTTAAAAAGTTTGTACAAAGCTGGTCTCACTGCTGCTGAGCAAGAG
GAACGACTTTTGAGAGCTGCACTCTCTCGGATATATGAAATTCGCGCCATTAAGAATGAA
CGTCGGATTCAGGCTCGTCACGCCGGTAACAAGGAGACGATCGGATGCGGTGCGCTAATG
AAGCTCCTGCTAAGCGCGGCTCAGACGTTACCGCTGCACGTGGGTCGAGCGGGCGAGCGC
GCGCCGCCGCTGTGTGGCGCGGTGCCGGCCGACGCAGGACACGTGGCGCGAGCGGGGGAC
GCCGTCGCCGCACTCGTCAGAGTCTCCGATAATGAGGATAACTGGATATTAGCTGAGGTG
GTGAGTTGGCTCCCCGCCCAGGGTAAGTACGAGGTGGACGACATCGACGAGGAACAAAAG
AACCGTCACGTGCTCAGCAAGCGACGCGTGGTCCCGCTGCCGCTCATGAGGGCCGACCCG
CGCACTGACGAACACGCGCTTTTCCCTAAAGGTGCTGTTGTGATGGCTTTATACCCGCAA
ACGACGTGCTTCTACCGAGCCGTCGTCAACAGGCTTCCCGCTAGCGCTGCTGATCCTTAC
GAAGTTCTATTTGAGGACTCATCGTACGCAGACGGTTACTCCCCGCCGGAGCGCGTGGCT
CAGCGCTACGTGATCGCCATCAAGGAGGGCAAGGGACGCGCCACCTGATGTCGTCCGCAG
CGCCCGCCCGCCGCCGCGCCCGCGCCCTCGCCGCTGCCGGATGGGGTACTCGAGGTGTTG
CCGGACGGACGCGTGGCGGTGGGTGCTCCGCCGGCTGCCGCGCAGCCGCCGTCTGCCGGC
TCGCTGCCCGTCCTCAACGACACTCCGTATTGCTCCGATTGTAATCGATACATTGTGGGC
GTGTTCGTGCGCATCAAGGACAAGAACCTCCACGTGGAGTGCTTCAAGTGCTCAACATGT
GGATCGTCGCTGAAGAACCAGGGCTACTACAACATAAACGGCAAACTGTACTGCGACATC
CACGCCAAGCTGGTCGCGCGTCAGAACCCGCCCGCACCTAACTTGGACCCCGTCACTGTG
CCACCTGGTGGCCGAGTACCGAACAACACATACTCCACGCCTCTGCCTCCACTTGCTACC
AACAACTACACTAATGGATCATCTTCTCTATTCAGTCCATCAAGCAATCTGTCTGGTCCG
AAGCCGTTCGGTTCTTCGGTGGGCTCGGCGTACTCCCCGTCCTTGTCGCCGCGCTCGGCG
CCGCTATCCCCCGCACGGCCCGTCCCCGCGCCCGCCCCGCAGTCCCCGGCGAGACCCGTG
GCCGCGCCCGTCTCTGCGCCCGCACCGCCATTCGCACCCGCACCCTTCGCTCCCAAACGG
CCAGTATCCGTTTTTAAAGGTTCCAGTGTAGGGGCTCCCACTCGTGGTAAAACTTTCGGA
GTTTCATCGGCACCAAAACGAGGAAGGGGAATTTTGAATAAGCCTGCTCTGCCCGGCTCT
CGTGTACCACTTTGCGGATCTTGTAATGGAAATATTAGGGGACCATTCATCACGGCTCTT
GGACGCATATGGTGCCCTGAACACTTCATCTGCGTGAATGCAACATGTAGACGCCCGCTG
CAAGATATCGGTTTCGTCGAAGAGAACGGACAACTCTACTGTGAATTCTGTTTCGAGCAA
TATATAGCACCAGCATGTGACAAGTGTCATGCCAAAATTAAAGGCGATTGCTTAAATGCT
ATCGGCAAACATTTCCACCCGGAATGCTTTAACTGCGTCTATTGTGGAAAGTTGTTCGGA
AATAATCCATTCTTCTTAGAAGACGGACTACCCTACTGCGAAGCAGACTGGAATGAGCTC
TTTACCACAAAATGTTTTGCTTGCGGATTCCCCGTGGAGGCGGGCGACAGGTGGGTCGAG
GCGCTCAACAATAACTACCACAGTCAGTGCTTCAACTGCACGGTCTGTAAAAAGAACCTC
GAAGGACAGAGCTTTTTCGCCAAGGGAGGGCGACCTTTTTGTAAAACGCACGCCCGTTAA
AAGTCCAATCAAAATAATTTACAACTCAGACACTGTTTATTCGACGACTACTTTCCGTCC
CGTTTCACCGTCGCCGATCACACCGCCTGCGATAAGTACACCGTCCCCACAGAGAACCAG
GAAGTTGGAAACGCCCCTCCACTTCGATGGAGGACTGTTTTCCGACATACGAAGTACAGA
TGGCAAATTACTTAGCAAAGTAACAGTCGACAGAGTGCAACGTTCCACGCACCATGACGT
CACCGACTCACCAAGTACTGTTGAAATTAATGACAAGAACTACGTCGATGATATAGTAAA
ATCTGAGACTATTATTAATCAAGATATAATCACGGTCAAATTCACCCCAGTCCCACCTGA
ATTCGATTCCTCCGATTTATTAACATCACAAACAACGAAGCGATCTAAGACACCTATACC
ATATCTTAAAGATGACTTTGCCGACTTGCAAAGCTATAAAATAGTCAATTCTATATGTAA
AGAAAAACTATTAGAATCAAGTACTTTACAGACAGATTCTGCAGAAATATCTCGAAGATC
AAGATCTGCAGAAGTCGAGAGCAGTACTTTGGCTAAGTTTGTGAAGGCTATGAGCAACGA
AAAGGAGACTAATGATATAGAAACAATAACGAAAGAATATGACATACCAATAAAAGTAGA
ATCTTCTTCGTTGTCGCATTTACTCGAAAATCCGATAGACAAAAGACCTTCAAGTGTGAG
CCGTGAATTAGACCACTTTTTGAATGTAGACCTATCAAAGATAGAAAGAAGTGTTAGTCC
TTTACCGAACTTCTCAGTCACAGATCATCTGACAAAAATCAACAGTTACTTGCAGGAGAG
CCTTGACGCCTGCAATGGAAAAGATATTGAAAAGCGGTGTACTTCTAATATTACGCACGG
AAAAGAGGAAATAAAACATGAATACTTCTCTTCTCATCTAACTGAAACCGTCAAAAATAA
TGTTCAGAGTAAAGAATCGGAGATTAATGTTGCAGACAGTATTAGAAAAGAGAATTCTTT
TAATTCTAACCTCCAAAATTTAACGACATCGGTCGGAAATAATGAAAATAAAGAGCTTAA
GATAAGCAAGACAAAACTAAACAGTGTCCGGGAAGAACGACCATCAGTTTTACATGCTAT
AAAAAATATGCCAATACATTATCACGCAGCGATTTTGTGTATTTTCTTAATTGTATATAA
CTTTATATATCAATATATTAAACAAAATTGTCAAGGGAATAAAAAATAATATAGATGTAC
GATTGTTCAATTAAATTGTATGCGTTAAACTAGTCATTGCAAAATACTATTCATAGGTAC
ATGGTGTATCAACTAGTTATATGAATGGTTTTAATTATAGATCAGGATGTAAATAGTCAC
GTAACAACCTTCACATTATTTAATCTAAATTATCTAAAATTAACATTTTGACGCTTTTTC
ACAATTGTGACGATTGACAATCCCTTCTTAAAAGCTTTGTACACAGCTTCGGAATGTTTC
AAAAATACTACTAACGTTAACATCTGTAAGTTATTTTTTTTAGATTCATTATTTATTTAT
TATTGGTGCACCAATTTCGTATTTAAAAAAATGTATTTTATCATCAAATGTTAATCGATT
AGACTCGAAATTGCCATGTAGATTTATGACGAATTTTAAGAGTATTCGAATTCATAAAAC
TGTTGATTAACAGTGCATGAGTACCTAATGTTAAGTTTAATAATTGTATACATTTTTATA
CCTATTAATTTAGACTTACGAAACTGCATTATCACATTTTATGATTATGTGAGCTTAATA
AAATATTTAATTTTATAAAAAAAAAAAAAAAA
(4292 bp)

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