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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR3004c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp_[Bombyx_mori]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:0.31 TPM:0.30
ORF EntryO_TrvaFAMAMG1926_complete:A_TrvaFAMAMG_TR3004c0_g1_i2
Sequence
(Nucleotide)
GCGGCAGGGAGGTCCGACCGCGGCGAGACTCGCGACCGGCGACCGCACACTCGCGCGCCA
CAGCTCGCTGCTTACCCACGATCGAACGACCGACGCCCGCGACCGGTGTCGTATTACCGC
TCTAAATTTATCTCGCGAGCGCGATCGCCAATTTGGAAACGGTCGCGCGCCGTGTTTTGA
ACTGGTGATTGACAGTGTCGAGTGAGGAGTGCTCCCCCGAGCGACGAATATTAGCCTGCC
GACATGGCACAGTTACTAACTGTGCGGCTCAATAAAGCTGACCAGCAGCCTTTGGGCTTC
CGGTTGCAAGGAGGCAAGGACTTTGGCACGCCACTGGTCGTACAAAAGGTGAATGGCGGC
AGTGCAGCAGAGCGAGCTGGCTTGCAGGCCGGAGACGCTCTGATCCGCGTCAACAACACA
GACGTGTACACGTTACGTCATCAGGACGCACAGGACACCATCCGAGCTGCTGGTGGTAAC
CTCGAACTGACTATCCAACGTGGGGGAGGAACATGGCGGCCATCAGTAACGCCCACAGGC
AGCCTGCCCAGACCTGGCTCTCGTCCGCTGGGAGGCACCCCGACACCCGTAACCAACACT
TCACTGAAGACAACACAACAACCTTCGCGGAACTTCGGCTCCGGACACAACAACGTCGCG
AAACCTTTCGGTTACATGAACGGTAACGACAACGTCAAGAGCATCGTGAACAAACAATAC
AACACTCCAGTGAACATCTACAGCGACAAGACCATCGCGGAAACTCTCTCAGCACAAACT
GAAGTACTGGCCGGTGGAGTACTAGGAGTTAATTTCAAGAAGAACGAGAAGACATACGAT
GCTGAAAAGAGTGCAGTTTTCAAAGTACTCCAGGAAGAACAAAATGATCCTGAGCCAGAA
GTGTCGGCCCCGTCGGCCGGCTCAGTGCCCCCGGTGAGCGGGCTCCGACACGTGCAGGCG
CCCGTGACGCGGCCCGACGCACCCATCAACAACACCGGCGGCTTACCCCCCGGGCAGAAC
ATTTGCGAGGAGTGCGAACGATTAATTACGGGCGTGTTCGTGCGCATCAAGGACAAGAAC
CTCCACGTGGAGTGCTTCAAGTGCTCAACATGTGGATCGTCGCTGAAGAACCAGGGCTAC
TACAACATAAACGGCAAACTGTACTGCGACATCCACGCCAAGCTGGTCGCGCGTCAGAAC
CCGCCCGCACCTAACTTGGACCCCGTCACTGTGCCACCTGGTGGCCGAGTACCGAACAAC
ACATACTCCACGCCTCTGCCTCCACTTGCTACCAACAACTACACTAATGGATCATCTTCT
CTATTCAGTCCATCAAGCAATCTGTCTGGTCCGAAGCCGTTCGGTTCTTCGGTGGGCTCG
GCGTACTCCCCGTCCTTGTCGCCGCGCTCGGCGCCGCTATCCCCCGCACGGCCCGTCCCC
GCGCCCGCCCCGCAGTCCCCGGCGAGACCCGTGGCCGCGCCCGTCTCTGCGCCCGCACCG
CCATTCGCACCCGCACCCTTCGCTCCCACTACTGACGTGGCGCCAACAAGTAGTCCCCAA
AAACCGGAATTCAAAAGTCAAGCTGAAGAACGACTTATTAGAAAAATGCATAAAATGGCC
TTAAATGGATATGAAATAGGAATTCAACGTAAAATAAAGCCCGCTGAACATATTCAATCT
ATGGCTGATAAAATCCAAGATACCGTTGTCACCAAACATCCTCTCAATACAGATCTTCTA
CCTGAAGATATTATTCGTGAGAACAATACTCCGAGAAAAACATCAAAAAATGACAATTTG
TTCAAACATATCGAATTGGGAACCATGAATGATAAAAATAAAGACAATAATTTCCTTAAT
CCCATAGTTTATAATGGTAGCACTCCAGTACCACCACCATTGCCTACTTCGCCTATACCA
ACGTTTAATATTCACAGTACACCTCTTGGAGAATCAATAATTCACAATAACATAAAGCAA
TCGGACTTTCCCATTTATTCTAACGTCGACGATGATTTAGACTCCCAGTATGTAATTTTG
AAAGAACCTTTAAATGATACCGATCTCAAAATTACTGATGATCAGAAAGATACTATCAGT
ACTAAAAAACCCGTGAATCAATTTAAAAAGACAAATGGTTTACATACACCGTTGATAAAC
GGAATTAATTCAGTAAAACCAGAGAAAGAACTTGATAACAGCTTAGAGAATCACATCTAC
TCAAACACTTTGAAAAAAAGACAACTGTTTGAAAACAAAGAAGATACTAATGGACATAAA
TTTACACCAAATGAAATAAAAAATGACAAAAAAATCAATGACATATTTTCAAAAATTAAT
GCTGCACATTTCAAACAAGATATTTACGATGCACCTGCACCGGTGCAAGACAGAAAAGTA
ACAATACCCCCAATTTCTATCAAAGACAATACAACAGCAACTTCAAATACCCCTTCAACC
AAAACCTATGAAAACGATATAGATACCATTCCGGAAACGACCAATGAAGATAAATCTGTG
AACAATGATAAAGAAGAGGTTGTAAGGCGTAGGCAGAAAAAGAATATCAGGAGTGATGAC
GGTAGAAGAGATTCTCATATTATAGCGAGGCCACTAAGTACAATGACTTCCGTAGACGTG
GAGGAAGGAATGTACCCGGTTTGTCACATTTGTGACAAAGCTATAACGAGGTAAGGTATT
TCAAACTATTATGCACTGAAATATTTCAAGTAAGTTTCGACGATAAGCATGAGTGTAAAG
TGATCGAGAGCATGAGTTTTTATGTAAAAATAACTTAATAACCATAAACAATTACCTAAT
TTGTGAAATAAAAAGTTTTATACAGGTATTCTTAAGTTACTTTAACATCCTTATAGGGGA
CCATTCATCACGGCTC
(2896 bp)

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