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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR2947c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0042802 F identical protein binding
GO:0045843 P negative regulation of striated muscle tissue development
GO:0050733 F RS domain binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:5.37 TPM:5.26
ORF EntryO_TrvaFAMAMG1740_complete:A_TrvaFAMAMG_TR2947c0_g1_i3
Sequence
(Nucleotide)
AAGAGGGAAGAACCAGCCTCTCTTATCCTCCAGCAGTTGTTTCAAGGGTGGAGTTGTATC
AAAGCAATTTTAATGCAACATTACTTGCTGAAATTACGGGGAAATTTTTATTCTAAACGT
TGGCTACTCATCCTAACGCCATTTTGATTTCGTCAAAATATGGAAATCGGTTCACGTAGC
TACTACGGTTTTCTTGGTTGGCTTTAGATATTCTTTAAGAAAACACTGAACTTTCGACGA
GAATTCCGAAGAGATATAAAACTTCCAGGAGTAAAGATACGGATTAAGCCACATAATGTC
GGCACACGAGCAAATGAGAGCTATGCTGGACCAACTCATGGGCACAGCTCGAAATGGTGA
AAGTGACAGACATGGAGTAAAATTTTATGATGACTCGGTTTGCAAATCATTTTTGTTGCA
ATGTTGTCCACATGAAATACTTTCGTCCACTAAAATGCCCAACACTAGTCTTTATCTCAT
CACAATACTTAACAGATGAGGGATAGATTGTATGAGTTAGGCTGTTCTGTAAGTACCCAG
ATGTACGTATAAAACATTTATAGTTAGCTGAATGTAATCTTTCTGCTAAGCAGGATTTTT
ATTAAATATGGTCCTTGTCATATTAAATTGTTTACTAATGCTGCATTGGTGAGTACATAT
AAAATTTTAGGAACAACAAAATACTTAGCCTGGTGTGAAATATTTGGTGACATACAATAT
CTACGTTGGGTATGTACTCTGCTGTTTAAAAGTGTAGGGGTACAAAACTATTTGCATGTG
TAAAACAATCAATACATTTTAAACATATTATCATTAAAATAAACAAAACAATTTCAAAAT
GTTAAAATAGAAAATAAAAATTTTATAAAATGATTTTGTCCAAATATGTAAAGTGACAAT
CATAACTATTTTGAATACTATTATAGATTTACACTTTCAGTTCTTTATGAATTATAGTGC
TTGATTGTCACATCCATTTTGTTTTATGGCTTCAATTCACTCTTCATATCAAATAGTTAT
TGTAAGATATTCAGGCAGGTGTTTCCGCTGTTTTGTAAGTATTTGAAAAATTATTATCGA
ACGAGGAAGTAACCAGCTCAGTGTGCATTTGTTGGTGTTATTGTATGTATTTTATATTCT
ACTTTTACTTTGAAAATATTATATAAGTGTTTATAAAATATGCTCTTATATGTACTATCC
TACTCTGATTAATAAGGGGTCTTCTGAATTATGGAGGCAAAATCTCATGGGACTACACAT
GCCAGACCCAGATTTATTAATGGAAGTGAACAGTTACTTTTCATGTGCTTTTAATTCTTT
CTTTTGCAGCGTATGGATTTAGGTGAGTGTCCCAAAATACATGATCTGGCACTACGGGCG
GACTATGAGATTGCTACCAAGACCAAAGATTATTTCTATGATATTGATGCTACAGAACAC
TTACAGGCATTTATAGCAGATTGTGATCGTCGCACTACAGCTGCTAAACAACGCTTAGCT
GAAACTCAAGAGGAACTATCTGCTGAAGTAACTGAAAAAGCAAATGCTGTTCATGAATTG
GCTGAGCAAATAGGACAGAAACTGGCCAGAGCTGAAGCGCTCGGTGAGGAAGGAATGGTG
GAAGAAAGTGTGAAATTAATGGGAGAGATTGACGAGCTTCGTAAGAAGAAGGCTATAGCT
GAGCAAGATTATCGTAATTCCATGCCTGCTTCATCATATCAACAACAAAAGTTACGTGTC
TGTGAAGTCTGTTCAGCTTACCTTGGTATTCATGATAACGACAGACGGTTGGCTGACCAC
TTTGGAGGAAAACTGCATCTCGGTTTTATAACCATTCGTGAAAAATTGTCTGAGTTAAAG
AAAACCGTAGACAGGAGACGTGAAGAGCGCGGCGCTTCGGAACGGGAGCGCGGAGGAAGC
CGGCGACACTACGTCGGAGGCAGGGAGCTCGACCGACGCGCTCGGAGACATCGCGAGACC
GCGCGAGACAGGGACGGCAGACACAAGGATGATCGCGAACGAGGCGATAAGGATCGGGAA
CGGGGAGACAAGGAACGCGATAGAGGAGATAAGGAACGCGACAGGGGAGATAAGGAACGT
GAGCGTGGTGACAAGGATCGTGATCGGGAACGTGAACGAGAGAAGAAGCGTAGTCGATCA
CGCAGTCGAAGTAAACACGATAATTCCCGGGAGAGATCACGCGGTCACGACGGGCGCGAG
GCTCGCGAGTCGCGTCGCAGTCGCTCGCATCGCTCCTCGTCGCGGGACCATCGCCGCGAA
TAAACCTTACATATCTTATAACTCGTCGCTAACAATTCTGAAGGTATCTAAGAAAGTCTG
TTTTTTAAGTTGCAAAACGGTGTGCGTGTCAGAATACGCAAGTTGTGACGTCATAATACG
TACGATTCTCACATCTTAAACTTAAATTATCTTTTATTACTGTTTTATGAATTGTATTAC
AAATGATGAAATGGACTGAATATATTATACAATGTTTTTTGTTAGTATAAATAAAACCTT
AACAAGTTATTGTAACAATTAGTTTTATTAAATTAAATATATCACAATACCAAAATAAAG
TGCCTTCGGAATTGATCCTGTCGAGTGATTGACAAAAAAATTGTGATGAATATTTCAATA
ACATTTACGAAAATGTATTGTTAAGCATGTTGTTGTCTCGGCGGTTAAATAAAACAAAGC
GTTAGTAATGGGTGAATATTAGGTGCGATTTGTAAAGATAGTTTAGATTAGATACTTTGC
GTTTTTAGTTCCATCAATAAGTCAATATTCAGTTTAGTTAATAGGATTTTTAACTTCAAA
TTAATTATAAGCTTCATGTTACATTTTCATGTAATATTGTTTAGACCCTTTAATTAATAA
ATTTCTCTTTAGAATTGGTAAGAATAATTTTCTTTGAGTTGTGTAAAAGAACTAGTAAAG
TGTGTGTGTATTTGGGGAGGAAACTGTTTTTATTTGTTGCAATAAAGTAGTAATAAGAAA
AAAAAAAAAAAAAAAAAAAAAGGAAAAA
(3028 bp)

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