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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR2947c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		putative_splicing_factor_pTSR1_[Danaus_plexippus]
Ontology
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005685 C U1 snRNP
GO:0006376 P mRNA splice site selection
GO:0016607 C nuclear speck
GO:0019899 F enzyme binding
GO:0044822 F RNA binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:20.63 TPM:20.21
ORF EntryO_TrvaFAMAMG1736_complete:A_TrvaFAMAMG_TR2947c0_g1_i1
Sequence
(Nucleotide)
AAGAGGGAAGAACCAGCCTCTCTTATCCTCCAGCAGTTGTTTCAAGGGTGGAGTTGTATC
AAAGCAATTTTAATGCAACATTACTTGCTGAAATTACGGGGAAATTTTTATTCTAAACGT
TGGCTACTCATCCTAACGCCATTTTGATTTCGTCAAAATATGGAAATCGGTTCACGTAGC
TACTACGGTTTTCTTGGTTGGCTTTAGATATTCTTTAAGAAAACACTGAACTTTCGACGA
GAATTCCGAAGAGATATAAAACTTCCAGGAGTAAAGATACGGATTAAGCCACATAATGTC
GGCACACGAGCAAATGAGAGCTATGCTGGACCAACTCATGGGCACAGCTCGAAATGGTGA
AAGTGACAGACATGGAGTAAAATTTTATGATGACTCGGTTTGCAAATCATTTTTGTTGCA
ATGTTGTCCACATGAAATACTTTCGTCCACTCGTATGGATTTAGGTGAGTGTCCCAAAAT
ACATGATCTGGCACTACGGGCGGACTATGAGATTGCTACCAAGACCAAAGATTATTTCTA
TGATATTGATGCTACAGAACACTTACAGGCATTTATAGCAGATTGTGATCGTCGCACTAC
AGCTGCTAAACAACGCTTAGCTGAAACTCAAGAGGAACTATCTGCTGAAGTAACTGAAAA
AGCAAATGCTGTTCATGAATTGGCTGAGCAAATAGGACAGAAACTGGCCAGAGCTGAAGC
GCTCGGTGAGGAAGGAATGGTGGAAGAAAGTGTGAAATTAATGGGAGAGATTGACGAGCT
TCGTAAGAAGAAGGCTATAGCTGAGCAAGATTATCGTAATTCCATGCCTGCTTCATCATA
TCAACAACAAAAGTTACGTGTCTGTGAAGTCTGTTCAGCTTACCTTGGTATTCATGATAA
CGACAGACGGTTGGCTGACCACTTTGGAGGAAAACTGCATCTCGGTTTTATAACCATTCG
TGAAAAATTGTCTGAGTTAAAGAAAACCGTAGACAGGAGACGTGAAGAGCGCGGCGCTTC
GGAACGGGAGCGCGGAGGAAGCCGGCGACACTACGTCGGAGGCAGGGAGCTCGACCGACG
CGCTCGGAGACATCGCGAGACCGCGCGAGACAGGGACGGCAGACACAAGGATGATCGCGA
ACGAGGCGATAAGGATCGGGAACGGGGAGACAAGGAACGCGATAGAGGAGATAAGGAACG
CGACAGGGGAGATAAGGAACGTGAGCGTGGTGACAAGGATCGTGATCGGGAACGTGAACG
AGAGAAGAAGCGTAGTCGATCACGCAGTCGAAGTAAACACGATAATTCCCGGGAGAGATC
ACGCGGTCACGACGGGCGCGAGGCTCGCGAGTCGCGTCGCAGTCGCTCGCATCGCTCCTC
GTCGCGGGACCATCGCCGCGAATAAACCTTACATATCTTATAACTCGTCGCTAACAATTC
TGAAGGTATCTAAGAAAGTCTGTTTTTTAAGTTGCAAAACGGTGTGCGTGTCAGAATACG
CAAGTTGTGACGTCATAATACGTACGATTCTCACATCTTAAACTTAAATTATCTTTTATT
ACTGTTTTATGAATTGTATTACAAATGATGAAATGGACTGAATATATTATACAATGTTTT
TTGTTAGTATAAATAAAACCTTAACAAGTTATTGTAACAATTAGTTTTATTAAATTAAAT
ATATCACAATACCAAAATAAAGTGCCTTCGGAATTGATCCTGTCGAGTGATTGACAAAAA
AATTGTGATGAATATTTCAATAACATTTACGAAAATGTATTGTTAAGCATGTTGTTGTCT
CGGCGGTTAAATAAAACAAAGCGTTAGTAATGGGTGAATATTAGGTGCGATTTGTAAAGA
TAGTTTAGATTAGATACTTTGCGTTTTTAGTTCCATCAATAAGTCAATATTCAGTTTAGT
TAATAGGATTTTTAACTTCAAATTAATTATAAGCTTCATGTTACATTTTCATGTAATATT
GTTTAGACCCTTTAATTAATAAATTTCTCTTTAGAATTGGTAAGAATAATTTTCTTTGAG
TTGTGTAAAAGAACTAGTAAAGTGTGTGTGTATTTGGGGAGGAAACTGTTTTTATTTGTT
GCAATAAAGTAGTAATAAGAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAA
(2150 bp)

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