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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR2888c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_SWI/SNF-related_matrix-associated_actin-dependent_regulator_of_chromatin_subfamily_A_containing_DEAD/H_box_1_homolog_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
GO:0045089 P positive regulation of innate immune response
GO:0050829 P defense response to Gram-negative bacterium
Transcript
Level		FPKM:0.27 TPM:0.26
ORF EntryO_TrvaFAMAMG1711_complete:A_TrvaFAMAMG_TR2888c0_g2_i1
Sequence
(Nucleotide)
ATTTTTTTTTCCGTCTAACCCCATTTCGATAACGCGCGATAAGGAACTTCGTTCCAATTA
TTTTGGAAACTGGTCATAAAAGACCTGAGGCTGCCAAAACTAAACTTTAGATTCTATAAA
AATAGCCAAAAAAAAAACATTTTACCATTGATTATAACTTTGTTCTGAGCAATAAACAGC
AGTACTGTAATTTATACACTCCATTCCACAAAATAAACTATTTTACACAGATCTTAAGCA
CTTTGTTTATAAATATAATCTTGTCTCGTTATGTTAGAGTATGAATCACATTTGTTTGGA
AGAGGTCCATCACTTGTTGGGTGACGTCAATCCCAGAGCTGCTGATAATAATCGTACCAC
GTTTTTCTGTTCTGTTGCCTCGTTTTCATCTTCTCCGGTGACATGTTTCTCCAGGTTGAG
TTTCTCCTGCGCGACCTGATATATTCCCTCCTCGATGGTGCCGGCGCTCAGCAGCCGGTA
GATGGTGACGGGGCGCGTCTGACCCAGTCGGTGACATCTGTCTTCAGCCTGTTTATCATT
ATAAGGGTTGAAGTCTATATCATGTATGATGACAGTGTCTGCTGCAGTGAGATTGATGCC
GAGTCCACCGGCTTTTGTTGACAGAAGGAACACGAATATATCCTCTGTATTGTATTGGTC
TATTAGCTCTTGTCTCTCCGTAACGGCAGTGCTTCCATCCAAGCGTAGATACTGATACCT
CCTGATGGTGAGGTAGGGTTCGATAATGTCCAGCATCATGGTGAACTGACTGAATATGAG
CACCCGGTGACCCTCAGCCTTCAGTCTGGGTAGCATCTCGTCGAGCTTTTGGAATTTACC
GGAGTCTAATATTAATGATTCCGGTATCGTGTGCTGTTTGCAATACTGCTGCGCGAGCTG
GTGTATTTGGAAGTCTGATAGACAGAGCAGGTCCTGGAAGGCGTAGTGCTCGTTCTTCTC
CTTGTATGAGGGTTGCTGCACGAGGCGCGCGGCGATCTTCTTGAGCTGCGGCCCCTGGTA
GTGGTAGCGGAGGAGGAGGGGGTGGTTGGCCAGTTTGCGCATGTCCATCATCATCGCCAT
GCCGCTTTGTTCTGTTGTTGCGTAGATCGCTCCATTCTTATCGGAGAACCCCGAGATCAG
TTCCTTGTACAATCGTTCCTGTTTTTCAGACATAGGACATAGTTCCGTATGATTAGTTTT
GTTCGGCAAGTCTTGTAACACATCTCGCTTCAGCCTCCGGAGTACAAACGGCTTCATGAT
GCGTTTGGCTTGAATTATTTGACTCTGTTCGAAGGCTGGTTCATCATCTTCTTTGCTGTC
ACTCGATTTCTTTGTTTTTGATTTGGTATTCTTTTGGAACAAGCTCTTCAGGTCATTAGT
CTTCCCGAGGAATATGTGAGGCATCACGAAGCACAACAACGACATCAGTTCAATCAAATT
GTTCTGTAGCGGAGTCCCCGTTAGTAGCAGACGGTGCTTCGACTTAATTTTAAGTAGATT
ATCGTATCGTTGTGTGGACATATTCTTGAGCATGTGAGCTTCATCATACACTACATAGTG
CATCGGAGTTATTCGGAACATCTTCCTCTCTTCAGGGCAACTGCTCACCATTGTATACGT
AGTAAGAACGACGTCATAGTTGCTGAGTCCCCGCGCGTACTCTATCCGCAGCTGTCGCCG
CTCGTCGGGGTGCCCGTAGTACTTGCTCACTCTCAGAGACGGACACCAGCGAGATAGCTC
GCTGCTCCAGTTATCTAAAGTAGAAGCCGGTACCACAATCAGATGCGTCCCTTTAGCTTG
CCCAGTCTCCTTCAGATGTGCCAGGAACGCTATGACCTGCACCGTCTTCCCGAGCCCCAT
CTCGTCAGCCAGGATCCCGGATACTCCCTGCTTGTGCAGTACCGCTAGCCAGTTCAGACC
CACAAGCTGATATGGGGCTAGCTTTAAACTAGGATCTAATATAGAAGGTTGTTTAAGTCT
GCCGGCGCCCGCCGCGACGGCCGCTTCTAATTGTTGAGCCAAACCGACACACTTCTTCAT
CAACCGTTGTATGTTATTCCTGGTTGTTAGTAGCTCTTGAGTTGAGTTCAAAAGATCCGT
GCTTAGCATTTTGTTGCTGTTGAATTTTTCTACCATGTCCAGCCATCCTTTAAAAGGTCG
CAATGATATAATAGCTTCAGCTTTCTTCTGTGAACAACCGCTCAACATTGATAACTCAGT
CATATTGCTTGTGTTTAGGAACTCAAATACTTTCTTCTTGTCACCGATTAGATCATCTGT
CACTTCATTGTCAGAATCATCACTGTCATAAACACAATCATCTTTTCCTTTTTTAACACC
GTAATCATCATCTTCACTGCCACTACTGCCTCTTCTCACTCGTCCACCCTTAGATTCTAT
CGGTTTCCTAACAACGAGTATTCTGTTAGGACCGCTCGTCACTCTCATGTTCATGTTACC
GTTGGGCCGAGATTGTGACGGAGCACTGAAGTAGGACGTGGATCCTTTGTCATTACTCTC
TGGGTCATGTTTGAGGAGTTCGTCCCTTGAACGCTCTTCGTTCCAGCCGTGCTTGACTAA
AGTGTTCTTTACAAACAGAGGTGAAATATCTGGGAACATTTCTAGCATGTTTCTAAAACG
TCTCTCCCTGACTGCAGGTGTTAGTTCAACTTGGACGGCCGGTTTCTTGTTTGGTGGTGA
TGCTTCATCGGAATCAGAATCCTGGACCCTGATCCTCTTGTACACAATCACTGGATTGGT
TTGAAGATGAGTAACATTAGTTGGGGCTTGCATCCTGATTATTTGTTGTTGAGGATTCGA
CGTTGATGCCTTGATCGTAACCTGGCTGTCAGAACCTGAGGGTTCGTTTGGTTTCCTTTG
GAACCTGTACTGTCTTAGATAACTCAACACACTAGGACTGTTACGTTCAGACATTTTACA
CGATGCATGCAGAATGTATGATACTATCCTTTATTTTAATTCAAAAGTTCTTTAATAAAA
ACCAACGAAAAAATTTACTGTTATCTATCATACCACTACAACACGGCAAGGAAACAACAT
TTCAG
(3065 bp)

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