SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23515c3_g3_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_regulating_synaptic_membrane_exocytosis_protein_2_isoform_X5_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000123 C histone acetyltransferase complex
GO:0001205 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003682 F chromatin binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007049 P cell cycle
GO:0010628 P positive regulation of gene expression
GO:0016020 C membrane
GO:0016568 P chromatin organization
GO:0019046 P release from viral latency
GO:0030424 C axon
GO:0030425 C dendrite
GO:0042802 F identical protein binding
GO:0043025 C neuronal cell body
GO:0043254 P regulation of protein-containing complex assembly
GO:0043981 P histone H4-K5 acetylation
GO:0043982 P histone H4-K8 acetylation
GO:0043984 P histone H4-K16 acetylation
GO:0043995 F histone acetyltransferase activity (H4-K5 specific)
GO:0043996 F histone acetyltransferase activity (H4-K8 specific)
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046972 F histone acetyltransferase activity (H4-K16 specific)
GO:0048188 C Set1C/COMPASS complex
GO:0050821 P protein stabilization
GO:0070461 C SAGA-type complex
GO:0070688 C obsolete MLL5-L complex
GO:0071339 C MLL1 complex
GO:0071407 P cellular response to organic cyclic compound
Transcript
Level		FPKM:8.93 TPM:8.75
ORF EntryO_TrvaFAMAMG28744_complete:A_TrvaFAMAMG_TR23515c3_g3_i1
Sequence
(Nucleotide)
CATGCTGATTACTGCCTTCACTTTTAATAATATAATGAGTAGAAGTCAGTGGCAAACGAC
GCTCCATTGGCCCGGCAGTCATTATTAAATAAACCATCGGCGGGGTGGCGCGGTACGGTT
GTCGTAGCGGGCTCAAGACCGCAGCACGCGGCGGGCCCGCGCACCGCTCGCGGCCTGCCG
CCGCACGCCATGGCCGACATGCCGGACCTCTCGCACCTCACGCCCGAGGAGCGCGCCATC
ATCGAGGGAGTCATAATGCGACAACGCCAAGAGGAGCAGCGCGAACATGAAATTATGAGG
CGAAAACAAGATGAAGTTGCCGTGCTGGAGCAAACCATTCGTACCAGAAATGAAATGCAA
CGAGCTGCAGGTGTAGAGCTCGTAGCAACCTGCCACCTGTGTCTGAAGACAAAGTTCGCG
GATGGCGTCGGCCATTCCTGCCACTACTGCAGAGTTAGATGCTGTGCTCGATGTGGTGGC
AAAGTTACTCTACGATCCAATAAGGTTATTTGGGTTTGCATTCTGTGCCGAAAAAAACAA
GAACTTTTATCAAAAACCGGCCAGTGGATACATAAGAGTGCTGGTCCCGATTCTATGTTG
TGGCCAGCCGAAGCCGAACTTCATGGATTGATGCCCCAAGAAGACGCCTGTCACGACAAA
CGTCCCAAATTAGAAAGAGCACACAGTGCAGCGGAAAAAGAGAATCAGCCGTTACAAAGA
TCTGGTAGTGCTCTACGGCGTCAATATAGTCAACAAGATCAAAGGTGCTACGGAGAGCTG
GAAGGGCTGGCAAGAACTCACCCACATCTGGTTCACTCTAGGCAGAAAGCTGCATACGGT
GTAGTTGAGCCATTGATCTCGGCGCCTCTACCAGCACAACTCTTGCCTCACGGCTCCGCT
GGCCACATGCCCTTACCGCCTCGTTCCTCATCCTCGGACGACGAAGTACCAGAGTGTATA
TCCGATGAAAACGACGAGTATCGTGAGCGTGGGCAACTAGAGGCCTCTGCTTCTCAACGG
CACCCGCATCTGCGTAGTGCCAACGTAGCTGCCATCAATTATTACAATTTGACTAATCAC
TCATCAGCTGGTTACGAAAATGAAAGTCACGGACAGTTCGAGGATAGAACTGTGCCAGCC
GGTGGACGCAGTTTCGATTCCGTGACCGATTGTCGATGGCGAGCTCGTGATGACAGTGAA
GGTGCATATTTACGGCCGTATGTGCCAGACGAGGGCCCGCGCCCCGAACGCGCCGTCTAT
AAGAGTGCGTATCTATGGGAAGATTCCTCCGACAATAGACGTTTTACTGAGAGGAGAAAA
AAAACGGTCCGATTCGATGGCCATGAGGGCGCGGCCACATTTCCTAGAGGAAGCCGCGAT
GCGTCAGGCGCTCCGAACGATTGGGCTTCCCTTCGCTGGGAGTCAGAGCGGCAGACAAGC
CAAGATTCCGCAACAAAAGATTCAGGCATCGATACCTCTAGCACATTCACATCCAGTGAA
GATTCAAACAGAGGCGATTGCCCTAAGTTTCCACCAAGTTGGCAAGCGGCAGCTGACGGG
TCACGCGTCATTGGTCACATGGTACTGCGCAAAAGTGTTGTGGAGGGTAGTTCACATTCA
TCTGCAGCCATATTGGGTTTGAAAGTTGTGGGCGGAAAATTACTACCCGACGGTACAAGA
GGCGCCATTGTAGAAAAAGTTAAAAAAGGTTCAATAGCAGATTTAGAAGGACAGTTGAGG
ATTGGTGATGAAGTGTTACAATGGAACGGTGTACCTCTTCAGGGTCGTTCAGCCGATGAT
GTAGCCTCAATTGTTGCGGATAGTAAGCACGACTCTCATGTTGAATTAGTAGTGTCTCGC
CCTCTGCCTACAGCTCGACCTGGAGCTCAACCGTGGAGAAGTCACAAAGAAGTGTACACG
GAGACTATGATGGTGGGCGGTTGTGAGAAACCTAGCGTTCTTGTGACTTCTCCAGGATCA
CCAGACGTTCACTCCCGTCGTCGACCGGCGCGGCACAACCATCACAATGCCAACGTCACC
GGAGTTATACAGCTCAAAATTTATTTCGACATAAGCGCTCTACAGCTCCTGGTCACAGTT
GTCTCAGCGAATGGATTGAATCCACGAGCTGACGGCTCTCCTAGATGTCCTTATGCAAAA
ATATTTTTACTTCCTGATAAAAGCGAAAAAAGTAAGCGCCGAACTAAAACACTGGCCAAC
ACCTTAGAACCAAGATGGAACCAAACATTCGTTTACTGTGGTATAAGAATGACCGACATC
AAAAAACGAACTTTAGAGGTGACTGTCTGGGATTTAAATCGTTACGGGCCAAACGATTTC
CTGGGTGAAGTTTTAATAGATCTAGACAACATAGGACTGAACAACGAAGCAAATTGGTAC
ACATTAAAAGCGCACGAAGACTCGGGTCATTTCTATCGGAACCGAGAGGAAGAGGCTGAC
GGTGACCACCTGTCTCCGCCGTCAACATCGACGTCCCGACTGTCAGACTCCGACACCCCG
AGTGAATGCGACCTGAGACGACATCATTCTCTTTCGAGTCTTGCATCCAGTTCCAGTCCA
CCGCCTCCTCATGATAGAATGGACGTGGAAGGTGCAAGAAACAGCCGACGTGATATGTCT
CCTGCGGGTCGAGTAAGAACCGCTGGGATGTCCAGAGATTCCAGAGATCGGAGCGTGGGG
TACTGCGTGGCTCGGTCTCAGTCCGCGGCAGGCGTGGCTCGTCCTCAGCGCGCGCGCAGC
AAGTCTCCGCGCCGCTCGCTGTCGCCGCCCACGGACCGCGACGGCTGGCGCTACGCAGTG
AACGACGAGCGAGGCGAGGGGTCGCGGCTGCCGACGCACGCGTACGCTCCTCGGTTCCAG
TCGCGCTCTGCCACCGCCACACCCACCACCAGCCCCAAGAAACGACAACTACCTCAGATT
CCACACCAGAGTCAGAGTGCCCAACGAGCGGTCCGAGCGCAGGTGTCAGCAGACCTAGAG
GAACGATGGGAGAGACATTATGCGGGATTATCGGATTCGGAACTAGCGGCCCGCGGCGGC
GGCGTTAGTTGGGCTCCGCGGAGAAGACTATCCCCTGATGCGACTGCTGCTGATTCAGAC
TTAGAATCAGTCGCTTCTGTGACCTCAAGCGCCTTCAGTACACAATCAGAACGTCCTCGA
CCAACGAGGATGCTTAGTAATGACTACGGCGGAAGAGATAATGGAAGAAATAATAATCAA
CAACAAACATTAGAGAGACGAGAATCACGAAGAAACCAGTTCACTCGAAGTTTGAGCAAC
GCTGACGTACCTCCAGACGAAAAAGCAGATGGCAGTCTGAGCGATACAGCATTAGGGGGT
ACTGGCGAGTTGGAACCCAGCGTCGATGATGTTTTATTGAAAGCCGAACCCAGAGATTAC
TTCGGACCTGGAATGGGAAAGAAAAGTAACTCTACCTCGCAACTATCAGCCACAGGACGA
AAACGAAGGTTAGGTTTCGGTAAACGTGGGAAAAACTCGTTTACTGTGCAACGAAGTGAG
GAAGTTGTTCCTGGCGAGATGAGAGGAGGCTCCGGCGTGTCGCGGGCCTCCTCCGCCTCC
AGTGAGAACGACGAGGACAGATGGTCACCGGGCATGCGAGGGTCCAGTTCATCTGAAGGC
GGCGGTATATTGGACTTCGTGGACGGCCTGGGCCCGGGACAACTGGTCGGGAGACAGTTC
CTGGGCTCCACGTCGCTAGGAGACGTCCAACTGTCCTTGTGCTACCAGAAAGGATTCCTT
GAGGTAGAAGTAATAAGAGCGCGAGGGTTACAGGCGAGGCACGGAAGTCGAACCCTTCCT
GCGCCCTATGTGAAGGTGTACCTCGTGAACGGGAAGCGATGTATCGCGAAGGCTAAGACG
AGCACTGCGCGGAGAACTCTCGATCCTCTTTATCAACAGACTCTTACATTTAGAGAAAAC
TTCAAAGGATGCGTATTACAGGTAACAGTGTGGGGTGACTACGGTCGCATCGAGGGAAAG
AAAGTATTTATGGGCGTGGCCCAAATAATGTTAGACGACATTAACCTATCCAATATCGTA
ATTGGATGGTACAAATTATATGGAACTACTTCTCTAGTCGGTAATGTCAAAGAAAGTTAC
TTTCTCCAAAACGTAATAAGAAACGCGGATGATTCCCAACAAATAAAACAATAACAGTTT
TTCTGTAACGAAACCGAATTTTGTTCATCGGCTGGAGCATAATTCGGAGAAATTACGGAA
AAACAAAGAATCGTCCGAAATAATTTAGTGGTACTGCTTTAATCATAATAAAATAATATG
CATAATATTATATATCGAATAATATAGGAATTTTCTATAAGCGAAAGGTAATTTAATTGA
TTTGTATTATTTCTAATGCCTACCGAAGTTTTGAATAGATAGCATTTTATAGCAATGAAA
CAAGTGTATAGTGTACTCGATAACATGTAATTAATAATTAAAAGCCAAATTACATTTTAT
TGCATTTTCTTTTCAACGAACCCTGAATAGTTACCACATTGTAACACCATAGTGATTTAT
AAAATGATTATATTCTTTTATATTTCGTATATGTCATGATTATAGCAACACTTGTTTTTG
TAAAACGTGACGTACAATGTGGTAATTTATTGCATATGAATACAATTTGATTCTATCGAC
TTACTTAGAACATAAAGAACGTACTTGACACTTAAAACGGATATGTAAAATCTATTTCAT
TTCATAATCCTTCTAATTCAATCGTCCATCATTTTAAACCATCTACAAGTTTAGGCACTT
AAAATTACGTTACAAAACGTACGAAAATAATGATGGAATTTTATTTCCACTTATAAAATG
TCTTTAAATGAGATTTCATTAATTGAATCGATGCAGACAGTCGGCAGATAAACACTTATG
TTTCAAACACACTATAAGTCTTGAATATAATTATAATAGTTAATGTACTACTTGTTTGGG
TTGTTTGGAAGGAGACGCGCCGGGCAGCCGGCCCTCGCCCGCTCGCTTCACGCCGGTCGA
TTTGATATCTTGCAGCCACCTGACCTGCGTGGCGGGTCCGTATCCCTTCTCGTTGCGCGC
GGCGATGCGGAAGATGATGGCGGGCTTGGTGGAGGAGTCCACGTGCGCGGCGCTCAGCGA
CGACTGCGGCACCACGCACGTGTTCGCCTTGCCGCAGTACACGCGCACGAACGCCAGCTG
AGACTTGGCCGCTTCCTTTGGTTGACTGTTAGAACGCACTGCCAGATAGACAGAATACTC
GAATATTCCTTCGGCGGCAACTTGCGGCGGCTCCCACGATAAATGGGCTCCTTCTACAGA
CTTCGATATTTTGATAGCTGATGGTGCACCCGGAAACCCAGGAAGGCAAGTTTTGAAAGC
AGATTCTTCACTGAACTCTCCCTTGCCACACGAGTTGATGGCAGCTATTCTGAATTTGTA
AGCCGTGCCGTGCTCGAGGGGCGTGGTCGGTAGTCCCGTCAACTCAGGTAATGCGTCCAA
TGATAAATTAGACAAGTCTATGTTTGGATCCGATATGTAATTTTGTACCGTAAAAGATGT
CCCTTTAACAATGCCAACTGTATACCACGCATCTTCATCTACTTTCTTAGCATCTTCTGG
TTCAGCCTGTTCATGATGATGTAGTGCTGCACTGGCGAGTGTGGCGAGCGCGTGCGCCGC
GATGGTGGAGGGCAGGGTGCTGCTGACGGCGCCCTCCGCCTCGCCGCCCGCGACCCCTCC
TACTGACGATGACACCGACGTCGCACCGCCCTCCTCGCCTTGTGTAAGCGTCGGTGTAGA
AGTAGGCGATAATAGAGCGGCAGATCCGTTGGCCGTCATAGTCAACAGCGGCATTGAGGA
CTCGGTGGCGGCCGCCGCGGCATCTCCCCCGCTTTCCATCTCCGACGTGTCCGCGTCGAA
TTCGTTCGCAGTGTGCTGCTGGGGCGTAATCGAAAACGAATGCCCTAGGTTCGGACCGTT
GGCTGTGGACGATATTAAAGACTGATCCAACTGGCCGCTACTCGAAATATCTGCTCCAGC
CTCTGCTGTACTCGAGCTTATTCCTGTGCTGAGGGCCTCTTGTGCCGCACTGCTAATGTC
ATTGACATCATCACTGCTTGCCACCCCTCCCTCAGCTAAATCATCATCCATGGTGCTTGA
TTCATCATCTTGAACATTGGATGTCCCTTCAACAATGCCCACACCACTGTCTGTTGGCAA
AACAGCTGAACTAATTGATTGATCAGGAGATTCCTCAGCCTCACCTAGACCTTCTCCTTC
TTTTATCATGGAATCCAATTGGCTATCATGATCATCTTGGGGTGAATTCTCTTCAGTCTC
TGCAGGTGTAGATAGACAGTTGTCTCCTATGTATGCTGATTCATCATTTACAACTCCTGG
TGCAGTCTCATCAATGTCCATTTCATCTTCAATATCTGCATGACCTTGCTCAAGTACAGG
CAGTTCTTCCTCAACAGGAGGTGCATTAGAAGGCTCTACATCCAAAGCATCGCTGCTGCT
AGTAGGAGCACCATTTGCAGCGGTGTCTTCAGGCTCAGTAATCACATCATCACTTGCTGA
ATTATTATCAGGTAATTCTTCAATAGCATCAGCAACCTGGTGTTCGGCTAGAGGCGACAC
TTCCGCGCCATCGTGTAAATCACTATGAATGGCAGAGTCTGATTCCATTTTTATTTTATA
ACCACTTCTTTACTAATAGAACTCACAAATTTATTGAATTTTAAACAAGAAATAAACTGA
AACATTAAGCATTTTCAGAAATATTGTGAAAAACGTAGAAATTTTGACACTTCGTCAAGT
TTGGAAAAGCTTTTACGATTGGTC
(6864 bp)

- SilkBase 1999-2023 -