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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23510c0_g3_i2
Scaffold_id
NCBI non-redundant
(nr)		putative_Lysosomal_trafficking_regulator_[Danaus_plexippus]
Ontology
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006810 P transport
GO:0007040 P lysosome organization
GO:0015031 P protein transport
GO:0015630 C microtubule cytoskeleton
GO:0032510 P endosome to lysosome transport via multivesicular body sorting pathway
GO:0042267 P natural killer cell mediated cytotoxicity
GO:0043473 P pigmentation
Transcript
Level		FPKM:5.34 TPM:5.23
ORF EntryO_TrvaFAMAMG28677_5prime_partial:A_TrvaFAMAMG_TR23510c0_g3_i2
Sequence
(Nucleotide)
TTTTTATTTAATAAAACATTGTTTATAATTTATTGTAAAAATATTGCGTTATTTCTAAAT
TACATAATATTATATTCATTGACAAAATATTTGTTAACAAACAGTAAACTCAACTTATAA
CATTAATATTTGAAGTATATCAGCCTCGTTTTACTTGTAATGTAAGTAACATTACACTAA
AAACTTAAAATCTACTGGTTATTTTTAAAAGATTGGTACGACTTTGTCGAAATTCACTTG
ATGAAATAAGGATTTCTAGTAGGGGTGTGCGAATATAGTTCGAATCGAATTGAATGGAAT
AATTCGTAAGTTCGAATTATTCGCACACCCCTAATTTCTAGTTAAAATAATTAATTTTAA
TTTTATAAAACAAATACTTTAATTTGAAAAGGAATGCCATTAAAGTTTTTATCGTTAGGT
TACATGAAAAACAGTCTTTTAGAAAAATATTACATTTTTTTTTATTTGATGCTTGTGATA
TTTTTATTTGATTATAAAATACGCAACAAATAATCCACTTAAGTTCTATTACTTAAAAAC
ATGTTTTTTTTAAATGACTGATTATGTAACAAATTTATTACTTTATCTCAGATTGCAATG
AGCTGCGCTTATTAAAGAATCATTTTTAAATTGATTTATACATTTTAAAGTAAGTTTAAA
CTCACAACTATGTAGTATTGCTTATTTTGTTCCAGAATATAAAAATATACGTTAATTATT
GATACAGAGTATTATATTATTTGGCATGCTTCTGGAAGACGAATTATTCAAAATCACTTT
AATATAGAAAAATATTTTTCTTGAGTAGTATAGTGCATATTATTTAGCTACCCAATTTGA
AGTTCACTTCTAATTTTAAAATTTAAATTAATCTCTAGTAAAATCCATAGATCTTCATTT
GTTATTGACAAAGATTACATACATTTAAAAGCGTTCAAATTCGGACGGTATAATTAGATA
TGTTTCAATAATATGTATGTGTGTATATGTTTGTGTACAGTGTGTTTTCTTGTGTATGGT
GTATGTGTGAGTGTTTGTATGTGTGTGTGTGTGTCATACGAGTGCAGTAGCTGCGTGTAT
GCGGACGGGCGCGGGCTTGCCGTGCGAGCTCTCCCAGGCGACCACCGCGCCGTCGCCGTA
ACAACCGAACAGGATGCTGCTGTCGCTGCTGTACGTCAGACTGACGAGCGGTAGTTGCGA
GTGGTGCGGCGGCAGCACACACACGGGCTGCAGGTCCCAGGAGGAGTAGAGGCGCACGCC
GCCGCCCCGCAGCCCCGCCGCGATGCTGTTGACGCTGACGCCCTCCGCCGCGCGCGAGTA
GCAGATGCTCGTCACCTGCTCCGACACCTTCACGCTGCCTACGAACCGTCCATTGCAGGT
GTGCACCCTGATGATAGACTTGTACTTGTGATGCGCGTCCGCTTCGTACGAGTCAGCGGC
GTGGTCGTGGTCGGGCACGTTGGCGGGCGGTGACGTCACGCGCTCGCCCCGCGCCGCCCC
CGCCCCCGCCTCGTGCACCGTGGCCACGTCGCACAGCGTCTCGCTCACCGTGGCCGCGCA
CACCGGCAACATGTCGCGGTTGGGCAGCGCACGGATGTATGTCAATGTGTGCAAGTCCCA
CAGCAGCACGGTGCCGTCGTCCGCAGCGGTGAGCAGCAGCGCGGGTCGCGGCGCGGCGTG
CAGGGCTCGCACGGCGCTGCGGTGTGCGTGCAGCGTGTGCACCGTGTCGCCGCGCACGCA
CACCACGCGGCCCGACGCGTGTCCCAGCACTAGCGAGCACGCGCCGCCCGCGCACTCCAC
GCTACTCGTCACTGTCGTTATTTGATCTAATGGATAAGATTGCAGTAAAGGTAAATGTGG
TTCGCGTCGTCTCTTAATCCGCACGATGTTGTCGGAGTGACCCCACGATGCCAACGCTAA
CCCTGTACCGCCAGATTCGTTGTTCAATGCGAAGAGCGCAGTGGTGGGCGTGGAGACGGC
GACGGAGCGTGGATGCGGCAGTGCCAGCAGCGTGCAGGCGGCGGGCAGCAGGCGGCGCGC
GAGGGGCGCGGGGGCGGGCAGCGCCGGCGACCCGCAGTACCGGCCCCAGCGTGCGCCGCG
CACACACGCGCTCACCGGGGCAGCGCCGCTCCCCCCGCCACTCGCCGCGCCGCTGAGCTC
GCGCGTGGCGTGCGGGTGCGGGTGTCGCAGCAGACGCCGCGGGACCTGCCCGTACGTGCG
GACCATGGCGCACGCCGCGCTGCGGTCCACCTCGTCCTCCAGCGCGTCCGGGTCGAAGCC
GTAGTATGTGCATGCCGGGAAGACGTTGACGGCGTCGAGCGCGGGCTGTCCGGTCTGCTT
GTAGCCGAACACGAGGTCGATCCAGTGCGGCAGGGTCTCGGTGACGTGCGCGGCCTCGAG
CGCCTGGCGGTGCAGCAGCACGAACAGCCGCGCGTCCGCCGCCCAGGGAGGCAGCTCCAC
GCTGTCGATGCCCTCGCCGCACTGACGGACGCCCAGGTTCAACCCTTCGTTATTATAAAA
CAGTTCTGGTAGATAGAACAGTTCGGGTATGAGTTCTTTGACGTCGGTGGGCGAGTCGTT
GGTGATGAGTCGCCACGTGGTCGCCAGCGAGTGGAACGTGCGGTCCGGCATGTCGAAGTT
GTTGTCTTGATAATTGAGGAATAGTTGCGTGAAGGGCGACAGGCGCACCAGGTAGTGCAG
CACGGCGCCCGAGTTGGAGTACAGCGACGCGTAGTGGTGCGGGGACCGGGACAGCTGCGA
GCCGCCTGACTCGCCGCGCGCTGACTTCAGGTTATTGTAAGTATTGATGTAATGCTGTTC
TCGTTTCTTGTTCTGCACGGCCATGGGTCGGGCGAGGTCGCGGAATGTGTTCGGGTCGTC
CAGGTCGAGGATCTTGCCGGTGTAGTCGGCCAGCACGAAGGGCAGCACGGGGTACTGCAT
GAGGTCGTTGTAGGAGCGGCCGCCGAGCCCGTTCAGTCGCATCAGGTACTCCCAGTTGGT
GATGCTGCCACTGCGCCACTGAGACATCGCGTCCGTCAACGAGTCAGCGTCCACCTTGCA
GGGGAGCGCGGCGGAGGCGGTGAGCACCTTGAGGAAGGCGCGGCGGTCGTCCTCGGCGTC
GAAGGCGAGCAGGTGCGCGTGGCCGTCGTCCAGGAACAGCTCGAGCGCGCGCTCCTGCAG
ACACCAGCGCCGCGTGGAGAGCGCGCGCACGCTCGCCAGCGGCCACGCCTGCGCCGCGCC
CGCCTCCGACACGAAGTGCGCGTGCGACGCCGACACCAGCAGCTCGCCCGGCGTCTCGCG
CGCCGCCGACACGTGCAGCGCGCGCCACGTGTGCACCACGCGCCCGCCGCCCAGCACGTG
CGCGCCGCGTCCGCCGCCCAGCACGCTCTCCAGCGGACCCGACACCGATGACAACTCACT
TTTATATTTAAACTGTGTCTTTAAGAATTTAGGCGGTATATTGAGATGTGCCCTCCTGAG
CCTCACTCTGACTCGACCCGGCCCTTCCTTGTCATCTAATTCCCACGACGTAGGGTAGCT
GCGAGGATCGTGCCATACACCTTGCTCGTGCGTGTGCGTGTGTATGAGCGTGCGCCAGGC
GTGGTGTGCGGCGGCGAGCTGGCAGTCAGCGCGGCGCAGGTGTTCCATGAACTGCTTTCG
CGCGTCGTTCTGCTGCTCCACGACGCCGCGCGTGATGCTCATCGCCGCCTCCTGCACCGA
CCGCGCCAGCGACTCCTTGCTGAACACCGCCTTGGCGACGGCGGGCTTGGTCCTGGCGGC
GGCCTTGCTCCAGCGCTCGTGGTCCTGCTGCAGCAGCGCGTGCGCCTCGAGTGACAGCGT
GTCGGCGTGCAGACGGTCCGCGAGCGGCGCCTGCATGGACAGCGCCCACTCGCGCGCCCA
GTCCGTCAGCGCCACCTCCACCGAGCCTTCGCCGTGCATGTGCTTCAGCATCACCAGGAT
GTAGATCGCTAGCTTCCGTGCGGTGTGCGGGTCGGCGGCGGGCGGCGGCGTGACGAGGTG
GTGCGGCGCGGGGTAGAGGTGTCGCAGCAGGGCGGGCTGCAGGGGGCGCGCGGCGGGGAG
GGGCGCGGCGGCCCAGCACACCAGCTCCTGCAGCGGCGCGCACCACTCGCCCACGCCCAC
GCCCCAGCGACCGCGCCGGCCGCTCTCGCTTACGGCCACGAGCAGCGTATCAAGCAGTCT
CTCAAAGAGCAGCTGTTCCTGCGGCGCGTGTTGTCGGTGCGCCTGGTGCAGCAGGAAGTT
GAGTGCGCGCTGCACGGTGCCGAGGTGCCGCGCCGCCAGCTCCGAGCGCGACGTGCTGTC
GCCCAGGGACACCGCTGACGTCAGAACATTAGCGAAGTAGTTGGCGTGTTTCTGCTGATG
ATGCTGGTTGAGAAGGTGCTGCAGTCGGTCGAGCTGTGTGAGGTACAGCGACACCTGCGC
GTCCCGCACCGCCCGCCGCGCGCCCCACTCCGCACCCCCCTCACCCGCCTCAACCCCCGC
CTCAACCCCCGCCTCGCCCTCCATGAACCGCAGCATGTGGTGCATGTCGATTATAGGCTG
CATACTAAGGTGTACATTATCGAGCACTTTCAATGCCACAGTGTTGAGCACGTCGTGCAG
GTCGTCGAGCAGCAGCGCGCCCCCCTCGCCCCGCGCCGCGCCCGCCGCCCCCGCGTCCCG
CACGCACCGCACCGCCACCTCCACCACGCCCACCTCGCTTATCAACTTTATTGACGCCTT
GTCGACGATCCGTTTGACGATGAGCGTGATGTTGTGCGCGAGCGGCACGTCCCGCAGACA
GCGCGGCAGCAGCGCCAGCAGCGGCCCGCTCCGGTACATGCCCTCCTCCGACACGTCCAG
CCAGATGTCCTCATCGAGTTGATCCTCAAGTGGAACGTCGCACTTGGTGAGTAACGCCGC
GCACGCCGCCGCCAGCTCCCACGAACCTTCGTATAGGGCTATCTGGTTGGCGAGGTGCAC
GTAGTAGTGGTGCGGCGGCGGGGCGAAGGCGCGTCGCTGCAGGGCGGCCGCGGCGCGCAC
GATGGCGGCGCGCACGCACTCCGCGCGGTGGTTACCCAGCACCACCAGCCGCTCCGCCAT
GCCGCTGCTCTGTGCGAACTCGTGGTCGGGCAGCATGGTGATGGCGTCTCGCAACAGCAG
CAGCAGTCCCTCGCAGGCCGCCCAGCCCGGCGCCGCGCCCGCTCGCACGCGACGCTGGTA
CATGCCGGTGGTGTATGTGTTGTCGTGCGGCGGCTGGTCGAGCTCGTCCATGTCCACCAC
GATGTAGTCCTGCAGCTCGTTCTCTTTCTGCTCACCCTCGCTGCCCCCGCCGCGATCGGT
GGTTGTGTCTGAGTGTTCCGATGTCGAGGACACGTGTTTCCAGCCCTCTTTTATTTGCGC
GTTAATAATTCCTTTCAAGTGTTTAGTGGATTCTAGACTACTCTCTATTCCTTCATTGTT
GTTGTTCTGCGACATGTCCTTGAGTAAGATGTCGTTGTTGTCCGTGGTCAGGTCTGCGGA
GTCGCCGGAGAGGCTGGGTCGGGGGAGCTCGGTGCGTTTGTATCGCTTGGATGACTTCCG
CTTGAACGAGTCCGTGAACTCGCTCGTTTCCTGCGTCTCGGCGGTTAGTAGGAAGTAGAA
GTTGGCTCTTGAGTGCGTGACGAATGTGTCGCTGGCCTGGTGCATGAGCAGCAGGAGCC
(5699 bp)

- SilkBase 1999-2023 -