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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23509c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_collagen_alpha-1(V)_chain_isoform_X5_[Bombyx_mori]
Ontology
GO:0001525 P angiogenesis
GO:0005198 F structural molecule activity
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005582 C collagen type XV trimer
GO:0005604 C basement membrane
GO:0005615 C extracellular space
GO:0005788 C endoplasmic reticulum lumen
GO:0007155 P cell adhesion
GO:0007165 P signal transduction
GO:0007275 P multicellular organism development
GO:0016021 C integral component of membrane
GO:0030154 P cell differentiation
GO:0030574 P collagen catabolic process
GO:0031012 C extracellular matrix
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:3.62 TPM:3.55
ORF EntryO_TrvaFAMAMG28666_5prime_partial:A_TrvaFAMAMG_TR23509c0_g2_i1
Sequence
(Nucleotide)
AATCTTTTTCATATTAAGATTTAGAGGTACAAGCCGGTCGGTTTTGAAAATGCTCAATGT
TCACTTATTATTATATTTCAACCATTCAAATTATTTATTAGCATTAAGAATAAATAATAT
TGTTCTTAAAACTGAATTATTACAATTTCCAGGAAACACTGGGATTCTTTAAACGCATTC
AAGTCTTTTGCAATCTTGAGCAATGCTCCATGATTGAATCGATTAAAATCATTCGAATTA
TAATATCGATGTAAAATCGATTATATTTAATTGTGTCTAATCAGTTGAGCAATATCGTTG
ATCAGTCGTTCGTATTCTTCTGGTAACATCTCGTGGTCTTCATCTAAATTATTTGTGCCA
TTATATCTATTTATATCTCTTTTTCTTCTCACACTTATATTCGAAGTCGCCTCTATACAT
AGCACAGCAAAACTATTGCTACACGAATACCTCTCCTGTGATAATATTTTATGTGAGAAC
AGCGAGGCGGCCATACCCTTGTGTGAGGGATTGTTATTCTGCCATTCGTCACAGAATGTA
TCTAATGCCCGTTCGCCGCTCGCGTGGGAACCATGCCAGATCACTTTCTGTGGCCAATGC
ATATCAGTGACGATATTTTTCCCGTTGAAGCTGTAGATCCGTGGAGAGCCAACCATGATG
CCTCCGTTCCCATCAAATATATCAGAAAATGATTTAAAAAGAACATCTCCTTGAGTATTC
ACTACGGGCAGGTGACGGTCTTTGTATCTTACTATGGAATCCAAGTTCTGGATCCTGCTA
GTTAGAAATGCTCTGAAAGTTCCTCTCAAGCCAGCTCGTCTCGCTTGTCTGTAACACGAA
TAGTCCGCCTTCCGAACTCCGTGCATATTACCAGAAAGAGGATCGTTGAGGGCTGCTAAA
CGGAGACTAGGACCAATAGGTGTTGCTGAGTTTTCTACCAGGTTAGACAGAGATGGCACA
TGTACCAGACTGGCGGCCGGCATCGGTAAGGGGGGAGGCGGAGGCGGTGTGACCGTCGGT
GGCTTTGTCTGCGTCACTAGCGAACCGAGAGAAACATACTGCCATCCAGAATTAACTTTG
AGGAACAACGCTTGTTCTTCAGCAACGTATGCTAAAGCACCAACGGGGCTT
(1131 bp)

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