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Last updated: 2022/11/18
NameA_TrvaFAMAMG_TR23509c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)
PREDICTED:_collagen_alpha-1(XVIII)_chain_isoform_X4_[Bombyx_mori]
Ontology
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005737 C cytoplasm
GO:0005788 C endoplasmic reticulum lumen
GO:0031012 C extracellular matrix
Transcript
Level
FPKM:0.56 TPM:0.55
ORF EntryO_TrvaFAMAMG28642_3prime_partial:A_TrvaFAMAMG_TR23509c0_g1_i3
Sequence
(Nucleotide)
GCTGTATGTCACGTTTCAGAAATGTCGAGTGTGAGCGTGTGTGAGTCCACGTGAATGACA
GTATCGCAGCGAAAGTGTTTTGATAAGTGAATTTCAATTTGAAATGTTGTGAGGATTACA
AAGATGGAGCGTTTCCGATACACTAGTCTACCATTCTTGTTGCTGGTGACCGCGTGTTGT
GCCACAGATGGAATGTTTGGCTCATCTATGTATCAAAATGATGTTCCTGAGTATGACTTA
CTCCACGCAATCGGGGTCCCGTTCAGCAACCCGAAGACCCAATACTTCGACGAGGGTTTA
GACGGGTTTCCAGCTTACGGTCTGATGCCAGGATCAGACATAAAGTCGCCCTACCGCCTC
TTCATGCCCGAGAAACTTTACTCCGAGTTCTCAATCACAGCAACTGTCAGACCAGCTAAC
AAAGATGGCGGGTTTCTGTTTTCGGTTGTCAATCCGCTGGAGACTGTGGTACAGTTGGGT
GTGCAGCTGATTCCTTCAGGGCCAGGGCTGATGAATATATCGCTGCTGTATACCGATGCT
AATGTGTACGCGTTGTCGCAGACGATAGCTTCGTTTGTGGTACCGACCTTTGCGAAGAAA
TGGAGCAGGTTCGCTCTGAAAGTGTCATTAGAAAATGTGACACTTTACTTGAACTGTCAT
GAATTTGACACTGTGGTTGTCAAAAGGAATCCAATGGAGCTGGTATTCGACTCTGCTTCC
ACTCTCTATGTGGGCCAAGCAGGACCTTTAATAAGAGGGGCTTTCCATGGAGCATTTCAA
GAGCTGAAACTATACGGATCTCCGACACAAGCAGAGGTGCAATGTATCAACACATTTGAG
GATATAGATAAAGGAGCTGAAGGGGACGAAATCGATATAGACAACTTTTTGGTGGATCAA
GAGGAAGATGGGGAAGGTTCTGGAAGGTACGGAACTATACCGCCATTTCCACCACCACCT
CCAGGCTTAGATGGTTATTCTCTGAGACTTCGCGGGGACAAAGGAGACCGAGGATCTAGG
GGACCTCCTGGAGAATCTATTAGAGGTCCACCTGGACCACCGGGACCGCCTGGACCTCCT
GGACCTCCAGGGTCAACGACAGAGAGCTCGGGATTCGGTGACGATCAAATCTTCGGAGAG
AACTACTCATCGCTCGGACAATGTGGTTGCAATGCAAGCACCATTTTGTCTCTGGTACAA
ACTGCACCTGAACTGAGGGGTCCTCCTGGGCCTCCGGGGATGGTAGGGGCTGATGGAAGA
ACAGGGCCCCCTGGAATGCCGGGTCAGCCTGGAGTTATCGGTGATCGTGGCCCAATGGGC
CCTAGAGGTGACAAAGGGGATAGGGGTGACTCTGGGCCAAGGGGTCACGAAGGGCAACCT
GGGCCAAAAGGTGAGGCAGGCGTGGACGGTCGTCCCGGAACTCCTGGACCACCCGGGCCA
CCGGGACCACCTGGAACTCCAGATTATAACAACTTTGAATCTAATTGGAAACCTAGGCAA
ATATACAAGGAATCTCTGATGGGAACATACGGAAGTGCCATCGGTAGACCCGGTGCTCCC
GGGCCTAAAGGTGATTCGGGGCAACCTGGACCAATCGGACCTCAAGGTGAACGAGGTTTC
CCTGGGCAGAAAGGGGAAAGAGGACAAGCAGGTGTAACAGGAACTAAAGGGGATCGGGGT
CATCCAGGATCACCAGGTGATAGGGGAATTAAAGGAGATCGTGGTAACCCAGGATTGGAT
GGTAGACCAGGTATTCCTGGTGCTAACGGAAGACCAGCAGACAAAGGCGAAAAGGGTGAA
CGTGGAGAACCTGGTCCTCCTGGTCCACCTACATCAGGAGTTTTTAATGGAGATTCCGAG
TTTATGGTTGCAGGTTCTCAACTTGAAAGTGTTAAAGGTGACAAAGGAGAAAAGGGTGAA
AAAGGAACTCGCGGCAATGATGGACCCCCAGGATTTCCAGGAAAAGACGGAAAGCCCGGT
GAGAGGGGTGACCTCGGGCCATCTGGGCTACCGGGCATGGCAGGGCCTGCTGGACCACAT
GGCCCTAAAGGAGATAGGGGGGAGAGAGGACCACCAGGACCTATCAGTGTTGCTTCTTCA
GGAACAGACATCATTACTGTAAAGGGTGACAAAGGTGACCCAGGTCTCAGAGGTCGGAGA
GGTCGGCCCGGGCCAAGCGGACCTCGTGGCATACAGGGCCTACAGGGCATACAGGGTCCT
CCAGGCCCATCCGGCCGTCCAGGGGATAAAGGGGAAACTGGACTACCAGGATGGATGAAC
TCAAAGGGTCGCCCAGGAACTCTTGGGCCACCAGGTGTGCCTGGCCCAGTGGGACCTAAA
GGTGAAAAGGGAGACCCGGGAGTGAATGTTTTAGATGTTTCTATGTTCAAAGGCGAAAAA
GGTGATCGAGGCTTTGACGGAACACCTGGTCTTCCAGGAGCTCAAGGTCCACCCGGTCCC
CCAGGGAAATCTGATTCCATACAATATATCCCAGGACCGCCTGGACCTCCTGGACCACCT
GGGACCCCTGGAGTTTCATTAGTAGGCCCTAAAGGTGAACCTGGAGCGGGATATTACGGA
GAGAGTACACACGGCAAAGAAACTATGTTTGGAAGACCAACATTCATATCAAAAAGCCAA
CTGACTGACGATTCCTATGGACAAAGAACAGTACCAGGCGCTGCTGTCTTCCAAACCACT
GAGGAAATGCTTAAGCTCGCATCATCAAGCCCCGTTGGTGCTTTAGCATAC
(2751 bp)

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