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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23503c0_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_dual_specificity_protein_kinase_CLK2_isoform_X6_[Bombyx_mori]
Ontology
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001964 P startle response
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004712 F protein serine/threonine/tyrosine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0006468 P protein phosphorylation
GO:0007275 P multicellular organism development
GO:0007350 P blastoderm segmentation
GO:0007399 P nervous system development
GO:0007417 P central nervous system development
GO:0007548 P sex differentiation
GO:0007601 P visual perception
GO:0008362 P chitin-based embryonic cuticle biosynthetic process
GO:0008407 P chaeta morphogenesis
GO:0009306 P protein secretion
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0030717 P oocyte karyosome formation
GO:0031987 P locomotion involved in locomotory behavior
GO:0034125 P negative regulation of MyD88-dependent toll-like receptor signaling pathway
GO:0035071 P salivary gland cell autophagic cell death
GO:0042051 P compound eye photoreceptor development
GO:0045494 P photoreceptor cell maintenance
GO:0046777 P protein autophosphorylation
GO:0048102 P autophagic cell death
GO:0048477 P oogenesis
GO:0048749 P compound eye development
GO:0048854 P brain morphogenesis
GO:0050896 P response to stimulus
GO:2000255 P negative regulation of male germ cell proliferation
Transcript
Level		FPKM:26.69 TPM:26.15
ORF EntryO_TrvaFAMAMG28573_complete:A_TrvaFAMAMG_TR23503c0_g1_i3
Sequence
(Nucleotide)
TTTTTTTTCAAGACTGACAGTCTTTATTTTAAAATAATAATTATTTTATAAATACAAATT
GAGAAGTACCGATTCACAACAAAATATTACCTATAATTAGAGCGTACGACAAAATATTTA
TCACTTATAGTTCATTATAATATGTACAGAATGTTCACACTTCACTTGTCTCACCGACTC
AACGAGTGTGACCGCGCGCGCTCATTGCCGAGCCTCTGATGCGGCGGCAGCTTGTTGAAG
AAGGGATGTTTGAGCGCGTCGCGGAGCGTGATGCGCTGCGCCGGCTCGTACTCCAGCATG
CGCGCGATCAGCTCGAACAGCTGCCGGGACTCCTCGTTGTTGTTCAACAAGTACCTCGTT
AGTGGTTTACAATTTTCTCTAACATATCTGCCGGCAGATGACTTCTCCTCCCAGTCCAGT
TTGCCGTGGTAGAAGTATTTCGTCCTAGTTTTCCGCGCCATTCTGTAGGGTATGGGTCCG
AGGATCCTCTCCATCATGGCGAGGTGCTCGCGGTTGTCGTGCGTCTGGAACAGCGTGATG
CCGAGGTACAGCTCGAACATGATGCAGCCGACCGACCACACGTCGCACGGCTGGGACCAC
CCCAGCTCTAATATAACTTCAGGCGCCCGGTAGTGCCTGGTGGACACGATGGTGCTGTGG
TGCTCGTGGTCGAAGGTGGCGCTGCCGAAGTCGATGAGTCTCACGTCGCTTCGCTTCACG
CGTCTCAGATCGTGGGTCTTCTTAGAGCTAGTGTATACGCTGACGACTTCATAATCGCTG
TCGACAAACAGTATGTTCTCGGGTTTGAGATCGGTGTGCGTCAGTTTGTTGTCGTGCAGG
AACAACACGCTGTAGATGAGCTGGTACGAGATGTGGCGGACCTGCTCTAGCGGGTAAGGT
TGGTAGTTGTTGTCTTTCAGGAAGTCGAATACACTTTGACCGAGCATCTCGAACGCGATG
CACATGTGACCGTGGTACTCGAACCAGTCCAACATCTTAACGCATAAATTTTTACAATCA
GGATCGACGTCAGCTAATTTTTCTAAAACGTTAATCTCTAGTTTGGCAGCCTCTCTGTAC
TTCTCGACGTTTTTGATAATCTTCAGAGCCATTCTGTGCTCCAATTCTAAATCTTTCACC
TCCACGACTTTGCCGAAGGTGCCCTCCCCGAGAGTGTCGATGATTTTGTATCTCGCTCCC
ATGACATATCCGGGCCAGTAGACGAGGTGTCCGTCCTTGTCGTCCTTGACGGAGGAGCGT
GCCCGGGAGCTCTGCTCAGGAGGTGAACGTGTAGTTGACTCGTCGCGGTGATGTCTCCTC
CGCCTGTGTGAAGTAGGCGAGCGTCGGTGATGTGACCGTTTGGAACGTTCATTTCTTCGC
CTCCACGAGTGCTCGGAGCTGTCACGTTCTCTGCTTCTACTGCGCTTTCTGTAAGTCCCC
TCCGCAGATCCGTCGTCGAGACGTCGCCGCTTCGCTTCGTACGACCGTGATCTGGACTGG
GAGTGGGAAGAGTAATGCTTTCTGCGTGTGCGTGGCATCATTAACAAGTATATCAAAACT
GGTATCCAAGCGGTTTAAGCCTAATATCACGCAAATGTTTTAATTTACACCAAAGTAGTT
GAGTAAAATTCGTCAAACAATTCCAAGTTCGTGATGCGGAACCTTGAAGTATACTTCTTC
GCAGTAAAGGCCCGAACATCGATCCGAAACCGAGAACAAGCCTCTCTTCTTGGTTGGTTG
TTTGACAGAGCGCAATGGCGTCAAATGAACTTCAAATGGCGACAAGTTTTATAATGAAAC
TATATAATTTTTGTATGGTTTCCACGGTTATCCTACACACAACAAAGTGTGATGATTATC
TATAAAATGAAAGTGTGCTTTTTTAACAGATTTTAAGTTTAACATTAGACACTATTTGAA
AAATTCAATGTAAAAAGTACAAAAACGG
(1948 bp)

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