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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23500c0_g2_i9
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0008150 P biological_process
GO:0030054 C cell junction
GO:0050896 P response to stimulus
Transcript
Level		FPKM:1.03 TPM:1.01
ORF EntryO_TrvaFAMAMG28550_5prime_partial:A_TrvaFAMAMG_TR23500c0_g2_i9
Sequence
(Nucleotide)
TGCTTTTGAATTGTGGTGTTAATGCTAAACCTATAGCTAAGGTAAAATGGTTGTATAATT
CTAAACCGTTAATATTTGAAAACAAAGATATGCTTAAATTACTGAAAATCCAGCAAAGAA
ACGCTGGAGTCTATAAATGCATAGTCAGTAACATACATGGAACCATATTTAGAGAATTCA
ACGTCTCTGTATTGGAGCCTCCATTTCTATTGGAATTTCATTTCTTGGATGTGTTATTGA
AAAAAGGGAGCAATGCTACTCTCGATTGTATAGCCAAAGGTACACCAACGCCTGCCATTA
AATGGACTTATAACAATACAAACTGGCAATCAGACGGTATTGCCATATCTAGCAATAACA
TAACAGAAGAATCGGAGGGCTTGTATCGTTGTGACGCAACAAACAAAGCTGGAAACGCAC
ATATGGTGTATAGGATTATTGTGGTTGCTGCTCCTCACATAGTTGATATTACATCCTTTA
CAGATGGTCAAGGAACTACTGTCAATGGAACAGTGGAAATCATTCTCAACAAACAGGCCA
GAATTTCTTGTAAAGCGAAAGGGAAACCCATACCAACGATACAATGGATTAAGAACGGTA
AAGTAGTTGGACAAAATCAGCCAGATCTAGACTATGCTAACTTATTTCTGGATAATGTGC
AAAACTCAAACGCTGGGATATACACATGTGTGGCTACTAACGAAGGCGGTAGTGATGAGA
ATAAAATGAAAATTGACGTGTTGGAACCACCACATATTTTCCACAACATCTTCCAAAGTG
ACAACATAACAAATAACGTGATTAACTTAGAAGTTATATCTGGGCAAGCTTTCTACCTGC
ACTGTCATCCTACCGGCAATCCTTGGCCAGAAATATACTGGTTCAGAGATGACCTTCCCT
TAATATTCTATGATGAGACGATGGTCTCAACTGAATTTAGCGAGGTTATTGTGTCAAAGA
GTGCTTTGTTGGAACAGTCTGGGAATTATACTTGTATTGTGAAAAACAAGGTCGGAAATA
ACAGTGCTAGTTATGTTGTTGATGTTTTGGTACCACCACCAATTCCAAAGGAAAAAACGA
GAATGGTTTCAGCGCGATTGGGACAGTCTGTCGAACTGAAATGCCCCGTCGAAGGCAGTC
CACTTCCCGATGTCATGTGGATTAAACATCCTTATACGGAAATAGACAAGAATGCTGCAA
AAATGTGGTTGATGGACGAAAATATTACTTTGATCTTGAATAACACTGAAATTTCGGATA
GTGGCAAATATTCCTGCATAATGACAAACAAAGTCGGAACTACTGAAGTAGAATTTGATT
TAACTGTTTTAAAAGCGCCGTTCATTGCCGCTAACGAGAGGGGTGATTTTGTTGAAGATC
ATGTGCTATCATTGAAAAGAAGCATTGTACTTAAATGCGAGGCTGATGGACATCCTGCGC
CGAAAATTACATGGTTGAAGGACACGCAACAACTAAGCGACAGTGCATCAAACATCCGTC
GTGTCGCAGGCAACAGTTTGCTGGCGATAGTCGCTGCGACCAGTCGCGATGCCGCTCAGT
ACATCTGCATCGCGGAGAACGACGCTGGCACTGCGCATAGGCGATACAACATCGCTGTAC
AGGTTCCTGGTAAATGGAGTGACTGGTCCCGTTGGTCATACTGCAACGTGACCTGCGGAC
CTGGATATCAGACTCGTTCCCGAAGCTGTCAGTACATTGATGACTATAATAATATTATAG
ATAAAACTAGTCAGTCAGATAAAATCATACTTGATGAGACGAAGTGCAAGGGACCGGATG
CTGATAAAAGGAAATGTCAAATGCCGTCCTGTGAGGAAGCAGAGGACCGCCCGAAGTGGT
CTGTGTGGTCCGCCTGGTCGACTTGTAGCGCTAGTTGCGGCGCCGGGACTCAAACTCGGA
CCCGGCGGTGTACGACCAAGCTGCGATGTACCGGAGACAATGTACAGGTGCGGAACTGTC
CTAGTCTACCCAAGTGTAAAGATTCCACTACTCGTACTGAAAACGATGGACTCCACAATA
CACAACATCGCGAAGACAATGAAGTATACATTCCGGAAGCCGTGTATGAAATGCAGCCTG
AAATCATCAAGTCTAAATACTCGCCTGACGTCGAACACTTCTACGTTGCAACAGAAACTA
AAAGGGAGACAGTTTCCTTTGATGTGAACGTGACGAGCAATCTGGATCGAAGCGAGCAAG
GTCGATGCGACCCCGGATACACGTACAATAGAACAACAGACGCGTGTCATGATATCGACG
AGTGTCAGATAAAGTACAACGAGTGCCATGCGAGCCAGTACTGCGCTAACACGGCGGGCG
GGTACCGCTGCGGCTGTCCCTCGGGGTACCTCGCGTTGGGCGTCGGACAACGCTGCTTGG
ATATAAACGAGTGCGTGCAGAACATAGCGGGCTGCGAGTACGCGTGCGTGAACACGGCGG
GCGGGTACGTGTGTGCGTGCCCCAAACACTTGAGACTTCACATCGACAAGCACAGATGTG
TGCCAGCATCGGTATACAACGATCCAAACTATAAGGATGATAGTGAAGAACTAAGTTCTT
CAAATGAATATCCTATGAGGTACAGAAGGAATGGAAATAAATAAAATGTGTTTAACAAAA
CTATCTTTTTATTTGATTTATAATATAGCTCTATATAGAAAATATTAGTGACGAGATACT
AATCCAATGTGAGTCATATCATATACAGGGTGTATTTTAAGTCAGTTTCGTCTCGAAAAT
TAATAATAACAGCCTGTGTAACAGACGAAATATGGGGGTGTCGCGACGGGAAAGTGTGCC
GCAGTGCGGAACGCGTCGCGCCACCTCTA
(2849 bp)

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