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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23500c0_g2_i5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0007601 P visual perception
GO:0030054 C cell junction
GO:0031012 C extracellular matrix
GO:0050896 P response to stimulus
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:1.09 TPM:1.07
ORF EntryO_TrvaFAMAMG28535_complete:A_TrvaFAMAMG_TR23500c0_g2_i5
Sequence
(Nucleotide)
CACTTCACATTATAAATATTATTATACCGTCCAAAACAGCTCAACAAACAGGCCAGAATT
TCTTGTAAAGCGAAAGGGAAACCCATACCAACGATACAATGGATTAAGAACGGTAAAGTA
GTTGGACAAAATCAGCCAGATCTAGACTATGCTAACTTATTTCTGGATAATGTGCAAAAC
TCAAACGCTGGGATATACACATGTGTGGCTACTAACGAAGGCGGTAGTGATGAGAATAAA
ATGAAAATTGACGTGTTGGAACCACCACATATTTTCCACAACATCTTCCAAAGTGACAAC
ATAACAAATAACGTGATTAACTTAGAAGTTATATCTGGGCAAGCTTTCTACCTGCACTGT
CATCCTACCGGCAATCCTTGGCCAGAAATATACTGGTTCAGAGATGACCTTCCCTTAATA
TTCTATGATGAGACGATGGTCTCAACTGAATTTAGCGAGGTTATTGTGTCAAAGAGTGCT
TTGTTGGAACAGTCTGGGAATTATACTTGTATTGTGAAAAACAAGGTCGGAAATAACAGT
GCTAGTTATGTTGTTGATGTTTTGGTACCACCACCAATTCCAAAGGAAAAAACGAGAATG
GTTTCAGCGCGATTGGGACAGTCTGTCGAACTGAAATGCCCCGTCGAAGGCAGTCCACTT
CCCGATGTCATGTGGATTAAACATCCTTATACGGAAATAGACAAGAATGCTGCAAAAATG
TGGTTGATGGACGAAAATATTACTTTGATCTTGAATAACACTGAAATTTCGGATAGTGGC
AAATATTCCTGCATAATGACAAACAAAGTCGGAACTACTGAAGTAGAATTTGATTTAACT
GTTTTAAAAGCGCCGTTCATTGCCGCTAACGAGAGGGGTGATTTTGTTGAAGATCATGTG
CTATCATTGAAAAGAAGCATTGTACTTAAATGCGAGGCTGATGGACATCCTGCGCCGAAA
ATTACATGGTTGAAGGACACGCAACAACTAAGCGACAGTGCATCAAACATCCGTCGTGTC
GCAGGCAACAGTTTGCTGGCGATAGTCGCTGCGACCAGTCGCGATGCCGCTCAGTACATC
TGCATCGCGGAGAACGACGCTGGCACTGCGCATAGGCGATACAACATCGCTGTACAGGTT
CCTGGTAAATGGAGTGACTGGTCCCGTTGGTCATACTGCAACGTGACCTGCGGACCTGGA
TATCAGACTCGTTCCCGAAGCTGTCAGTACATTGATGACTATAATAATATTATAGATAAA
ACTAGTCAGTCAGATAAAATCATACTTGATGAGACGAAGTGCAAGGGACCGGATGCTGAT
AAAAGGAAATGTCAAATGCCGTCCTGTGAGGAAGCAGAGGACCGCCCGAAGTGGTCTGTG
TGGTCCGCCTGGTCGACTTGTAGCGCTAGTTGCGGCGCCGGGACTCAAACTCGGACCCGG
CGGTGTACGACCAAGCTGCGATGTACCGGAGACAATGTACAGGTGCGGAACTGTCCTAGT
CTACCCAAGTGTAAAGATTCCACTACTCGTACTGAAAACGATGGACTCCACAATACACAA
CATCGCGAAGACAATGAAGTATACATTCCGGAAGCCGTGTATGAAATGCAGCCTGAAATC
ATCAAGTCTAAATACTCGCCTGACGTCGAACACTTCTACGTTGCAACAGAAACTAAAAGG
GAGACAGTTTCCTTTGATGTGAACGTGACGAGCAATCTGGATCGAAGCGAGCAAGGTCGA
TGCGACCCCGGATACACGTACAATAGAACAACAGACGCGTGTCATGATATCGACGAGTGT
CAGATAAAGTACAACGAGTGCCATGCGAGCCAGTACTGCGCTAACACGGCGGGCGGGTAC
CGCTGCGGCTGTCCCTCGGGGTACCTCGCGTTGGGCGTCGGACAACGCTGCTTGGATATA
AACGAGTGCGTGCAGAACATAGCGGGCTGCGAGTACGCGTGCGTGAACACGGCGGGCGGG
TACGTGTGTGCGTGCCCCAAACACTTGAGACTTCACATCGACAAGCACAGATGTGTGCCA
GCATCGGTATACAACGATCCAAACTATAAGGATGATAGTGAAGAACTAAGTTCTTCAAAT
GAATATCCTATGAGGTACAGAAGGAATGGAAATAAATAAAATGTGTTTAACAAAACTATC
TTTTTATTTGATTTATAATATAGCTCTATATAGAAAATATTAGTGACGAGATACTAATCC
AATGTGAGTCATATCATATACAGGGTGTATTTTAAGTCAGTTTCGTCTCGAAAATTAATA
ATAACAGCCTGTGTAACAGACGAAATATGGGGGTGTCGCGACGGGAAAGTGTGCCGCAGT
GCGGAACGCGTCGCGCCACCTCTA
(2364 bp)

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