SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23500c0_g2_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0007601 P visual perception
GO:0030054 C cell junction
GO:0031012 C extracellular matrix
GO:0050896 P response to stimulus
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.36 TPM:0.36
ORF EntryO_TrvaFAMAMG28530_complete:A_TrvaFAMAMG_TR23500c0_g2_i3
Sequence
(Nucleotide)
TGCTTTTGAATTGTGGTGTTAATGCTAAACCTATAGCTAAGGTAAAATGGTTGTATAATT
CTAAACCGTTAATATTTGAAAACAAAGATATGCTTAAATTACTGAAAATCCAGCAAAGAA
ACGCTGGAGTCTATAAATGCATAGTCAGTAACATACATGGAACCATATTTAGAGAATTCA
ACGTCTCTGTATTGGAGCCTCCATTTCTATTGGAATTTCATTTCTTGGATGTGTTATTGA
AAAAAGGGAGCAATGCTACTCTCGATTGTATAGCCAAAGGTACACCAACGCCTGCCATTA
AATGGACTTATAACTCAACAAACAGGCCAGAATTTCTTGTAAAGCGAAAGGGAAACCCAT
ACCAACGATACAATGGATTAAGAACGGTAAAGTAGTTGGACAAAATCAGCCAGATCTAGA
CTATGCTAACTTATTTCTGGATAATGTGCAAAACTCAAACGCTGGGATATACACATGTGT
GGCTACTAACGAAGGCGGTAGTGATGAGAATAAAATGAAAATTGACGTGTTGGAACCACC
ACATATTTTCCACAACATCTTCCAAAGTGACAACATAACAAATAACGTGATTAACTTAGA
AGTTATATCTGGGCAAGCTTTCTACCTGCACTGTCATCCTACCGGCAATCCTTGGCCAGA
AATATACTGGTTCAGAGATGACCTTCCCTTAATATTCTATGATGAGACGATGGTCTCAAC
TGAATTTAGCGAGGTTATTGTGTCAAAGAGTGCTTTGTTGGAACAGTCTGGGAATTATAC
TTGTATTGTGAAAAACAAGGTCGGAAATAACAGTGCTAGTTATGTTGTTGATGTTTTGGT
ACCACCACCAATTCCAAAGGAAAAAACGAGAATGGTTTCAGCGCGATTGGGACAGTCTGT
CGAACTGAAATGCCCCGTCGAAGGCAGTCCACTTCCCGATGTCATGTGGATTAAACATCC
TTATACGGAAATAGACAAGAATGCTGCAAAAATGTGGTTGATGGACGAAAATATTACTTT
GATCTTGAATAACACTGAAATTTCGGATAGTGGCAAATATTCCTGCATAATGACAAACAA
AGTCGGAACTACTGAAGTAGAATTTGATTTAACTGTTTTAAAAGCGCCGTTCATTGCCGC
TAACGAGAGGGGTGATTTTGTTGAAGATCATGTGCTATCATTGAAAAGAAGCATTGTACT
TAAATGCGAGGCTGATGGACATCCTGCGCCGAAAATTACATGGTTGAAGGACACGCAACA
ACTAAGCGACAGTGCATCAAACATCCGTCGTGTCGCAGGCAACAGTTTGCTGGCGATAGT
CGCTGCGACCAGTCGCGATGCCGCTCAGTACATCTGCATCGCGGAGAACGACGCTGGCAC
TGCGCATAGGCGATACAACATCGCTGTACAGGTTCCTGGTAAATGGAGTGACTGGTCCCG
TTGGTCATACTGCAACGTGACCTGCGGACCTGGATATCAGACTCGTTCCCGAAGCTGTCA
GTACATTGATGACTATAATAATATTATAGATAAAACTAGTCAGTCAGATAAAATCATACT
TGATGAGACGAAGTGCAAGGGACCGGATGCTGATAAAAGGAAATGTCAAATGCCGTCCTG
TGAGGAAGCAGAGGACCGCCCGAAGTGGTCTGTGTGGTCCGCCTGGTCGACTTGTAGCGC
TAGTTGCGGCGCCGGGACTCAAACTCGGACCCGGCGGTGTACGACCAAGCTGCGATGTAC
CGGAGACAATGTACAGGTGCGGAACTGTCCTAGTCTACCCAAGTGTAAAGATTCCACTAC
TCGTACTGAAAACGATGGACTCCACAATACACAACATCGCGAAGACAATGAAGTATACAT
TCCGGAAGCCGTGTATGAAATGCAGCCTGAAATCATCAAGTCTAAATACTCGCCTGACGT
CGAACACTTCTACGTTGCAACAGAAACTAAAAGGGAGACAGTTTCCTTTGATGTGAACGT
GACGAGCAATCTGGATCGAAGCGAGCAAGGTCGATGCGACCCCGGATACACGTACAATAG
AACAACAGACGCGTGTCATGATATCGACGAGTGTCAGATAAAGTACAACGAGTGCCATGC
GAGCCAGTACTGCGCTAACACGGCGGGCGGGTACCGCTGCGGCTGTCCCTCGGGGTACCT
CGCGTTGGGCGTCGGACAACGCTGCTTGGATATAAACGAGTGCGTGCAGAACATAGCGGG
CTGCGAGTACGCGTGCGTGAACACGGCGGGCGGGTACGTGTGTGCGTGCCCCAAACACTT
GAGACTTCACATCGACAAGCACAGATGTGTGCCAGCATCGGTATACAACGATCCAAACTA
TAAGGATGATAGTGAAGAACTAAGTTCTTCAAATGAATATCCTATGAGGTACAGAAGGAA
TGGAAATAAATAAAATGTGTTTAACAAAACTATCTTTTTATTTGATTTATAATATAGCTC
TATATAGAAAATATTAGTGACGAGATACTAATCCAATGTGAGTCATATCATATACAGGGT
GTATTTTAAGTCAGTTTCGTCTCGAAAATTAATAATAACAGCCTGTGTAACAGACGAAAT
ATGGGGGTGTCGCGACGGGAAAGTGTGCCGCAGTGCGGAACGCGTCGCGCCACCTCTA
(2638 bp)

- SilkBase 1999-2023 -