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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23500c0_g2_i11
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0008150 P biological_process
GO:0030054 C cell junction
GO:0050896 P response to stimulus
Transcript
Level		FPKM:0.54 TPM:0.53
ORF EntryO_TrvaFAMAMG28558_3prime_partial:A_TrvaFAMAMG_TR23500c0_g2_i11
Sequence
(Nucleotide)
CACTTCACATTATAAATATTATTATACCGTCCAAAACAGCTCAACAAACAGGCCAGAATT
TCTTGTAAAGCGAAAGGGAAACCCATACCAACGATACAATGGATTAAGAACGGTAAAGTA
GTTGGACAAAATCAGCCAGATCTAGACTATGCTAACTTATTTCTGGATAATGTGCAAAAC
TCAAACGCTGGGATATACACATGTGTGGCTACTAACGAAGGCGGTAGTGATGAGAATAAA
ATGAAAATTGACGTGTTGGAACCACCACATATTTTCCACAACATCTTCCAAAGTGACAAC
ATAACAAATAACGTGATTAACTTAGAAGTTATATCTGGGCAAGCTTTCTACCTGCACTGT
CATCCTACCGGCAATCCTTGGCCAGAAATATACTGGTTCAGAGATGACCTTCCCTTAATA
TTCTATGATGAGACGATGGTCTCAACTGAATTTAGCGAGGTTATTGTGTCAAAGAGTGCT
TTGTTGGAACAGTCTGGGAATTATACTTGTATTGTGAAAAACAAGGTCGGAAATAACAGT
GCTAGTTATGTTGTTGATGTTTTGGTACCACCACCAATTCCAAAGGAAAAAACGAGAATG
GTTTCAGCGCGATTGGGACAGTCTGTCGAACTGAAATGCCCCGTCGAAGGCAGTCCACTT
CCCGATGTCATGTGGATTAAACATCCTTATACGGAAATAGACAAGAATGCTGCAAAAATG
TGGTTGATGGACGAAAATATTACTTTGCGCCGTTCATTGCCGCTAACGAGAGGGGTGATT
TTGTTGAAGATCATGTGCTATCATTGAAAAGAAGCATTGTACTTAAATGCGAGGCTGATG
GACATCCTGCGCCGAAAATTACATGGTTGAAGGACACGCAACAACTAAGCGACAGTGCAT
CAAACATCCGTCGTGTCGCAGGCAACAGTTTGCTGGCGATAGTCGCTGCGACCAGTCGCG
ATGCCGCTCAGTACATCTGCATCGCGGAGAACGACGCTGGCACTGCGCATAGGCGATACA
ACATCGCTGTACAGGTTCCTGGTAAATGGAGTGACTGGTCCCGTTGGTCATACTGCAACG
TGACCTGCGGACCTGGATATCAGACTCGTTCCCGAAGCTGTCAGTACATTGATGACTATA
ATAATATTATAGATAAAACTAGTCAGTCAGATAAAATCATACTTGATGAGACGAAGTGCA
AGGGACCGGATGCTGATAAAAGGAAATGTCAAATGCCGTCCTGTGAGGAAGCAGAGGACC
GCCCGAAGTGGTCTGTGTGGTCCGCCTGGTCGACTTGTAGCGCTAGTTGCGGCGCCGGGA
CTCAAACTCGGACCCGGCGGTGTACGACCAAGCTGCGATGTACCGGAGACAATGTACAGG
TGCGGAACTGTCCTAGTCTACCCAAGTGTAAAGATTCCACTACTCGTACTGAAAACGATG
GACTCCACAATACACAACATCGCGAAGACAATGAAGTATACATTCCGGAAGCCGTGTATG
AAATGCAGCCTGAAATCATCAAGTCTAAATACTCGCCTGACGTCGAACACTTCTACGTTG
CAACAGATATCGACGAGTGTCAGATAAAGTACAACGAGTGCCATGCGAGCCAGTACTGCG
CTAACACGGCGGGCGGGTACCGCTGCGGCTGTCCCTCGGGGTACCTCGCGTTGGGCGTCG
GACAACGCTGCTTGGATATAAACGAGTGCGTGCAGAACATAGCGGGCTGCGAGTACGCGT
GCGTGAACACGGCGGGCGGGTACGTGTGTGCG
(1772 bp)

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