SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23500c0_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0008150 P biological_process
GO:0030054 C cell junction
GO:0050896 P response to stimulus
Transcript
Level		FPKM:0.54 TPM:0.53
ORF EntryO_TrvaFAMAMG28527_complete:A_TrvaFAMAMG_TR23500c0_g2_i1
Sequence
(Nucleotide)
TGCTTTTGAATTGTGGTGTTAATGCTAAACCTATAGCTAAGGTAAAATGGTTGTATAATT
CTAAACCGTTAATATTTGAAAACAAAGATATGCTTAAATTACTGAAAATCCAGCAAAGAA
ACGCTGGAGTCTATAAATGCATAGTCAGTAACATACATGGAACCATATTTAGAGAATTCA
ACGTCTCTGTATTGGAGCCTCCATTTCTATTGGAATTTCATTTCTTGGATGTGTTATTGA
AAAAAGGGAGCAATGCTACTCTCGATTGTATAGCCAAAGGTACACCAACGCCTGCCATTA
AATGGACTTATAACAATACAAACTGGCAATCAGACGGTATTGCCATATCTAGCAATAACA
TAACAGAAGAATCGGAGGGCTTGTATCGTTGTGACGCAACAAACAAAGCTGGAAACGCAC
ATATGGTGTATAGGATTATTGTGGTTGCTGCTCCTCACATAGTTGATATTACATCCTTTA
CAGATGGTCAAGGAACTACTGTCAATGGAACAGTGGAAATCATTCTCAACAAACAGGCCA
GAATTTCTTGTAAAGCGAAAGGGAAACCCATACCAACGATACAATGGATTAAGAACGGTA
AAGTAGTTGGACAAAATCAGCCAGATCTAGACTATGCTAACTTATTTCTGGATAATGTGC
AAAACTCAAACGCTGGGATATACACATGTGTGGCTACTAACGAAGGCGGTAGTGATGAGA
ATAAAATGAAAATTGACGTGTTGGAACCACCACATATTTTCCACAACATCTTCCAAAGTG
ACAACATAACAAATAACGTGATTAACTTAGAAGTTATATCTGGGCAAGCTTTCTACCTGC
ACTGTCATCCTACCGGCAATCCTTGGCCAGAAATATACTGGTTCAGAGATGACCTTCCCT
TAATATTCTATGATGAGACGATGGTCTCAACTGAATTTAGCGAGGTTATTGTGTCAAAGA
GTGCTTTGTTGGAACAGTCTGGGAATTATACTTGTATTGTGAAAAACAAGGTCGGAAATA
ACAGTGCTAGTTATGTTGTTGATGTTTTGGTACCACCACCAATTCCAAAGGAAAAAAACG
AGAATGGTTTCAGCGCGATTGGGACAGTCTGTCGAACTGAAATGCCCCGTCGAAGGCAGT
CCACTTCCCGATGTCATGTGGATTAAACATCCTTATACGGAAATAGACAAGAATGCTGCA
AAAATGTGGTTGATGGACGAAAATATTACTTTGATCTTGAATAACACTGAAATTTCGGAT
AGTGGCAAATATTCCTGCATAATGACAAACAAAGTCGGAACTACTGAAGTAGAATTTGAT
TTAACTGTTTTAAAAGCGCCGTTCATTGCCGCTAACGAGAGGGGTGATTTTGTTGAAGAT
CATGTGCTATCATTGAAAAGAAGCATTGTACTTAAATGCGAGGCTGATGGACATCCTGCG
CCGAAAATTACATGGTTGAAGGACACGCAACAACTAAGCGACAGTGCATCAAACATCCGT
CGTGTCGCAGGCAACAGTTTGCTGGCGATAGTCGCTGCGACCAGTCGCGATGCCGCTCAG
TACATCTGCATCGCGGAGAACGACGCTGGCACTGCGCATAGGCGATACAACATCGCTGTA
CAGGTTCCTGGTAAATGGAGTGACTGGTCCCGTTGGTCATACTGCAACGTGACCTGCGGA
CCTGGATATCAGACTCGTTCCCGAAGCTGTCAGTACATTGATGACTATAATAATATTATA
GATAAAACTAGTCAGTCAGATAAAATCATACTTGATGAGACGAAGTGCAAGGGACCGGAT
GCTGATAAAAGGAAATGTCAAATGCCGTCCTGTGAGGAAGCAGAGGACCGCCCGAAGTGG
TCTGTGTGGTCCGCCTGGTCGACTTGTAGCGCTAGTTGCGGCGCCGGGACTCAAACTCGG
ACCCGGCGGTGTACGACCAAGCTGCGATGTACCGGAGACAATGTACAGGTGCGGAACTGT
CCTAGTCTACCCAAGTGTAAAGATTCCACTACTCGTACTGAAAACGATGGACTCCACAAT
ACACAACATCGCGAAGACAATGAAGTATACATTCCGGAAGCCGTGTATGAAATGCAGCCT
GAAATCATCAAGTCTAAATACTCGCCTGACGTCGAACACTTCTACGTTGCAACAGATATC
GACGAGTGTCAGATAAAGTACAACGAGTGCCATGCGAGCCAGTACTGCGCTAACACGGCG
GGCGGGTACCGCTGCGGCTGTCCCTCGGGGTACCTCGCGTTGGGCGTCGGACAACGCTGC
TTGGATATAAACGAGTGCGTGCAGAACATAGCGGGCTGCGAGTACGCGTGCGTGAACACG
GCGGGCGGGTACGTGTGTGCGTGCCCCAAACACTTGAGACTTCACATCGACAAGCACAGA
TGTGTGCCAGCATCGGTATACAACGATCCAAACTATAAGGATGATAGTGAAGAACTAAGT
TCTTCAAATGAATATCCTATGAGGTACAGAAGGAATGGAAATAAATAAAATGTGTTTAAC
AAAACTATCTTTTTATTTGATTTATAATATAGCTCTATATAGAAAATATTAGTGACGAGA
TACTAATCCAATGTGAGTCATATCATATACAGGGTGTATTTTAAGTCAGTTTCGTCTCGA
AAATTAATAATAACAGCCTGTGTAACAGACGAAATATGGGGGTGTCGCGACGGGAAAGTG
TGCCGCAGTGCGGAACGCGTCGCGCCACCTCTA
(2733 bp)

- SilkBase 1999-2023 -