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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23500c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005938 C cell cortex
GO:0007601 P visual perception
GO:0030054 C cell junction
GO:0031012 C extracellular matrix
GO:0050896 P response to stimulus
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.57 TPM:0.56
ORF EntryO_TrvaFAMAMG28525_5prime_partial:A_TrvaFAMAMG_TR23500c0_g1_i2
Sequence
(Nucleotide)
GCATTAACACCACAATTCAAAAGCAAGTCATCTTCTTTTATAACCTCAACATTTTCATCT
ACCGTCATTAAGAACGCTGGCGGCCATTGCACGTCGAGCGCTACGTACGCAAGGGCACTA
CCCGCAGTATTAGTTGCAACGCACGCAAGCACGGACGTATTGTCGCGTGAGATATTTTTA
ATGACAAGGTTACCAGATGAGACTAATTTTGCATCCTTGTACCATTTAATGGAATTGATG
TTTGATCCTCGGACAGGACATAAGATATTGACGTCGCTCCCTTCGACCACACCCACTTTG
ATGAGAGTTTCATCTGACTGAATCTGTTTGGGCACAGAATATATTAAGACTTCAAAAGTT
TTATTGCCATTTCCGTAATTATTCCAGGCGACACATGTGTAATTGCCACTGAGTTCCTCT
TTGGGTGCAATTATTTCGAATCTTCCATTCACATCTATATTGTACCTTGGGTCGTGATTT
AAATAAAACCCATCCTTATACCACAAGACATAAGGTTTAGGTTTACCAGTTGCTGCACAA
TACAATGATAAAGATCGATCCATTTCGGTTGCCACATACGGACCAGTATAGTTATCGTCT
AATATCTTTGGTGGTTCATTAACAACAATAAAAGTTGTCTTAATGGCAACACCGGCAATG
TTGCTGGCAACACAACCATAGGCTCCCTCGCTTGCTAAAGTAATGTTCGTCAAATATAAA
TTACCGTATTCGTTGTAACTTAACGTAGTTGTGTTTTCAGATATAACATTTCCTCCATAT
TCCCAAGTAACGTCGGGAATGGGGAAACCAACAACATCGCATTGTACAGTTACATTATCA
CCGGAAAAAACTTGTTTCGTTAATCGTAAAGGCGGATCTATGCTTGGAGCCACCCAAACC
AAAACAGAATAGGTTATAGAATCATTTCCATATTCATTGCTGGCAACACATGAATAATTA
CCAAAATCTGTTATGTTTGCCACGAATCTTATTCCATTTTCATCGATCTGTCTTCTATCA
TCGTGTATTGCCTCGTCGTTATGTTTCCATAAAACTTCAGGAATAGGTACTCCTTTTGAT
CTACATGGCAACTCAACCAGTTGACCTTCTAAGAATTGCTGAACAGGTTGTAACGACGAT
GGAAGTATTTTAGGAGTTGCATAACTTTTAAGTGTAAAGTTCCTGTGAATTGATCCTAAC
GCATTCGAAACATTGCACGAGTAAAGTCCAGCGTTATGTTCCGTGACATTGTCTATGACC
AGAATTTCTGGTTCAATCAAGTACACATTTTTGGAGAAAGCAACGGGTAGACCATTTTTA
GTCCAGACTACAATCGGTGTTGGGGAACCGGTAGTATTACATGAAAATGTAACTTTTTTA
CCAATTTCTATGGAACTTGTCACATTTTCTATCCATTCTGAAGGTACAATTGACTGAGGA
GCATATTGAACTACTAGTTGTGTATCATGCGTGTCGCTGCCTATTACATTTTCTACTTTA
CACCGATATGTTCCAGATTGTTCTAAAGAAATTTCAGATAGGACAATTTTGTTTTGATCG
GTGTAATCTACAAGGAAGGTGCTAAAATCTTTTGCAGATACATTTTTGAACATCCACGAG
ACAGTCGGCTCTGGGTTTCCTTTAAAGATCCTACATGTAATATTTGTTGTATCTCCTTTA
CGAACGACCACATTTTTTGTTTCTTTAGATAATTGCGGTAATTCCAATCCCGTAACAGTA
ACAGTTGCATTATACGACATTGTTTCGTAACCATTTTCGGCAACACAAGTATATCGACCA
AAGTTGGAAAAATCCATTTTCTTGACAAGTAAAACAGAACTATCTTTAGACAAATCGATG
TTTTCGTTCTTCTGCAGTTCTGTTCCGTTGTGATACCATTTCAAAGTCGGTGGAGGGTAA
GAATCGACATCACACTGAAGTTTTATTTGCGAGTATAACTGTGTTGTAATGTCGTTAAAA
TCATGAAGTAGAAACATTTTTCGTCTAATTTGAACCGTAACGCTGTCTTCTGAAATGCCT
TCCGAATTCTCCCCTATGCAGAAATACGTGTCTTGTACTTGTTCTTTGCTACTGTCTAAT
TTCAGCACACTTTTATATAAATTGTGTCCTACCGAAGTCGTAACACAATCCAGGAATTCT
TCAGTTTCTCTATGCCATATTACTCGAGGTATAGGTTTCGCTAGTATTTCACAATTGATT
TCGTAGATAGATCCATTCAGTATAGTAATACTTTTAGATCCAATAATTTTGACACTTGGT
TTTATTTTTATGTTTATTTGAACGGAATCTGACACATTAAGTTTCCCGCGACGAGCTAAA
CACGTCCATGTACCATCTTCACTAACATTCCTTACATTGAGAACAAAGTCGGAACTAAGC
TTTACTGTTTGATTCACCACTACACTCCCGTTAGGAGCTATCCATTGCATCGACTCTGCT
CTGTCTACATGACACACAAGTTGTACATCAGAATGTATTTCACTAGATATTGTGTGTGGA
CCAAGAATTTGTGTATTAGGTTTTGCGTTAACCTTTATCATGATAGTTTTATTTGATTCT
CCGGCTTCATTGGAAGCTGAACAAGAATAGTTTCCAGCGTATTTTTCTGATATATTGCGT
ATAATAACACTGAAAGAATATTTTCCTTCTGTATTCAACTCCGGACTTACTTCAGAGGAA
TTCTCAAAATTGTTTCCTTTGAAGTTGAGTCGATATTTAAGCAGAAGTGATTCACTGAAG
GCAGTACATGTAATGTTCAGTTCATTTCCTTCATCCAACGTTTTATTACCAGGTTCAATA
TAAATCTCTGGTGGATTGACTAGTTTGGTTACAGTTGTGTTTATCACAATTTTATCGTAT
CCATCGTCGGCCATACATGAATATTGTCCAAAGTCTGAGGTGTTCATACTCTTGATTTTT
AAAATAGTGTTGCCAGCGAATATGTGCGTATTTTCGTTGTTTTCCAGTTTTATACCATTA
TGGTACCACTTTATAATCGGTGGCGGATGTGAATCAACATTACAGTGCAGATTTAGTTGT
GAATATAATTTGGTCCTTGTATAACACAATCCAGAAATTGTTCAGTTTCCTTGTGCCATA
TCACTCTAGGTAAAGGCTTGGCTAATATTTCACAGTGAATTTCATATATCGTTCCATTCA
AAATGGTAACATTTTTAGGTCCAATAATTGCTACTCTTGGTTTTATTTGCACATTAATCT
GAACGGAATCTGAAGCATTGACTTTCCCGTTTTGTGCTACACATGTCCACCTTCCATCGT
CACAAACATTTTTTAGATTAAGAACAAAATCAGAGCTGGCTTCGGTTTTTTGATTCATTA
CTATACTACCGTTAGGAGCCAACCATTGCATCGACTCTGCCTTTTCTACATGACATACAA
GTTGTACATCAGAATGAAGTGGACTAGATATCGTGTGTGGACCTAGTATTTGAGAATTGG
GTTTCGAATTGACCTTTATGACTATTGTTTTGTTCATTTCCCCGCCTTCATTGGTAGCTG
AACACGAATAATTTCCAGAAAAATTCTCAGATACATTGCGTATTATGACGCTAAAAGCAT
ATTTTCCATCAGCATTTAATTCTGGTTGTACATCAGAGGATTTTTCAAATTTA
(3653 bp)

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