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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23498c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		RNA_binding_motif_protein_X-linked_2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000384 F first spliceosomal transesterification activity
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005686 C U2 snRNP
GO:0006406 P mRNA export from nucleus
GO:0044822 F RNA binding
GO:0070274 C RES complex
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:8.71 TPM:8.54
ORF EntryO_TrvaFAMAMG28462_complete:A_TrvaFAMAMG_TR23498c0_g1_i1
Sequence
(Nucleotide)
TTGTTACTTTTTTCCCATTTTTTTCCAGTATCCGTGTTGTTTTAATTTCAAATATTTAAA
TTAAAATTGTCAGTATAAGTTTTTCTTTTAACGTATTCACCCATTCCAAAGTGATTCGAA
TCGAATTACAATGAATCCTATGACAAACGTGAAAAATGTATTGAAACTAAGTGAACGAGA
ATTGGGAAATAAGTCCAAAAGTTCTTGGCACGATCAGTACAGAGATAGTGCATGGATATT
TGTTGGTGGACTACCATATGATTTGACCGAAGGAGATGTTATTTGTGTTTTTTCTCAGTA
TGGTGAAATAGTAAATATCAACATGGTAAGGGATAAAGCAACAGGGAAACCAAAAGGATT
TGCTTTTTTGTGTTACGAAGATCAAAGATCTACAATTTTGGCAGTAGACAATCTCAATGG
TATCAAGATTCTTGGGCGCACTTTACGTGTTGATCATTGTGAACAATACAAGGTACCTAA
TGCCGACATGAGTAAAATTGATGAAGTCACAGCTACAATTAGAATGGAAGGATGTGCACC
AGTTGCACCTAAAGTTGAAACTGTAGTTGTTAAGCAGGTAACTGTAAAGGAAGGAAAAGT
TAAGAAAAAGAAGAGTAAAGTGAAAAAGAGTAAAAAGAAAAAGAAGAAATCAAAAAGCTC
TGATTCTGATTCTAGTGATTAAATTAGTTTGATAACTTATAATAATACTATTTAAGTTTT
CTATAAAATTAAACAATTATGAATAAAAAAA
(751 bp)

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