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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23490c6_g4_i4
Scaffold_id
NCBI non-redundant
(nr)		putative_s-syntaxin_[Danaus_plexippus]
Ontology
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0006810 P transport
GO:0006836 P neurotransmitter transport
GO:0006886 P intracellular protein transport
GO:0006887 P exocytosis
GO:0008021 C synaptic vesicle
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016081 P synaptic vesicle docking
GO:0016192 P vesicle-mediated transport
GO:0016324 C apical plasma membrane
GO:0030027 C lamellipodium
GO:0030141 C secretory granule
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0031175 P neuron projection development
GO:0031201 C SNARE complex
GO:0031629 P synaptic vesicle fusion to presynaptic active zone membrane
GO:0042470 C melanosome
GO:0042581 C specific granule
GO:0042582 C azurophil granule
GO:0043005 C neuron projection
GO:0045785 P positive regulation of cell adhesion
GO:0048278 P vesicle docking
GO:0050544 F arachidonic acid binding
GO:0050921 P positive regulation of chemotaxis
GO:0060291 P long-term synaptic potentiation
GO:0061025 P membrane fusion
GO:0070062 C extracellular exosome
GO:1903078 P positive regulation of protein localization to plasma membrane
GO:2000010 P positive regulation of protein localization to cell surface
Transcript
Level		FPKM:27.10 TPM:26.55
ORF EntryO_TrvaFAMAMG28296_3prime_partial:A_TrvaFAMAMG_TR23490c6_g4_i4
Sequence
(Nucleotide)
GTTGTCCACGAAGAGCGCGATGTTGTTGGAGTCCAGTAGACTCTCACACTCCTCCTCCGA
CACGGCGAGGTTCGTCAACTTGATCTGTTGTTGCAGTAACAACAGCTGGTTGTGTCGGAG
CGCGTCCAGCTCCCGGCGGTGCTCCTCCAGTGCGTCCGCGTACAGCCGCCTGGTGACGGC
GTACTGCAGCCGCGCGATCCTCCAGCCGACCGCCGCGCCCGCAGACCCCTCCGACACCCG
CGACTCGAACTGCCGCAGAGCGCCGCATATCTTCAGGCCCAGAGCGTTCGACTGTGTCAC
CAGGCTGTCCAGACGATCCTGTAACTGTTTGTTGGCGTGGTAGGCGGGGTCGGAGTATAT
GTGTCGGAGATGCGCCGTGTTGTCGCGCAGCTGACTGATCCACTCGCGCATGCGCTCCAC
CTCCTGGAACATGTGTTGTATGTGTGCGTCGAGCGACGAGGGCTGAGTGTCGAGCACGGT
GTCGCCGTACACCGCGACATCGCCGCCCGACATCGACACCGACACATGTCGCAGGTCGTG
CAGTCTGTCGCGCACGTGCATGTCGCGACACACGTCCACTCCGCTCCGCTGTCCGCGCCG
CACTGACACTCACTCACACTCGCCGACACTCGCCGACTGATAACACACCTTCACCACCAA
CACCATTAC
(669 bp)

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