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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23490c1_g4_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_25_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
Transcript
Level		FPKM:3.77 TPM:3.70
ORF EntryO_TrvaFAMAMG28270_complete:A_TrvaFAMAMG_TR23490c1_g4_i1
Sequence
(Nucleotide)
ACACACACACACACACGCGCACACATGTCGCATTCAACACGCAGGGAATCGGATCTCGTG
CTCTACGCTATTCTATACTACCTCCCTTCGTTGCCTTCGTCCTACGTTACAGTAATATTT
CGATACTAAATGACAACATTCACAGTTCCAACGCCACCACGACAATGTGGAACAATAAGT
TATTTCTAGACATGTGAATGACGTCATAAAGTATGTAGTTACGTGAGGAATACAGTTCCA
TCATGAAATCTATTAAATCAGAAACCTATTTAAGATTCTCTCTAACACAGAAATGTGATG
ATAAGTTTATATTTCAGGACAAATCAATCGCTTCTTTTAAATTGTCGTCAGTTTTTAGCA
AATTCTCAGTTCGTTCAATACAAAGCTATCTCCGGTCATTGAACTCGTTTATTTAGCTTG
ATTTTCGTAAAATTACGATGACTATAAGCTGTGTATAAGTTTGCCGCGCGCAGTTCAAAT
GTGAATTTACAAATCACTGACGTCAAGCTGAGTAGAACTCATGGGGGTTTGCCCGACATC
TTACCATTAAATTTCCGAATTAGGGAGAAACCGAAAACTCTTCTATACCTTTTAATTGCT
TCATTAAGTTTTGACTTCATTATTGCGTATTTATTATTTCATTTTCATCCAATTCCCTTG
TGATTTTCAATTTGCAATTATTTTTTTATTATTAGTTATTAGAATGACGATATTTTTTCA
CAACGGTATAATTTTCTACTCTCAACAGACAGTATAGTGGTTGCGGGTGTGTGCGTGACG
CGGCGACGGATCGCTCGCTCACTACTCACGAATATGAGCTCGCGACCGACGGAGCCTCAC
TACTACACGGATCAGTGTACAACATATCTGATGTCAAGTGATCAGTGGCGGCCAGACCAT
AGAAGCAAATATGCGTTGCATACTCTGTCATGTATAAATAGCAACATAAAGTCGATTAAA
TGGATATGTAATGAAAATTTGTAAACAATTAGGTCAAATCTATATTTCTTTATATCCTGA
ATTAAAATATACACGCCCGCCACTGGCAGTGATTGATGGTTGTTTATATAGGGTGCAAGT
AAATCCGTTTACTAGTGAATTCTCCCACAGTAGATAATATAACTATGTGTTATGGTGTGT
GTGGTGTGTATGTGTATTGTGACAGGTCAGTGTAGTACTCACCGCGTGGAGCGCCACGCT
CGTCCCCGCGCCGCCACCGCGCCACCTTCATACTCTCTCGGAACTTGCCGATCTCGCGGT
GTATGACGTCACGCTTCTCCTCCGAGATGTCCGCCTCCTCCAGCACGCGCGCCGTCTTGG
AGATCGCCTCCTCCTTCTGTATGATGTCGTAGTTGTTGATCTCGTCCTGGTACTCCGCGG
CGACCTGCTGCAGCCGGACGCGCGCCGCCTCGTCCAGCGCCTGCTGCCGCGCGTCCAGGT
AGCCGCCGCCGCCGCCGCCCGTCTCCAGCTTCGACCGCTGCTCCGTTTTATATGAGTCGA
CGAGTGCCTGCATCTTGCCATCAGTGCGAGCGAGCAGCCTCTTGTCTCCCAACTCCAGTT
CATTTAGCAGACGGACACAACGCAGCGCTGGCTCCGGACCTGCAAACTCGCAGAATCCGA
AAGTGGAGACTCTCTTCCATGTGAGCACCGTGCCGCACGCATTCAACATGGAGCGGATCA
TAGTGTCCGGAGCACGAGATGATATGTTACCAATGAAGACTGTGACAGGAGGTCCTTCGG
GTTCCTTGGCTCCGTTAGTGTTCCTTGTGGGTCCGCGAGCAATTACGGCCTTCCCCCCGG
CCTGCGGAGCCCCGGGCGCCGGCAGCAGCGCGCCGCGACCTCCTGCGCTCGACGCGCCAT
ACGCACCTACCATCACGTGAGTCGGCATCGACATGGTGACGACACCCGGAGCGATCCCGT
ACGGCACCAGCGGCGGCCGCGGCGGGAACGACATCACACCGCACACTTTACACAACACTC
GAAACCACAACGTCAATGCTTTACACAACACTCTTCCAATCTTTCACGTCTACTTTAATA
CAATCAATCACTCCAACTTCAGTTATTAGAAAAATTACTTATCGATCACAAGTATTTTAA
TTTATAACACACGTTTAACGTTCAAATAAATTAAAAAATCTAGTCCGTAGAAACGCCATG
ATAAAAATTCACGAAAGTCGCCATCTTTACAAACTTTTTTGACATTGACATTCATTTCTG
CTTGCTTTTG
(2230 bp)

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