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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23490c1_g2_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_25_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
Transcript
Level		FPKM:8.05 TPM:7.88
ORF EntryO_TrvaFAMAMG28265_complete:A_TrvaFAMAMG_TR23490c1_g2_i2
Sequence
(Nucleotide)
ACACACACACACACACGCGCACACATGTCGCATTCAACACGCAGGGAATCGGATCTCGTG
CTCTACGCTATTCTATACTACCTCCCTTCGTTGCCTTCGTCCTACGTTACAGTAATATTT
CGATACTAAATGACAACATTCACAGTTCCAACGCCACCACGACAATGTGGAACAATAAGT
TATTTCTAGACATGTGAATGACGTCATAAAGTATGTAGTTACGTGAGGAATACAGTTCCA
TCATGAAATCTATTAAATCAGAAACCTATTTAAGATTCTCTCTAACACAGAAATGTGATG
ATAAGTTTATATTTCAGGACAAATCAATCGCTTCTTTTAAATTGTCGTCAGTTTTTAGCA
AATTCTCAGTTCGTTCAATACAAAGCTATCTCCGGTCATTGAACTCGTTTATTTAGCTTG
ATTTTCGTAAAATTACGATGACTATAAGCTGTGTATAAGTTTGCCGCGCGCAGTTCAAAT
GTGAATTTACAAATCACTGACGTCAAGCTGAGTAGAACTCATGGGGGTTTGCCCGACATC
TTACCATTAAATTTCCGAATTAGGGAGAAACCGAAAACTCTTCTATACCTTTTAATTGCT
TCATTAAGTTTTGACTTCATTATTGCGTATTTATTATTTCATTTTCATCCAATTCCCTTG
TGATTTTCAATTTGCAATTATTTTTTTATTATTAGTTATTAGAATGACGATATTTTTTCA
CAACGGTATAATTTTCTACTCTCAACAGACAGTATAGTGGTTGCGGGTGTGTGCGTGACG
CGGCGACGGATCGCTCGCTCACTACTCACGAATATGAGCTCGCGACCGACGGAGCCTCAC
TACTACACGGATCAGTGTACAACATATCTGATGTCAAGTGATCAGTGGCGGCCAGACCAT
AGAAGCAAATATGCGTTGCATACTCTGTCATGTATAAATAGCAACATAAAGTCGATTAAA
TGGATATGTAATGAAAATTTGTAAACAATTAGGTCAAATCTATATTTCTTTATATCCTGA
ATTAAAATATACACGCCCGCCACTGGCAGTGATTGATGGTTGTTTATATAGGGTGCAAGT
AAATCCGTTTACTAGTGAATTCTCCCACAGTAGATAATATAACTATGTGTTATGGTGTGT
GTGGTGTGTATGTGTATTGTGACAGGTCAGTGTAGTACTCACCGCGTGGAGCGCCACGCT
CGTCCCCGCGCCGCCACCGCGCCACCTGCCGGCCGCACACGTCAGCGCACGCACACACCC
GCGCGCCCCACGCACACGCGCACGCACTCACACACGCACGCACACGCGCACGCACTCGCG
CACGCACACGCACACTCACACACGCACTCTCTGACGCACCAACAACAGCGCCGACGCTAC
GCCACGACTTGAACAAACTATCTGTTCTTTTAAATATGTTTCTATTATTAACCAGTTTGT
TCCCCAAAATTCGACACTTACTAAGAACATATTTCTTTACCTTTCTACATTTAATGAAGA
ATTACTTTATAATATTCTGGATATCTGTACTCTAACTCCGAACTAAATCACATTACTGAT
CTAAAGCATATTATAAGTGAAACCATAGAGTTGTCCATTGCAATCATTTTTTATCAAATT
TACCAGTGCGATTGGAAGTATGGATAATACTCTATCGGAAAACATAATAAAAAAGCAACA
GTTAAATAAGTAGCGCAGCACTGTTGTACACATTATAACGAGAGGTGCGACAGTACATTC
TCACTGCGGGGCGGGGTGTGCTTGTGTGTCTCGAAGGGGGGATGGGGGGAGTGCCGGGAG
CGGGGGAGGGAAGAGGGACGGGAGAGGGGTAGACGGGCGCTAGAGGTTACTGACCTTCAT
ACTCTCTCGGAACTTGCCGATCTCGCGGTGTATGACGTCACGCTTCTCCTCCGAGATGTC
CGCCTCCTCCAGCACGCGCGCCGTCTTGGAGATCGCCTCCTCCTTCTGTATGATGTCGTA
GTTGTTGATCTCGTCCTGGTACTCCGCGGCGACCTGCTGCAGCCGGACGCGCGCCGCCTC
GTCCAGCGCCTGCTGCCGCGCGTCCAGGTAGCCGCCGCCGCCGCCGCCCGTCTCCAGCTT
CGACCGCTGCTCCGTTTTATATGAGTCGACGAGTGCCTGCATCTTGCCATCAGTGCGAGC
GAGCAGCCTCTTGTCTCCCAACTCCAGTTCATTTAGCAGACGGACACAACGCAGCGCTGG
CTCCGGACCTGCAAACTCGCAGAATCCGAAAGTGGAGACTCTCTTCCATGTGAGCACCGT
GCCGCACGCATTCAACATGGAGCGGATCATAGTGTCCGGAGCACGAGATGATATGTTACC
AATGAAGACTGTGACAGGAGGTCCTTCGGGTTCCTTGGCTCCGTTAGTGTTCCTTGTGGG
TCCGCGAGCAATTACGGCCTTCCCCCCGGCCTGCGGAGCCCCGGGCGCCGGCAGCAGCGC
GCCGCGACCTCCTGCGCTCGACGCGCCATACGCACCTACCATCACGTGAGTCGGCATCGA
CATGGTGACGACACCCGGAGCGATCCCGTACGGCACCAGCGGCGGCCGCGGCGGGAACGA
CATCACACCGCACACTTTACACAACACTCGAAACCACAACGTCAATGCTTTACACAACAC
TCTTCCAATCTTTCACGTCTACTTTAATACAATCAATCACTCCAACTTCAGTTATTAGAA
AAATTACTTATCGATCACAAGTATTTTAATTTATAACACACGTTTAACGTTCAAATAAAT
TAAAAAATCTAGTCCGTAGAAACGCCATGATAAAAATTCACGAAAGTCGCCATCTTTACA
AACTTTTTTGACATTGACATTCATTTCTGCTTGCTTTTG
(2859 bp)

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