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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23490c1_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA-binding_protein_25_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0042981 P regulation of apoptotic process
GO:0044822 F RNA binding
Transcript
Level		FPKM:10.88 TPM:10.66
ORF EntryO_TrvaFAMAMG28259_3prime_partial:A_TrvaFAMAMG_TR23490c1_g1_i1
Sequence
(Nucleotide)
GCGGGGGCGGGGGCGGGGACGGGGGTGGGCGGCGGCGCGTACAGCAGCTGGTGCTGGTTG
AGCGCGCGCGTGTAGTTGTCGCGCGCGGCCTGCTCGTCGGTGGCTCGCTCGCGGCGGTAC
TGTTCCCGCAGCGCGTCCAGCTCGTCCTGCTCGCGGCGTCGCTCGCGCGCGTCCGCCTCC
GCCTCGCGCACCCGCCCCGACAGGCGACGCTGCAGCTCCTTGCCTTTGTAATATTTGTGA
TCGTCTCTCTCGTCGTCGTAGTCCTCGAGGAACTCCTTGAGTCGCTTGGCCTCTCGCTCG
CGCTCATCGTCTCTCGCTCGCTCCCGCTCCCGCTCCTTCTCGTACTCTTTGGCCTTGCGT
CTCTCGCGTCCCTCCCAGTTGCGTAACCTCTCCTGGTAGGCGGCCTCCTTCTCCTTAGCC
TTCTTCTCTATCCGCTTCCTGTCCCGCGCCTCCTCCTCGAGCTCCTTGTCTCTGCGCGCG
TCGAGCTCCCCCCTCCCCCGCGACCGCGACCTCTCCCTGTCCCGCTCTCTCTCCCGCTCG
CGCTCTCGCTCTCTTTCTCTCTCTCGCTCACGTTCGCGTTCACGTTCGCGCTCTCTTTCT
CTGTCTCTCTCCCTCTCCCGCTCTCGTTCCCTCTCTCGTTGTTCACGCTCTCGTTCCCGC
TCACGTATTTCTCTTTCTCGTTCTCGTTCTCTCTCCCTCTCCCTCTCTCGTTCTCTGTCT
CGCTCTCTCTCGTCTCGTTCTCGTTCTCTGTCCTTGTCGCGATCGTCACGACGATCTTTA
TTCCTGGAGAGACTCCTCCTGCGCCGGTCCCTGTCCCCCCTGTCCCTGTCCTTGTCTCTC
TCCTTCGTGCTATCTCTCTCTCTCTCCCTCTCCCTCTCCCTCTCCTTGGTGCTGTCCTTG
TCCTTCTCCTTGTCTTTCTCCTTCTCGTCCTTAGGTTTCCTCCTGCCAATCACTTCAGCC
TCCTCCTTCATACTCTCTCGGAACTTGCCGATCTCGCGGTGTATGACGTCACGCTTCTCC
TCCGAGATGTCCGCCTCCTCCAGCACGCGCGCCGTCTTGGAGATCGCCTCCTCCTTCTGT
ATGATGTCGTAGTTGTTGATCTCGTCCTGGTACTCCGCGGCGACCTGCTGCAGCCGGACG
CGCGCCGCCTCGTCCAGCGCCTGCTGCCGCGCGTCCAGGTAGCCGCCGCCGCCGCCGCCC
GTCTCCAGCTTCGACCGCTGCTCCGTTTTATATGAGTCGACGAGTGCCTGCATCTTGCCA
TCAGTGCGAGCGAGCAGCCTCTTGTCTCCCAACTCCAGTTCATTTAGCAGACGGACACAA
CGCAGCGCTGGCTCCGGACCTGCAAACTCGCAGAATCCGAAAGTGGAGACTCTCTTCCAT
GTGAGCACCGTGCCGCACGCATTCAACATGGAGCGGATCATAGTGTCCGGAGCACGAGAT
GATATGTTACCAATGAAGACTGTGACAGGAGGTCCTTCGGGTTCCTTGGCTCCGTTAGTG
TTCCTTGTGGGTCCGCGAGCAATTACGGCCTTCCCCCCGGCCTGCGGAGCCCCGGGCGCC
GGCAGCAGCGCGCCGCGACCTCCTGCGCTCGACGCGCCATACGCACCTACCATCACGTGA
GTCGGCATCGACATGGTGACGACACCCGGAGCGATCCCGTACGGCACCAGCGGCGGCCGC
GGCGGGAACGACATCACACCGCACACTTTACACAACACTCGAAACCACAACGTCAATGCT
TTACACAACACTCTTCCAATCTTTCACGTCTACTTTAATACAATCAATCACTCCAACTTC
AGTTATTAGAAAAATTACTTATCGATCACAAGTATTTTAATTTATAACACACGTTTAACG
TTCAAATAAATTAAAAAATCTAGTCCGTAGAAACGCCATGATAAAAATTCACGAAAGTCG
CCATCTTTACAAACTTTTTTGACATTGACATTCATTTCTGCTTGCTTTTG
(1970 bp)

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