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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23489c0_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_ankyrin-2-like_[Bombyx_mori]
Ontology
GO:0002027 P regulation of heart rate
GO:0003283 P atrial septum development
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0006874 P cellular calcium ion homeostasis
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0007165 P signal transduction
GO:0007399 P nervous system development
GO:0008093 F cytoskeletal anchor activity
GO:0010628 P positive regulation of gene expression
GO:0010881 P regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion
GO:0010882 P regulation of cardiac muscle contraction by calcium ion signaling
GO:0014704 C intercalated disc
GO:0016020 C membrane
GO:0016323 C basolateral plasma membrane
GO:0016324 C apical plasma membrane
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0030018 C Z disc
GO:0030054 C cell junction
GO:0030315 C T-tubule
GO:0030507 F spectrin binding
GO:0030674 F protein-macromolecule adaptor activity
GO:0030913 P paranodal junction assembly
GO:0031430 C M band
GO:0031647 P regulation of protein stability
GO:0031672 C A band
GO:0033292 P T-tubule organization
GO:0033365 P protein localization to organelle
GO:0034394 P protein localization to cell surface
GO:0034613 P cellular protein localization
GO:0036309 P protein localization to M-band
GO:0036371 P protein localization to T-tubule
GO:0042383 C sarcolemma
GO:0043005 C neuron projection
GO:0043034 C costamere
GO:0043268 P positive regulation of potassium ion transport
GO:0044325 F transmembrane transporter binding
GO:0045121 C membrane raft
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
GO:0050821 P protein stabilization
GO:0051117 F ATPase binding
GO:0051279 P regulation of release of sequestered calcium ion into cytosol
GO:0051597 P response to methylmercury
GO:0051924 P regulation of calcium ion transport
GO:0051928 P positive regulation of calcium ion transport
GO:0055117 P regulation of cardiac muscle contraction
GO:0060307 P regulation of ventricular cardiac muscle cell membrane repolarization
GO:0070296 P sarcoplasmic reticulum calcium ion transport
GO:0070972 P protein localization to endoplasmic reticulum
GO:0072659 P protein localization to plasma membrane
GO:0072661 P protein localization to plasma membrane
GO:0086004 P regulation of cardiac muscle cell contraction
GO:0086005 P ventricular cardiac muscle cell action potential
GO:0086014 P atrial cardiac muscle cell action potential
GO:0086015 P SA node cell action potential
GO:0086046 P membrane depolarization during SA node cell action potential
GO:0086066 P atrial cardiac muscle cell to AV node cell communication
GO:0086070 P SA node cell to atrial cardiac muscle cell communication
GO:0086091 P regulation of heart rate by cardiac conduction
GO:0098907 P regulation of SA node cell action potential
GO:0098910 P regulation of atrial cardiac muscle cell action potential
GO:1901018 P positive regulation of potassium ion transmembrane transporter activity
GO:1901019 P regulation of calcium ion transmembrane transporter activity
GO:1901021 P positive regulation of calcium ion transmembrane transporter activity
GO:2001259 P positive regulation of cation channel activity
Transcript
Level		FPKM:0.86 TPM:0.84
ORF EntryO_TrvaFAMAMG28244_3prime_partial:A_TrvaFAMAMG_TR23489c0_g1_i2
Sequence
(Nucleotide)
CTACACCCTTGTGGTGAGCTAAACGCAACAACTAGTCTAAAATTGTGTATTTTCCACAGA
AAAATACAGTAAAAATAAAAACGCGTTATCGCAGTTTGGTGTAATAGCGGTGCTGAAATA
ACATACAAATAAATCGCTAGACAACCTTTTTTGCAATTTAAAATGGCGGATCGCGAATTG
TGACTTCGGAAATACCAGTCCGATTCGAAAATCGAATTCGTAATTTCGTTTATCTTCCGC
GGAAAATGTTGGTGAGAACTTACTTCTCTGTGTAAGGTACAGTGCGCGAGTTTCCCGGAA
AAAATCGATACCGTGTGATGCCGACAGCCTAGGTCTATTATTAAACTGTCTCGGCTAACA
GACTGTTGTTCATGTCAGAAGAAAAAGAGGAGTAGTTTAGCCTCGATCGAAGAGATGACG
ACGGAGAACGCGACGCCTGGCCAGGCGGACGCCAGCACCGCGTTCTTGCGTGCTGCCCGG
GCTGGCAACATCGAGAAGATCATTAGTCTTCTCGAACAGGGCGTTGATATCAACGTCAGC
AATGCGAACGGCCTGAACGCTATCCATCTCGCATCCAAAGATGGACATGTAGAAGTCGTG
AGGGTGTTACTGGATAGAGGAGCTTCAATAGATGCTGCTACCAAGAAGGGCAACACTGCT
CTTCACATCGCTTCCTTGGCTGGACAAGCTCAGGTTGTTGAGTTGTTAGTCCAGAATGGA
GCTCAGGTCAACATCCAATCGCAAAATGGTTTCACCCCACTATACATGGCAGCTCAAGAG
AACCATGACACTGTTGTTAAATTTCTTCTTGCTAACGGCGCTAACCAAAGTCTTGCCACT
GAGGATGGTTTCACACCTCTGGCAGTGGCTATGCAGCAAGGACATGAGAAAGTAGTGGCA
GTGCTTTTAGAAGCAGACACGCGCGGCAAGGTTCGATTGCCAGCTCTACACATCGCCGCA
AAGAAAGATGACGTTAAAGCTGCTAATTTGCTTTTAGAGAATGAACACAACCCAGACGTG
ACATCCAAATCTGGATTCACGCCTCTGCACATCGCAGCGCATTACGGCAACGAGGCAGTT
GCCAGATTATTGTTAGCTAAAGGAGCAGATGTGAACTGCGCTGCTAAACACAATATATGC
CCGCTACATGTTGCTGCTAAATGGGGTAAAGACAACATGGTAGCTCTCCTATGTGACAAC
GGTGCAAATGTGGAGGCCCGTACCAGAGATGGTCTGACCCCTCTCCATTGCGCAGCCAGA
TCTGGACACGAGAGAGTCGTCGAAGCTCTCCTTGATAGAGGCGCTCCTATAACCAGTAAG
AGCAAGAATGGTCTAGCCCCCCTACACATGTCAGCTCAAGGAGAACATGCAGAAGCTGCA
AGAGTGCTATTGTCCCGACGAGCTCCAGTTGATGACGTCACAGTTGACTACCTAACAGCT
CTTCACGTGGCTGCCCATTGTGGACATGCTAAAGTAGCGAAACTACTTCTGGATAGAAAC
GCGGACGCGAATGCCCGAGCGCTGAATGGCTTCACTCCCCTACACATCGCCTGCAAGAAG
AACAGGATCAAGGTCGTCGAGTTGCTTCTTAAATATGGCGCGAGTATCCAAGCAACAACA
GAGTCAGGTCTGACCCCTCTCCACGTGGCCGCGTTCATGGGCTGCATGAACATCGTGATA
TACCTCTTGCAGCATGAGGCCAACCCTGACGTACCGACTGTCAGGGGAGAAACTCCTTTA
CATCTGGCTGCTAGAGCTAACCAGACGGACATAATCCGCATTCTTCTCCGCAACGGAGCA
GCAGTGGAAGCCAAAGCAAGAGAAAGACAAACCCCTCTTCACATAGCCTCCAGACTTGGC
AACGTCGACATCGCAGTACTATTGCTGCAACATGGTGCTGACGTCAGAGCAATTACTGCT
GACCATTACAATCCGCTGCACATTGCTGCCAAACAGCAGAATCATCAGGCTAATGATGTG
GCAGCAGCTTTGATTGAACATAATGCACCTCTTACAGCTACTACCAAGAAAGGATTCACT
GCTCTTCATCTTGCTGCTAAATACGGAAACCTCAAGGTGGCAAATCTCTTACTGGCTCAT
GGAGCAGCCCCAGATCAAGCTGGTAAAAATGGTATGACTCCACTACACATCGCAGCACAA
TATGACAAACAAGCTGTTGCTACAACACTACTGGAAAAAGGAGCAGATGCTAAGGCTGTA
GCCAAGAATGGACACACTCCACTTCACATCGCAGCTCGTAAGAATCAGATGGAAACAGCT
GCTACTCTTCTAGAATATGGAGCTTTAACCAACGCTGAATCAAAGGCTGGATTCACTCCA
TTGCATTTGGCCGCTCAGCAGGGTCACACAGAAATGTGCGCATTGCTTCTTGAGCACGGT
GCAGAACCAGAACATCAGTCTAAGAATGGACTCGCAGCCTTACACCTGGCAGCTCAAGAA
GACAAAGTACCCGTAGCACAATTACTAGTCAAGCATGGGGCAGAGGTGGATATATGCACT
AAGGGTGGTTACACCCCGCTTCACGTTGCCAGTCACTACGGACAACCAAATATGGTTCGA
TATCTACTCGAAAATGGAGCTTCAGTTAAAGCCCAAACTACTCATGGTTACACAGCGTTG
CATCACGCAGCTCAACAAGGTCATATCAATATCGTGAACATTCTACTTGAACATAAAGCG
GATGCCAATGCAACTACTACAAATGGACAAACCCCATTGGACATTGCTTCCAAGTTGGGT
TACGTGACAGTGATGGAGACTCTGAAGGAAATCTCGGAGCCTTCATCAGCACCAGCTTCT
CAGGAGAAGTACAAGGTGGTCGCTCCTGAGACCATGCTTGAAACTTTCATGTCGGATTCG
GAAGAAGAAGGTGAAGATATTATCCTGAATGACCAGCCATACAGGTACTTAACAGCTGAT
GACATGAAATCTCTGGGTGATGATTCCTTGCCTATTGACGTCACTAAGGACGAGAGAACA
GAATCCGCATTGAGCCATAAGAATATCATGGAGATTTCTCAAGGATCAATGAATGGTATG
CCGTATCAGCCTCAGCAGGAAGTCGTAGTGAAGAGCATCAGCCGGTACAGCACTGCTCAG
GCTCCAGAGGCATATTGCTACAATGTTGACCCATCACTACCCAAGAAGAAATTACAATGG
AAGAATTTCCTAGTTTCATTCCTGGTGGACGCCCGTGGGGGTGCGATGCGTGGATGTCGA
GGTGGTGGAGTGAGGGTCATAGTTCCTCCATTGTCTGCTCAACAACCTACAAGGATTACT
TGCAGATATTTGAAACCATCTCGCATCAACCACATGCCACCTCTGATGGAAGGAGAGGCT
CTCGCTTCAAGAGTATTGGAGATGGGACCTGTTTCAGCTAAATTCCTGGGACCAGTAATT
CTCGAAGTGCCTCATTATGCATCACTCCGAGGCAAAGAGCGTGAGATAGTGATCCTTCGT
TCAGACAACGGAACCAGCTGGAGGGAACACAACGCTGATGCAACTGATGATGTGGTTCAG
GATATACTCCATGAGACCTTAGAGATTGAAGATGCAAACGAAGACGAAAAAGGTTGGGAT
GCACCGCGTCTCACTAGAATCCTTACTCACGACTTCCCGCAGTACTTCGCTGTTATATCT
CGCATTCGACAGGAAGTACACGCTATTGGGCCTGAAGGTGGAATGGTATCAAGCTCAGTG
GTACCTCAAGTTCAAGCCGTGTTCCCTCAAGGAGCATTGACAAAGAAGATCAAAGTGGGC
CTCCAGGCTCAGATTATTGACTCAGAGTTGACTGCTAAACTCCTGGGTCGAGGAGTGGCA
GTATCACCCGTGGTAACTGTTGAACCACGACGAAGGAAATTCCATAAGGCGATCACGCTG
AGCATGCCAGCGCCCAGGCCTCACACCCAGGGCATGACGAACCAATACAGCACGTCATCT
GCCCCAACCTTAAGACTCCTCTGCTCCATATCAGGAGGAACCAACAGAGCTCACTGGGAA
GATGTTACTGAGAACACGCCTTTGACGTTCGTGAATGACTGTGTCTCGTTCACTACTACG
GTTTCGGCTAGATATTGGTTAATTGATTGTAGACACATAGAAGATGCTACGAAAATGGCT
ACAGAGTTGTACAGGGAAG
(4159 bp)

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