SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23477c0_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_midasin_isoform_X1_[Bombyx_mori]
Ontology
GO:0000027 P ribosomal large subunit assembly
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006461 P protein-containing complex assembly
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045111 C intermediate filament cytoskeleton
GO:0051082 F unfolded protein binding
Transcript
Level		FPKM:1.22 TPM:1.19
ORF EntryO_TrvaFAMAMG28064_5prime_partial:A_TrvaFAMAMG_TR23477c0_g1_i1
Sequence
(Nucleotide)
GCAATTCATAATACAGAAAGACTTTCGGATAATTTACCTTTACTTTCTTATTATGTTCAC
GAATATACAACATCTAAAAATGAGAATGACTGTCGTCGTATATCATACGCATATGAGTCT
ATTTCACTTGAAGAGAGAGCCGAATACTCGGCGCATTTAGAAACTCTGTTAAATGTTATT
TGGAAGAATATGGGAACCTTACATGTGACTTCTAGTTCAAAAACGAAAACAAATATAAAA
TTTGAATCACAGAAGTTCGATAACCTCATGATGTACTTGAGAAGAATTTACTATCATGAT
AAGACAAAAGCAGATGACCAAGACACATCAGATGAAGAACTTATACAACTTACCGTAAAA
GATAAAACGCTTGCAACTATGCTAACAAAGGCTTTAAGTATTAGAAACAAAATGGACAAA
TTTACGGAAATCGAACCGACAGTGGTCGTCAAGAACACATTAACTGCACAACTATCTTTG
TTGACAAGCCTTTCATTTATGCAGATAATGACTGAAGTACACCCCGTAGACCATGTAGAA
ATATACAGTCTCAAATCGAGATATATAGAAGAAGATATAAAGATGTTTGAAAGCCTGCTT
AGCGTTTATTACTATCAGGGTTTAGTTAGTGGTACCATCACTAGTTCAAGTGACATTAAA
AAGCCTTCTGCAGTCCCAACGGAACACTTGAATGACTTAGAAATCAGAAAGAATTTAGTA
AAGGTGCACCCTTTCTGTGAAGAAATATTGAAATTAAGAAAAGAAACTGCAGATCGTGTA
CAGAAATATGCTTTGGGTAACACTTACAGACCAGAAACGCCGTCTTACAGTAATTTTGTG
AAGGACTGCAGACATTGCTTTAAAACTTTATTGTCAACGAAAATTGTAAACAATGTTATT
ACGAGTTTGATTACAACATCTAATGATTTACAAATTAGATTAGAAAAAGAAGAGGAATTC
AAACTAGGACACAATATTCCTGATTTATCACAATGTTTACAAAATGCAAACAGTATAATA
AAAAAAACTACATCATGGTTGTATTCAGCAAACGCATTTTACAAGAAAATAGAAGAATCT
TATTCGGATGCTTTCCCTGATTTGGCTAAGCCATTACAAGACTCTATTTCTCAGACTATC
TACAGCGTGACAATGCTAAACGATCTTATAAAACAATTTAGTTCTAAACTTGACAAATAC
TGGCGTGTGTCAAATCTGATCGTGTATCCTTATTCAGTCACAGAAACGAACGAACAATTG
GAACGTTTCAAATATTTGAGAAGTAATTTACCGGAGCTTCCGGAGTCTTACGATATTTTA
CCACTGAAAATGTATTTAGCTAACTTAAGAATGTACTGTGTCGCATCCGAGAAGGTTGAT
GAGAATTCTAGTTGGGTTATGGTGAACACACTGAGTACGCTATCTTCCGAGTGGGAACAA
CAAGAAAGGGACTTGGAAAAGAAAAAACAAGACGATGAAGCTTTATATGTTACTAAATCC
AAATGTGAAGATGAAGACGAGAACGCTATAGCACAACAGGAGATACAAGATATGTTCCCT
TCTTATGCTGACGACGATTTCTCTGAATTCAAACCTCCTTCTCTCGAACAAAAACCCGTA
AAACGTTCACAAAACACTGACAACAAACAAAAACCACTAATTACCCCCGAAGATATGTCG
TTCGTTTACAAATGGCATTCGAACTTTGTACGTGAAATGACCGAAGCGGAGTGGTTACCC
AGCCGAAAGAAGTTGGTCGGAAATGACGTCTCGACTGTTTTCTTTGAAACATATCCGTTA
GTTAGTAGTATAATACGGGACGCTTATTATTCTCTGGATATGGATTTCGATGGAGCAGTA
GCACCCGGGCTGATGGTAATTATATCGCAAATCAAACAGAAGGTCGACGGACAAGAATTA
TCATCGGGAAAAGCTGACTTCTATAGATCGCCGTGGGTATCCGAGACGAAGCAATGCGTG
CCGTTGCTTCACAAAGTAAAGGAGAGCACAAACGAATTATTAGACCAGTGGCCAGATTTC
CCGACTTTGAAGGAGATAATAGTAATAGTAAATAGGATTTTTAGTTTCCCTCTAACAAGT
CCAATATCCCGATTTTTGACTGGTCTCGAATTGCTTCGTGATAAAATTGAAGAATGGAAT
AAAAATGCTCATAAAGGCAATAATTTGATCGACATATCGCTTTCCATTGGACAACAAATT
ATCAACTGGAGGAAACTTGAAATGAGTCATTGGAAAGAATGTCTCAACAACCTTTATCAA
AGGAAACAAGCCGAAACCCACAAATACTGGTTTCATTTATTTTCTATAATCAAGCCATAC
CTATATGATGATGAAAGTACAACTGTAGACCCTGCAAGATTAATATCAGTTCTAAGAGAT
TTTATGGAGAAGTCAAATCTGGCAGAATATGAAGTTAGACTAGACTTATTATTCGTCTAT
CATTGTCTTTTAGTTCATAAAAAATCAGATCCAAAACGAGATGAACTCCTTTCAATTTTA
TGGAATATGCATAATTACTACGCTCAGTTTAGCGGTCAAGTGGCTGCTTGTATCAAAGAC
AAACGAGCTCCAATCGAGAAGAAACTACGTGATTTCGTTAAGATCTGTAGTTGGGATCGC
GATCTCAGTTACTGGAGCGTCAAAGACACGGTCGAGAAGGCGCACAAAGCTTTACACAAA
CACACTAAGGAATTTGAAAAAGTGCTAAACGAGAGCGTTATAAGCTGCCTCGTGGACAGC
AGTTCTGACGTCACGAGTGACCACGTGGGTATATGGGACAGACCCAAGCGCGCAACTACG
GCTGCCCCGACGGGAGGCGCCTACATGATCGACCCGCAGTTATATATCGTTTCAGCAAGA
AACGTTAAGAAGTACATAGATCAAGCTGAAGAACCGTCTAAAGTTGTACCAGAGGGAAGT
TTACTCGCTAAAACGACAAGTTTACTGAACAAAGCGAAGACTCTTTGCAAAGATACGATC
GCTAACACTGGATACCCATCGTTGGTGCAAGCCTTAGACGATTTCGTGACAACTATCATC
GAAACAAACACACACTTGGGATCTTTAGAAGTCGACACATCCCTTCCAAAAGACAAGCAA
AAGTCTCAAGCTAAAAACATTATCCAACAAAAGCGGAAAGCCCTGGCGGATCTGTTTAAG
TACCTCGCAAAGTTAGGTCTTAATTATCGAACCGGCCTCGTTATATTGTCGGCGTCAGAT
CAATTGTACGATTTTACTATACCGCCCGTAGATTTGGATGCGGCTATGGGATACTTGAAG
AGCAGGCGTTGTGACGCGTCGTTGTCATTGCTGTGGTCCGGTTGCGAGAAATACTTCCAA
AAGAACATAGCTCGACATCAGTTCTTGACAGCTGCTTTGTTGTCTCCACACGAAGATTTG
GGAATGCAAAATATAGAGAGAATTAAAGGATTTGCCGCTCAGTTATTGAAATTAACAAAT
ACTCAAAAGAAGTCAATATCGAAATATTCACGTTTACTATGTGATTTACGTACCGTTGCA
ACAAATCTTACAAGTGCTGTTGATATTGACGTAACCAATACTCTTTATCAACGTCATTTA
TTAACACGTCTAAAAGACCAATTAAATATTATTTTAGAATGCTATTCGAATAGTAGTATA
TCGTTGGAACAGTTTTATTTAGTTTTAAAATCTTGTCCAGAAAAAACTTTAAGAGGAGAA
CAGGAACCAGAATTCGATTCAGTTATTGCAGATTCTAAAATAGTAAAATGCTTCAAACAT
TCTGATGAATGGAATGAACTTAGCAAGAAAATAAAAACTTTAATAACTAAAGTCAATAAT
CAAAAAGCTATGCTGCTGAAATTATCAACCACATTACCCAAAAAAATAGGACAAAGTACA
GAACATCCACTAATTTCACAAACTCTTATAGACGCCATTAAGGAAAGTGACGAAAGCCTA
AGTGATATGATTCATGAAATTAATTCTATTCTGAATGATCACCAACTTTTATTAAAACTG
GATATCGATGGTTTTGTATGGGAACACCCTGTTTTAAGAAGCTTACGAGACTTGGTGTCT
TATTTGAGCAAAAAGCAGGATAAAATCTGCGAGTATGATGACATGGATAATTACGGGAAG
ACTACAGAAAATGTTTCAACAGAAATGTTTATAAATCAAACCGAAGATCTCATCGCAACA
ATGCTTTTGATCATCCAATCAGTATACAAGAAACATTTAACAAGTAATTTATCTGAGAGC
ACCGAAGTTATTAACGCTATTGACGAGTTCATAGACAATGATAAAAAAGAAGAGACAAAA
GATATAGTCGAAGATAAACATTTGAAAGAACTCTTACAAGATAAATTATCAGATGACTCT
AAAATGCTCCAATTGGAAACATTAATCAGTAAAGCTTCCAGCCTATTGAATAATTATGTT
AATTCTTTAAGTGAAGCGAACATAGAAGAAATGAAGCCTATTTTGATGCGATCTCTACCT
ATATTGGAACAAACAATGCATTTCGTACAATATTTTGTAACACAAAAAGTTTCAGTACAC
AGAGTATCTTGTAAAATGTTATCAGTGCTATTGAAAATATTTTCAGATTTGTCGTCTAAA
GGATTTTGCAAACCGTCTGATTTGGAAATGGACGAGGGTGAAGGCGAGGGCGGGCCGGGG
AAGCTCACAGGAGGCGTTGGATTGGGAGAAGGAGAAGGACAGAAAGATATCTCAGAACAA
ATAGAGAATCAGGACCAATTAGACGACGCTCAACGTCCCGGCGAAGAGAAGAAAGAAGAA
GATAGAGATTGTAAAGAGGAAGAGAAAGGAGTTAATATGACAGATGACTTCGATTCTCAC
TTACAAGACGTTGATAAAAAAAGACAATGATTCTGATCAAGAAGATGATGATAATGACGC
TGATAAACAAATGGGGGACACCGACAATGCAGCTGAAAAGTTAGACCAACAAATCTGGGG
TTCGGAACACGAAGAAGACGTAGAAGATGAAGGAAAGAAAGATAAAGATGA
(5031 bp)

- SilkBase 1999-2023 -