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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23476c7_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_neurofibromin_isoform_X2_[Papilio_polytes]
Ontology
GO:0000165 P MAPK cascade
GO:0001649 P osteoblast differentiation
GO:0001656 P metanephros development
GO:0001666 P response to hypoxia
GO:0001889 P liver development
GO:0001952 P regulation of cell-matrix adhesion
GO:0005096 F GTPase activator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0007154 P cell communication
GO:0007165 P signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007406 P negative regulation of neuroblast proliferation
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007507 P heart development
GO:0008017 F microtubule binding
GO:0008289 F lipid binding
GO:0008429 F phosphatidylethanolamine binding
GO:0008542 P visual learning
GO:0014044 P Schwann cell development
GO:0014065 P phosphatidylinositol 3-kinase signaling
GO:0014069 C postsynaptic density
GO:0016020 C membrane
GO:0021510 P spinal cord development
GO:0021897 P forebrain astrocyte development
GO:0021987 P cerebral cortex development
GO:0022011 P myelination in peripheral nervous system
GO:0030036 P actin cytoskeleton organization
GO:0030198 P extracellular matrix organization
GO:0030199 P collagen fibril organization
GO:0030325 P adrenal gland development
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031210 F phosphatidylcholine binding
GO:0031235 C intrinsic component of the cytoplasmic side of the plasma membrane
GO:0042060 P wound healing
GO:0042992 P obsolete negative regulation of transcription factor import into nucleus
GO:0043005 C neuron projection
GO:0043065 P positive regulation of apoptotic process
GO:0043087 P regulation of GTPase activity
GO:0043234 C protein-containing complex
GO:0043407 P negative regulation of MAP kinase activity
GO:0043409 P negative regulation of MAPK cascade
GO:0043473 P pigmentation
GO:0043525 P positive regulation of neuron apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0045124 P regulation of bone resorption
GO:0045545 F syndecan binding
GO:0045664 P regulation of neuron differentiation
GO:0045685 P regulation of glial cell differentiation
GO:0045762 P positive regulation of adenylate cyclase activity
GO:0045765 P regulation of angiogenesis
GO:0046580 P negative regulation of Ras protein signal transduction
GO:0048147 P negative regulation of fibroblast proliferation
GO:0048485 P sympathetic nervous system development
GO:0048593 P camera-type eye morphogenesis
GO:0048715 P negative regulation of oligodendrocyte differentiation
GO:0048745 P smooth muscle tissue development
GO:0048844 P artery morphogenesis
GO:0048853 P forebrain morphogenesis
Transcript
Level		FPKM:0.83 TPM:0.81
ORF EntryO_TrvaFAMAMG28048_complete:A_TrvaFAMAMG_TR23476c7_g1_i3
Sequence
(Nucleotide)
TGTAATGTTTTATTTTGAGTGCTAAGTTTTTAATATTAAATGTGTTAAGTCTAAATTATT
TTTTTAACAGAGAGCTAGATCAAGCTTGTATGGAGGCAGTAGCTGCCCTATTACACTCAT
TACCACTACAACCTGAAGAATCAGATAGAGGAGATCTAATGGAAGCAAAAAGCCAGCTTT
TCCTCAAGTATTTCACGTTATTTATGAATCTTTTAAACGATTGTCACGAAGGTGAAATGG
AAACGCTTAGAAATGCAACAATACAGGCCATGTCTAATTTACTATCCGCTAACATTGATT
CCGGGCTAATGCATAGTATCGACCTAGGCTACCATCGTGATTTACAAACACGCGCCGCCT
TCATGGAGGTACTTACTAAGATTCTACAGCAGGGAACAGAATTCGACACATTAGCTGAAA
CCGTTCTAGCTGATAGATTCGAACAACTGGTGCAATTAGTCACTATGATATCTGACAAGG
GCGAATTGCCAATAGCCATGGCGTTGGCCAATGTAGTCAGCACATCACAAATGGACGAGT
TGGCCAGAGTGTTTGTCACACTGTTCGACGCCAAACATTTGTTGGCCCCACTACTTTGGA
ACATATTTTATAGAGAAGTCGAGGTATCAGATTGTATGCAAACTCTATTCCGTGGTAATT
CTTTAGGCAGTAAAATAATGGCGTATTGCTTTAAAATATACGGACACGGATATTTACAAG
CTTTGTTAGAACCATTAATAACTTCACTTCTGGACCAGGCTGCAAGTAGACCAGAATTGA
GCTTCGAAGTGGACCCGGCAAGGTTGGAAGCTAATCAAGATATTGAAGCAAATCGAAACA
ATTTGATTGAGCTCACTAAAGAGGTGTTCGATCGTATTGTGAATTCAGCTGATAAGTTCC
CGCCGCAGTTGAGAAGCATGTGCCATTGTTTATATCAGGTACTGAGTAAGAGATTTGCAC
AGTTTCCTCAAACAAGTGTTGGGGCTGTTGGAACTGTGTTATTTTTACGATTCATCAACC
CAGCAATAGTGTCCCCACAAGAGATGGGTATAGTATGCCGTCCCGTTCCCTCAACAGTTA
AACGCGGTTTAATGCTGATGTCTAAAATATTACAAAATATAGCGAACCACGTGGAATTCT
CTAAAGAACAACACATGCTGCCTTTCAATCATTTCTTGAGGGCCCATTTTGAACCGGGAA
GGAAATTTTTCATACAAATAGCGTCAGACTGCGAAAGTATAGATCAGACATCTCACAGTC
TCTCGTTTATAAGTGATGCTAACGTGTTAGCATTGCATCGTTTGTTGTGGAATCATCAGG
AGAGAATTGGAGATTATTTGTCGTGTAGTCGGGACCATAAAGCAGTGGGAAGACGGCCTT
TTGATAAGATGGCAACCCTGTTAGCATATTTAGGACCGCCCGAACACAAACCCGTCGAAT
CATCATCCGGTCTATTATTCTCGTCCTACGCTCGATGGTCGTCCATAGACATTTCTTCTA
CGAATTTCGAAGAGTTTATAGTCAAACATAATATGCATAAAAAAGAAGAGTTTAAAAGTA
TAAAAAGCATGAATATATTCTATCAAGCCGGGACCAGTCGGCTTGGGAATCCTGTGTTTT
ATTTTATATCTAGGAGATACAACTGTTCCCGTATAGGCGACATGAACGCTGATCTCCTGA
TCTACCACGTGATCCTGACCCTGAAGCCGTTCTGCCAGCAACCGTTCGAAGTGGTGGTAG
ACCTCACACACACCAACTCGGAAAATAGGTTCAGGACGGATTTCCTCCAAAAATGGTTCA
CAGTACTACCAGAAGTGGCGTATACAAATGTACACGCTGTTTATATCTATAATTGTAATA
ACTGGGTCAGGGAATATACGAAGTTTCATGAAACTATTCTCGTGCCTTTGAGGAACCATC
GTAAACTAGTGTTTATCGATAACCTAGCAAGGTTGTGCGATTTCATCGATATGGAACAAC
AAAGATTGCCTGGTGCTACTCTAGCTTTGGAAGAAGATTTAAAAGTATTCAATAATGCTT
TAAAACTGTCGCATAAAGATACGAGAGTTGCTATTAAGGTCGGTCCAACGGCATTACAAA
TATGTGCAATCGAGAAAACAAAAGTATTGGGACATCCTGCTATATTAAACGATGTTTACT
ACGCATCGGAAATAGATGAGGTGTGTCTAGTGGACGATAATCAATTTTCTTTATCAATTA
TAAATGAACCAGCTCCATTGAGTTTTATTCACAATGATTGTGATAATATTGTACAATCTA
TCATACATATAAGGAATCGATGGGAATTGAGTCAACCGGACACAGTGACAGTACATCAAA
AGATTCGTCCCAAAGACGTTCCCGGTACGTTACTAAACATGGCGCTTCTCAACCTGGGCT
CGTCAGACCCTAACTTGAGAACCGCTGCTTATAACCAACTCTGTGCTTTGACTGCTACTT
TCCATTTGAAGATTGAAGGACAATTGTTGGAGACTTCAGGTTTATGTATACCATCAAATA
ACACGATATTTATCAAATCTGTGAGCGAAAAATTAGCACACAACGAACCACATTTGACTT
TAGAATTTTTAGAGGAATGCATTCAGGGTTTTCGTGGGTCTACTATTGAATTAAAACATT
TATGTTTAGAATACATGACTCCATGGTTGGCTAATCTAGTACGTTTCGTAAAACCAACAG
AAGATTCTAGACGTCAAAAGCAGGTCGCTCAAATACTAGAAAAATTAATAACATTGACCA
TAGAGGAAACGGAAATGTATCCGTCGGTTCAGGCTAAAATATGGGGGTCTATTGGACAAG
TACCAGAGCTGATAGATATGGTGCTTGATAGTTTCATGCAGAGGAGTGTTAATTCAGGAC
TAGGTTCACCTATGATAGAAATAATGGCTGACACGGCTGTGGCATTAGCCTCGGCTAATG
TACAACTAGTGTCAAAGAAAGTCATCGGTAGAATGTGTCGTGTGGTAGACAAAACCTGTC
ACTCTCCTACAGCGATGCTCGAACAACACATGATGTGGGATGACATTGCTATACTGGCTA
GATATCTGCTAATGTTATCCTTCAACAACTGTTTGGACGTAGCCAGACATTTACCGTATC
TATTCCATACGGTCACGTTCCTAGTATGTTCCGGTACGGTATCGATGAGGGCTTCTACTC
ATGGACTGGTCATTAATATCATACATTCACTTTGTACGTGTACTACGCCGAGTTTTAGTG
AAGATACACAGCGTGTTCTAAAACGATCATTAGACGAATTTGCTCTGCCGTTATTCTATC
AGATGTTTGGTATATCTAAAGTGAAATCTGCAGCGGTCACCGCTTTCAGAAGCCCGTATT
ATAGACATACTCATGACTGGTACGCGGAACCTACTTATGCCGCTTCAGAATGGGGGGGTT
TAACAGACAGAGAGCGTCTACCTCTGCAGTCTTTAGAAACTATTACGGACGCTTTACTAG
AGATTATGGAGGCTTGTATGAGAGATATACCGGATTGCGACTGGCTTGATACTTGGACAA
GTTTGGCAAAGAGTTTTGCGTTTTGCTTCAACCCAGCATTGCAACCGCGAGCTTTAATAG
TTTTTGGATGTATCAGTAAAACCGTATCCGATGACGATATGAAACAGCTATTAAGAATTT
TAGTCAAAGCCTTGGAATCGTTCAATGATCTAGCATTACTAGAAGCTATAATAATGTGTC
TGACTAGATTACAACCATTATTGGACCCTGAATCATTGATCCACAAGGCGTTGTTCTGGG
TATCGCTCTCAGTACTACAACTCGATGACCCTACTCTATACGCGGCAGGGCTCGCACTCA
TGGAACAAAACCTACACACTTTAGACTCGCAGGGACATTTCGAGGAAAAGACTTTAGAGC
AAGTTATGATGGAAACACGGGAACCTCTTGAATGGCACTTCAAACAGATGGACCATGCTG
TGGGATTGAGTTTCCGTTCAAACTTCCACTTCGCGCTGGTCGGTCACCTGCTCAAAGGGT
ACCGCCACCCCGCCGCGGCGACATGCACGCGTACAGCGCGCGTACTGTCCGCGCTACTGA
CGCTAACGGCGCGTAATCTGCCCGACAAGTTTCACGTGACTGCGAACACTGTTGCGTATT
TAACTGCGTCCGTTTGTGTGAGTGAAGAAGTACGTTCTCGTTGCCACGTGAAGCACTCGC
TTCCAAAATGGCTGCCGGACAATTGTGATCATTATTGTCCGAATGCTGAACATAGTCATG
ATTCATCAATGTTGATACATCCACCGTCATCAAGTCATTCCTCGTGTTCAGGACGCAGAC
AAAAATCATGGGACGTTCTCGATCAAGCATCTTGCAGTCATGGCGGTAAATCACCGACAA
TGCAACAATCTAGCAGTGGAGGTCACAGTCCACATTTGATGAACATAACGCATCAGGACA
GCGAAGGCAGAGCTCATAGCATGCAACATGGCGCTAGTGGGGAGGCAGCTAGAGATGTAA
TGGGGGATTCAGATAGTGGGCTTGATGGCGTGGAGGATGATGGTCGTGGATCTCCCGGAA
GTATTGATGATGGCAACGAGCGCCCTGCGTCCACCAAATCTGGAGACAGCGACTATCCTG
AGACTACTAATAAGCAAAACTCAACTGACAAAGACTCGTCAGAACTGAACTGCCTGCTCG
ATCCGTCAGTTTTGACTGACTTCAGTACTCAAGCGCTAGTATTGACAGTACTGGCAACAC
TCGTCAAGTACACAACAGACGAGACTGAGATCAGGATATTATATCAATACCTGGCTGAAG
GATCCGTCGTGTTCCCTAAAGTATTCCCTGTTATTCACAGTCTTCTCGACATGAAGATCA
ACCACGTGTTAATGCATTGTCACGATCAGCTGATACTGAGCGCTGTGCAAAGCATTATAC
AGAACATGATCGCCTCAGAAGATGCAAGTCAACAACAACTGCATTACATGCAGAGTTGTG
GGTTCGGAGGGCTATGGAGATTCGCAGGCCCTTTTACTAAGAAACAATGCACTGCTGAAA
GTGCAGAACTATTCGTGAACTGGCTGGAGGCTTTAGTGGAAACTTGTCTCCCGGGAGGGG
ATGACCCACATAGACTACCACCCCCAGACCCTGACCATACTGATACTGGTGTGGCCCACA
GGCCTACAACATTGTTTTGTTCTAGTCAAGATCCATAGATTAATACTAGGTTATAGAAAA
ATATAGGCTCTAACTAGCATCGAACCCCATAGAAAACTACCCGCAAATAATAATATGAGT
AGTAAGGGTAGATTATATTTAAAAGCTAAAGTTTTGTCATAGAATAGTTGCTATGTAGAA
ATAAAGTCTAATTTAAAAACTTTTACAAGCTTTATATCAACTTGCACTGGATGTAACTAT
ATAAGTTCGGGTGGAATCTTGCGAGTTGAATTTGACAAACTTCCCGGTTTACGATTGAGC
TGACATTTTGCACGCGGATGTATATCGCGTGACAATG
(5497 bp)

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