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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23476c4_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_low_density_lipoprotein_receptor_isoform_X1_[Bombyx_mori]
Ontology
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0022617 P extracellular matrix disassembly
GO:0030198 P extracellular matrix organization
GO:0031012 C extracellular matrix
GO:0032836 P glomerular basement membrane development
GO:0043236 F laminin binding
GO:0043237 F laminin-1 binding
GO:0043394 F proteoglycan binding
GO:0050840 F extracellular matrix binding
GO:0070062 C extracellular exosome
GO:0071944 C cell periphery
Transcript
Level		FPKM:1.29 TPM:1.27
ORF EntryO_TrvaFAMAMG28040_complete:A_TrvaFAMAMG_TR23476c4_g1_i2
Sequence
(Nucleotide)
GATATCAGAGGAGACAGCTTAGAAAAGATAGAACAACAACAAAAGAAGAAAAACAAAATT
CAATCCGTGTTACTCGTATAACATTCCGATAGTTTAAAAAATTACAATGAGTACAGCAAT
CGGCCGTGTGGATTATACAATACGCTTTTAATGCTCTTCATTAATCAATACAAGTTTTCA
ACTAGTAGCAGCAACAACAATTTACACATGGACTCATATATTGTTCACAGTAAAATCTTC
TGGACTGACTGGGAGAGAAATAACCCCAAGATCGAATGGGCAAACATGGACGGCACAGAA
CGGGCTGTCCTTCTCGGTGCTCCTGATGTGAAGCTTCCCAACTCTGTTGCCATCGACTGG
CTAAGAGACCGAGTCTGCTTCGCGGACGCTGGTCATCATGTCATCAAATGCTTGGATCTG
AACAGCAGGCAGATTGAAACGATAGCAGAAAACTGCAGATATCCCTTCGGTTTGGATATC
TACGAGAATAAGTTCTATTGGAGTGATTGGAGAACGTAAGTTATTGGTTAAGTTCTAAAT
GAGATTACGGTCTTCAAACTTTTAAGCCAAACCACAATATACTTCGTTAGAGAAAAATAA
ATTAATTTTCAATGAAATCTTCAACGTCAATCTCTTAATACGAATATGATGAATATAATA
AAATGTCGTTTTAAGTATCTAGTCACCGAGTGCAATCGGCCACTAAATCCCACTTTCATT
GCAGGTTGAAAGTCGAGCACATAGACATAGAAACACAAGCGAGAGGCCAAATAGACATTC
CTCGGTCCACGATACGACTGTACGGTGTGGGCATTGCGCCCAACCAATGCCCTAATGTGG
GCAACGTGTGCTCCCAGCGGAACGGCAACTGCGAGGCCGGGCAATTGTGCTTGCCCGACG
GAAATGGCGGGCGAAGTTGTGTCAACGGCGACCCTACCTACCAACATTAGAAATAGGACT
GATTTTTTAAATACCATATAAGTTTTTATGATGAAAAGATGACTTGAAATCTGTGGAACT
AAAACGTAATGCGGCTTCTTTGCTACATGTAGTATTTTGAGAGTAATAATGTAGGAGTAA
AGAAGCTATATTATGATCATTTCAAATTTTAGTTCCTTCAAATATGAGCGCTATTCAATT
ATTTCATTTAGCACCAAAAAGTCCCTATTCAATTGTAAATTCTCAAAGTGTTGACAAGTT
TTAAAATTATCACCGATAATTCTACGTGTTTATTATAATAAAAATCAAACACAATATTAC
AGAAAATCGTAAAGCATGGTTATTGAAAATTCTTAATAATTAATTTTAATAATATGTTAG
TTTTATTATATTTTCA
(1336 bp)

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