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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23470c10_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739573_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
Transcript
Level		FPKM:4.83 TPM:4.73
ORF EntryO_TrvaFAMAMG27969_complete:A_TrvaFAMAMG_TR23470c10_g1_i2
Sequence
(Nucleotide)
GATCTAATGGCGATGTGTGTGAATTTTTCCGTTTGATAATGTTATGTTTTGTGTTAATTT
ACGACGAATATTGAAATAAACAACATCAAAATTATATGTTAAACATATAACCTTACAACA
GTAATTTCAGTTTTCAATTATTTTAAAGAAAATAAGAGCAAGTGGTGATGGAGGATACTT
CTGAAACTCACATGGAGACAGATGTTACTTCAACCACTGAGGATGTCCTAGAGACGCAGG
AAGTGACTGGATCTAATGGCAATGTCGAGATGGTCATTGTAGTGGAAAAAGTTGAGGAAG
AAGGGGACAGTAGTAAAAAAGAGGATACACCTGTATCAGGCTCTGAAGTCATGTCCACAG
CGCCCATAGAGCTATCTTCAGACGAGAGATCTTCTCCCACTAAAGATATAGAACTACCGA
AGACAGTAATTGTGTCTCCAATGAAAGAAGAAATACAGTCAACTAGTCTATCAAATACTA
ATGCAAAGGTTACCGTTTCTCCTACCAAAAATACTTCACCAGTCAAATCACCGGTTAAAT
CAGCTCCAGAGAATAACCCTACAGAATCCTTAAAGACTGAAGTAGCTGATTCATCAAGTA
AAATAGATACTTTAGAATCAGGTATAAAGAATAAAGTTGATAAAAGACCCCAAAAAATGG
TTGTGGTCACTCCAGTACTCGATGAATCTCATAAAGAAATACAACCAAAGGAACCCATTA
TACCAACTATCACTGTAGAAGACACTACAGTACCTAATAAACCTAATGAGGAAGAAAAAA
TGGAAGTAGATTCAGAAAAACAAGTTGAGCCAACAGCTACCTCTGTGCCACCGGTAGATG
TCACAGTTCCGACAGATAACCTCAATACCTCTCAGGAAACAGAAGTACAAGAAAAAGATC
ACAATAAAAGCATCAGTAGAGAGCTCAAGTCACTGATAAAGTCTGCAAAAGAGTCCAAAA
TAATCAGTGAATGTACTCAATTAAAAACAAAGACCAGAAAGTCTAGAACACCTTTAGACA
CATCCAGCACCTTAAATACTTCAATAGATGCTGAAAAACTACAAGGAAATCGCAGACACA
GTAGTAACTCACAAAAAAGCAATTGTAGTGAGAAGTCAGACAAGCCTCCATTGAAAAGGT
CTATGCGGTCACAGAATCCTGAATTCGTTAACAAAGTCAAGCTATTTCTGAATTCTGTTA
CGGGAAAAATGCAGAAAGAAGATGATATGACTGATGATGAATTAGAGGAGAATAAAACAA
TTGAAAAAGTAGAAGGTTCAAAGTCACAGCCAACTACTCCAAAAAAAGAAAAAAGTTGAA
GCCAGTCAAAGTCCAGGTAAACTCCAGTCTGATTTATATTGCTGGAGGTGTCATTGGCAA
GTTGAACAGTCAGAGAATGAGAAGACTCACGCTCCAATGCACTGTACAGTCTGCCCTCGG
TCATACCACTACCGATGTCTGTCCAGTGCTGAGCGTAACAAAATAACTATCGAAGAAAGC
TGGGTGTGTCCAGATTGCCTGATAATATTGAATGCAGAAAACTCTGAGACTAGGTCACCA
GCTATGAAAAAGATATCAATGGCAATGCTATGTGAACTCCTCAATTTTGCATTAGGAAGA
ATGATGGATCTCAATGGGGTTGAACCCTTCATGAATCCAGTCGATCGTGTCTCTTTCCCT
GATTACGATAAATACGTTGTCCATCCAATGGATTTAAATCGTATGAAGGCAAACATTGCC
GACGGCGTATACGCAAGCACAGAGTCTTTCTGTGCAGACGCGCAATGGATACTGCACAAT
AGTATAATATTCAACACACGTGAGTTGGTTCAATCTAAGTTAACGGGTGCGGCGCGTGCG
TTGATGCGGTCGTGTCGAGCGGAGATGGGCGAGATCGAAGCGTGTCCCGAGTGCTACGCG
GCCGCGCACGCTCGCAAACCGACCTGGTTCACGGACGTTTGTTCCACGCCGCATATACTG
CTCTGGGCTAAACTTAAAGGTTTCCCGTACTGGCCCGCGAAGGGCATGTCGGTGAGTCCG
GCGGGGCTGGTCGACGTTCGTTTCTTCGGGGCTCACGACCGCGCCTGGGTGCCCGCCAAG
GACTGCTTCCTCTACTCCGAGAAAGATCCCAACAACTTCAGAACTAAGAGACAGGATATA
CTCGATAGTATGCAAGAAGCAGAAGAGCATATCCGAAATATATCAAGGAAGTATGGAAAA
TTCGTCTACCCACCTTTCAAGACACAATTTGATCCTACGAAACTTAATGAACAATTGAAA
ATGATGATACCATCATTCGAAGGTGAAATACGCGTGGCGGTCAAAGATAAATCACCGAAC
ACTCCCAAAGACAAGTGTAGAAGCAACTCTAAAAGTTCAAAGAGCTCTGCCAACGACAGC
GATATTAGCGAAACGGAAGATCCAAATTCGGCGTCTATCAAGGCAAACAACAATGTTACA
GAAACGAAGAGTGATATCAAACTCATAGAGAATGAAAAGAAAGAAGAAGCGTCAACTCCA
AAGGAGACAAAAGACACTGAAAGTTCAAGAAAACGACGTCGTTCTTGCATAACTGAACCT
CCTCCCAAAACCACACCAATTAGCGAAAAGAAAAAACGAGTTGACGATAAACCTGACAAA
AAAGATACACAAGAAAAAACTGAAAAAGATACACCGAAAAAAGAAACGCCACAAAAAGAA
ACACCGAAAAAAGAAGAAAATAAAAGATCGCAGAGTGTCATCATACCGATCGATGACGAT
GATTCGATTATTACAATCGAAGAATCGAATGATTCTGTCAAAGATAAAGCAAAAGACAAG
ATCGAGAAAGTCCGAACAGTCACTCCTATTAAGATAATATTATCGAAACAAAACAAACAT
TCGCCAAGATTGAGTACAAGTAAAGATTCTCCAAAAACTAGCACACCCATCAACAGATCT
CTTTTAAAAACACCTAAAGAGGAAAAGACCAGAACTAAAATTAAAATAGTCATGCCCTCC
TCAGAAAGGAGAAGTAGGGAAGAGAGAAATAAACATGAAAAGAGAAGGAACTCTAAAAGC
AGCAGATCATTTAATGGCACTTTCACTTCTAAAACCGAAAAGGGTGACAAGAAAAGCGAT
AAAAGCACTGAAAAAACTAAAGACAGACCTGCAGATAAAGTTTCTGTTATCAAAATTAAG
GAGGTTATAAAAACTGTCGATAAAACTCCACAGAGAGAGACTCCTAAGTCGTTCAAGGAT
CGTCTTAATTTTGACGACGATATTGCTCTAGCCAAAATGGCGTCCGATAGTTCAAAGAAC
AACTCAGTCATAATGAGCAATTCTCCCGGAATGCCTACAATCAGCAGCGTAAGAAGTCTG
TCTACATTAACTCCAGACACGTCTACGACTAACACGAAAACGAATACAACTCCAGCCTCC
ATAGATATTACAGTAGACAGCAGTTCAGATAGCACAGAAAATACAGTACAAAAACCAATT
GAATCTAAAGTAGGCAAAGTTGGTGTTCGCGCATTCGCAAGAATGACGTCACCAAATCGA
AGCAAAAACGAAAATCTGCAGGTCGAAATCAAATCCGAGCCCATCGACTTGGACGATGAA
AGTCGACATTTGGAGAAAATGGATCTCATGAACGCGTTCAAACTGCGACCGGTGATACGA
TCGTCCAATTTACGTGAGGTGCGATTCAATAAGGTAGTAGTAACCCCACTACCACGAAAA
GCCCCAACGAGCATCCCAGAAATCCGACCACGAGCGAAGAAATCGTTCCCTCAAGCGAAG
AAACCCGAAGACGGTCAACTAAACGGGAAGAACTCCATGGTGTACATACCGATCCAGCCC
GCCATCACGCAGGCGCCCGTCCGCATCACCAGGACGGCCAACGGACCCGTGAGCCAGGCG
CCGAGGTGTGCGCCGACCGTTACTGTTTCAGGAAACAGCAACTTGAGCACAATGACAACT
CAAATACTACCACCTACACTAACATCTCCGACCACCGCTTTAACAAGTCCCATACAATCA
GCGCCCACTATTGGACAAGCGCCCACCATTGGACAAGTGCCCACTACGGTCCACACGGTG
CCACTCATGACGTCTGTCAACGGACAATGGATGTTTAGTCTGCAGCCGGTCATGTCAGTT
GGCGCTATTGAATCAAACACATCACCGCCCCTCGTGAACGGTTTCCCCGAGAGATTGAAC
CAAGCGTCAATAGTTCCTACAGTAGTGTCCCCGGTCTCAGTACAAGCCGGTGTGTCTACT
GCGCCTACATTGACGGCGGGAATAACCAGTCGGACTAACGATATTGTGATTACTAATACT
CCTGAACTTCCAAGACTACAGCAGCGACCTACTTTAGTGAACCCGTTAGACCCGAGCACG
CCAGCCCCGCCTCTACCGGTGCCGGCCTCCGTCGGACCGATGACCACCAAACTTAACCAG
AGCGCTTCCAAGCTAGCGGCCTTCTTCCGTGTGTTGTTAGAGGAATCAGTGGAGCATATT
GACGACCCATCCGCGCAACTTGCTTCATTGAAACTACAACTCGAACAGAGCAAATGGAGG
CATCATCAGAGATTGGAAGAAATCAAACATAATTATGAATTATCTATAACGGAAATGCGG
TCAACATTCGAGAAGGAGAAACAACGTCTGATCAACGAAACGAAACGAGTCTCGCAAATT
GAGACTGACAACGCCGTCAAACTGACCAAGACTAAACAATGGTGTGCGAATTGCAGTCAA
GAGGCTCACCTGTACTGTTGTTGGAACACGTCGTACTGCGACTACCCGTGCCAGCGCGCG
CACTGGGCGCACCACTACGCCGCGTGCGCGCAACTACCGACCGAAGGTAACAACGAAGGT
TCCGCTACCGAGGGAAGGATATACACAGATAATATGCCACCTCTGAAGAGGGGCACCGTG
GTGCCAACCCTCACGGTCGGCGGGAAGCTTGCTTCGACGAGGCCGGCGCAGGACAACACG
CAGAAGTCATCGTCCATTATCATGAGCATGATCGAAGATACGAATGGAAATCAAACTATA
AAATGCGTCGGAACTTACAACGCTAACAAACCGACATCCGGGAGCACGCAGGGACCTCCT
CTAATACTCAATAAACAGATAATGAACGAGGAAAACAAGAAAGTGGTGACATCGGGAGGT
TACTTCATAGTTGGAAGTTCAGCCGGAAACATTAACGCAGCCAAACTCAATACAGTGCAA
CAGTTCAGATAATCATTAACTAACTTTGAGACTTTTGAACTAAAACTGCAATAATACTGA
TAAATAGATTTAAAGTGTAACTTGTGACTCAGTGAAGTGAATGTTTGTCGTGTATAATTC
ATTAGATGTATAAATATGTTAGTGATCAGAAGTATATGAATCGCTCAAATTATCTCTACA
AATCTGGCGAAATGATGAATGACTTGGCTTATCGGAAGTCAAGCTTAAAAAGGAACTTTT
CCAATGCAAATCAATCGATACCTCCCACGTAAGTTGT
(5497 bp)

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