SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23470c10_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC101739573_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001106 F transcription corepressor activity
GO:0003682 F chromatin binding
GO:0003712 F transcription coregulator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0042393 F histone binding
GO:0043197 C dendritic spine
GO:0043198 C dendritic shaft
GO:0046872 F metal ion binding
GO:0047485 F protein N-terminus binding
GO:0051491 P positive regulation of filopodium assembly
GO:0060999 P positive regulation of dendritic spine development
GO:0070491 F DNA-binding transcription factor binding
GO:0098815 P modulation of excitatory postsynaptic potential
GO:1902897 P regulation of postsynaptic density protein 95 clustering
GO:1902952 P positive regulation of dendritic spine maintenance
Transcript
Level		FPKM:1.10 TPM:1.08
ORF EntryO_TrvaFAMAMG27963_complete:A_TrvaFAMAMG_TR23470c10_g1_i1
Sequence
(Nucleotide)
GATCTAATGGCGATGTGTGTGAATTTTTCCGTTTGATAATGTTATGTTTTGTGTTAATTT
ACGACGAATATTGAAATAAACAACATCAAAATTATATGTTAAACATATAACCTTACAACA
GTAATTTCAGTTTTCAATTATTTTAAAGAAAATAAGAGCAAGTGGTGATGGAGGATACTT
CTGAAACTCACATGGAGACAGATGTTACTTCAACCACTGAGGATGTCCTAGAGACGCAGG
AAGTGACTGGATCTAATGGCAATGTCGAGATGGTCATTGTAGTGGAAAAAGTTGAGGAAG
AAGGGGACAGTAGTAAAAAAGAGGATACACCTGTATCAGGCTCTGAAGTCATGTCCACAG
CGCCCATAGAGCTATCTTCAGACGAGAGATCTTCTCCCACTAAAGATATAGAACTACCGA
AGACAGTAATTGTGTCTCCAATGAAAGAAGAAATACAGTCAACTAGTCTATCAAATACTA
ATGCAAAGGTTACCGTTTCTCCTACCAAAAATACTTCACCAGTCAAATCACCGGTTAAAT
CAGCTCCAGAGAATAACCCTACAGAATCCTTAAAGACTGAAGTAGCTGATTCATCAAGTA
AAATAGATACTTTAGAATCAGGTATAAAGAATAAAGTTGATAAAAGACCCCAAAAAATGG
TTGTGGTCACTCCAGTACTCGATGAATCTCATAAAGAAATACAACCAAAGGAACCCATTA
TACCAACTATCACTGTAGAAGACACTACAGTACCTAATAAACCTAATGAGGAAGAAAAAA
TGGAAGTAGATTCAGAAAAACAAGTTGAGCCAACAGCTACCTCTGTGCCACCGGTAGATG
TCACAGTTCCGACAGATAACCTCAATACCTCTCAGGAAACAGAAGTACAAGAAAAAGATC
ACAATAAAAGCATCAGTAGAGAGCTCAAGTCACTGATAAAGTCTGCAAAAGAGTCCAAAA
TAATCAGTGAATGTACTCAATTAAAAACAAAGACCAGAAAGTCTAGAACACCTTTAGACA
CATCCAGCACCTTAAATACTTCAATAGATGCTGAAAAACTACAAGGAAATCGCAGACACA
GTAGTAACTCACAAAAAAGCAATTGTAGTGAGAAGTCAGACAAGCCTCCATTGAAAAGGT
CTATGCGGTCACAGAATCCTGAATTCGTTAACAAAGTCAAGCTATTTCTGAATTCTGTTA
CGGGAAAAATGCAGAAAGAAGATGATATGACTGATGATGAATTAGAGGAGAATAAAACAA
TTGAAAAAGTAGAAGGTTCAAAGTCACAGCCAACTACTCCAAAAAAAGAAAAAAGTTGAA
GCCAGTCAAAGTCCAGGTAAACTCCAGTCTGATTTATATTGCTGGAGGTGTCATTGGCAA
GTTGAACAGTCAGAGAATGAGAAGACTCACGCTCCAATGCACTGTACAGTCTGCCCTCGG
TCATACCACTACCGATGTCTGTCCAGTGCTGAGCGTAACAAAATAACTATCGAAGAAAGC
TGGGTGTGTCCAGATTGCCTGATAATATTGAATGCAGAAAACTCTGAGACTAGGTCACCA
GCTATGAAAAAGATATCAATGGCAATGCTATGTGAACTCCTCAATTTTGCATTAGGAAGA
ATGATGGATCTCAATGGGGTTGAACCCTTCATGAATCCAGTCGATCGTGTCTCTTTCCCT
GATTACGATAAATACGTTGTCCATCCAATGGATTTAAATCGTATGAAGGCAAACATTGCC
GACGGCGTATACGCAAGCACAGAGTCTTTCTGTGCAGACGCGCAATGGATACTGCACAAT
AGTATAATATTCAACACACGTGAGTTGGTTCAATCTAAGTTAACGGGTGCGGCGCGTGCG
TTGATGCGGTCGTGTCGAGCGGAGATGGGCGAGATCGAAGCGTGTCCCGAGTGCTACGCG
GCCGCGCACGCTCGCAAACCGACCTGGTTCACGGACGTTTGTTCCACGCCGCATATACTG
CTCTGGGCTAAACTTAAAGGTTTCCCGTACTGGCCCGCGAAGGGCATGTCGGTGAGTCCG
GCGGGGCTGGTCGACGTTCGTTTCTTCGGGGCTCACGACCGCGCCTGGGTGCCCGCCAAG
GACTGCTTCCTCTACTCCGAGAAAGATCCCAACAACTTCAGAACTAAGAGACAGGATATA
CTCGATAGTATGCAAGAAGCAGAAGAGCATATCCGAAATATATCAAGGAAGTATGGAAAA
TTCGTCTACCCACCTTTCAAGACACAATTTGATCCTACGAAACTTAATGAACAATTGAAA
ATGATGATACCATCATTCGAAGGTGAAATACGCGTGGCGGTCAAAGATAAATCACCGAAC
ACTCCCAAAGACAAGTGTAGAAGCAACTCTAAAAGTTCAAAGAGCTCTGCCAACGACAGC
GATATTAGCGAAACGGAAGATCCAAATTCGGCGTCTATCAAGGCAAACAACAATGTTACA
GAAACGAAGAGTGATATCAAACTCATAGAGAATGAAAAGAAAGAAGAAGCGTCAACTCCA
AAGGAGACAAAAGACACTGAAAGTTCAAGAAAACGACGTCGTTCTTGCATAACTGAACCT
CCTCCCAAAACCACACCAATTAGCGAAAAGAAAAAACGAGTTGACGATAAACCTGACAAA
AAAGATACACAAGAAAAAACTGAAAAAGATACACCGAAAAAAGAAACGCCACAAAAAGAA
ACACCGAAAAAAGAAGAAAATAAAAGATCGCAGAGTGTCATCATACCGATCGATGACGAT
GATTCGATTATTACAATCGAAGAATCGAATGATTCTGTCAAAGATAAAGCAAAAGACAAG
ATCGAGAAAGTCCGAACAGTCACTCCTATTAAGATAATATTATCGAAACAAAACAAACAT
TCGCCAAGATTGAGTACAAGTAAAGATTCTCCAAAAACTAGCACACCCATCAACAGATCT
CTTTTAAAAACACCTAAAGAGGAAAAGACCAGAACTAAAATTAAAATAGTCATGCCCTCC
TCAGAAAGGAGAAGTAGGGAAGAGAGAAATAAACATGAAAAGAGAAGGAACTCTAAAAGC
AGCAGATCATTTAATGGCACTTTCACTTCTAAAACCGAAAAGGGTGACAAGAAAAGCGAT
AAAAGCACTGAAAAAACTAAAGACAGACCTGCAGATAAAGTTTCTGTTATCAAAATTAAG
GAGGTTATAAAAACTGTCGATAAAACTCCACAGAGAGAGACTCCTAAGTCGTTCAAGGAT
CGTCTTAATTTTGACGACGATATTGCTCTAGCCAAAATGGCGTCCGATAGTTCAAAGAAC
AACTCAGTCATAATGAGCAATTCTCCCGGAATGCCTACAATCAGCAGCGTAAGAAGTCTG
TCTACATTAACTCCAGACACGTCTACGACTAACACGAAAACGAATACAACTCCAGCCTCC
ATAGATATTACAGTAGACAGCAGTTCAGATAGCACAGAAAATACAGTACAAAAACCAATT
GAATCTAAAGTAGGCAAAGTTGGTGTTCGCGCATTCGCAAGAATGACGTCACCAAATCGA
AGCAAAAACGAAAATCTGCAGGTCGAAATCAAATCCGAGCCCATCGACTTGGACGATGAA
AGTCGACATTTGGAGAAAATGGATCTCATGAACGCGTTCAAACTGCGACCGGTGATACGA
TCGTCCAATTTACGTGAGGTAGTAGTAACCCCACTACCACGAAAAGCCCCAACGAGCATC
CCAGAAATCCGACCACGAGCGAAGAAATCGTTCCCTCAAGCGAAGAAACCCGAAGACGGT
CAACTAAACGGGAAGAACTCCATGGTGTACATACCGATCCAGCCCGCCATCACGCAGGCG
CCCGTCCGCATCACCAGGACGGCCAACGGACCCGTGAGCCAGGCGCCGAGGTGTGCGCCG
ACCGTTACTGTTTCAGGAAACAGCAACTTGAGCACAATGACAACTCAAATACTACCACCT
ACACTAACATCTCCGACCACCGCTTTAACAAGTCCCATACAATCAGCGCCCACTATTGGA
CAAGCGCCCACCATTGGACAAGTGCCCACTACGGTCCACACGGTGCCACTCATGACGTCT
GTCAACGGACAATGGATGTTTAGTCTGCAGCCGGTCATGTCAGTTGGCGCTATTGAATCA
AACACATCACCGCCCCTCGTGAACGGTTTCCCCGAGAGATTGAACCAAGCGTCAATAGTT
CCTACAGTAGTGTCCCCGGTCTCAGTACAAGCCGGTGTGTCTACTGCGCCTACATTGACG
GCGGGAATAACCAGTCGGACTAACGATATTGTGATTACTAATACTCCTGAACTTCCAAGA
CTACAGCAGCGACCTACTTTAGTGAACCCGTTAGACCCGAGCACGCCAGCCCCGCCTCTA
CCGGTGCCGGCCTCCGTCGGACCGATGACCACCAAACTTAACCAGAGCGCTTCCAAGCTA
GCGGCCTTCTTCCGTGTGTTGTTAGAGGAATCAGTGGAGCATATTGACGACCCATCCGCG
CAACTTGCTTCATTGAAACTACAACTCGAACAGAGCAAATGGAGGCATCATCAGAGATTG
GAAGAAATCAAACATAATTATGAATTATCTATAACGGAAATGCGGTCAACATTCGAGAAG
GAGAAACAACGTCTGATCAACGAAACGAAACGAGTCTCGCAAATTGAGACTGACAACGCC
GTCAAACTGACCAAGACTAAACAATGGTGTGCGAATTGCAGTCAAGAGGCTCACCTGTAC
TGTTGTTGGAACACGTCGTACTGCGACTACCCGTGCCAGCGCGCGCACTGGGCGCACCAC
TACGCCGCGTGCGCGCAACTACCGACCGAAGGTAACAACGAAGGTTCCGCTACCGAGGGA
AGGATATACACAGATAATATGCCACCTCTGAAGAGGGGCACCGTGGTGCCAACCCTCACG
GTCGGCGGGAAGCTTGCTTCGACGAGGCCGGCGCAGGACAACACGCAGAAGTCATCGTCC
ATTATCATGAGCATGATCGAAGATACGAATGGAAATCAAACTATAAAATGCGTCGGAACT
TACAACGCTAACAAACCGACATCCGGGAGCACGCAGGGACCTCCTCTAATACTCAATAAA
CAGATAATGAACGAGGAAAACAAGAAAGTGGTGACATCGGGAGGTTACTTCATAGTTGGA
AGTTCAGCCGGAAACATTAACGCAGCCAAACTCAATACAGTGCAACAGTTCAGATAATCA
TTAACTAACTTTGAGACTTTTGAACTAAAACTGCAATAATACTGATAAATAGATTTAAAG
TGTAACTTGTGACTCAGTGAAGTGAATGTTTGTCGTGTATAATTCATTAGATGTATAAAT
ATGTTAGTGATCAGAAGTATATGAATCGCTCAAATTATCTCTACAAATCTGGCGAAATGA
TGAATGACTTGGCTTATCGGAAGTCAAGCTTAAAAAGGAACTTTTCCAATGCAAATCAAT
CGATACCTCCCACGTAAGTTGT
(5482 bp)

- SilkBase 1999-2023 -