SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23467c5_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_potassium_voltage-gated_channel_protein_Shal_[Papilio_polytes]
Ontology
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005250 F A-type (transient outward) potassium channel activity
GO:0005251 F delayed rectifier potassium channel activity
GO:0005267 F potassium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007268 P chemical synaptic transmission
GO:0008076 C voltage-gated potassium channel complex
GO:0008306 P associative learning
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030425 C dendrite
GO:0034765 P regulation of ion transmembrane transport
GO:0042995 C cell projection
GO:0043204 C perikaryon
GO:0051260 P protein homooligomerization
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
Transcript
Level		FPKM:1.49 TPM:1.46
ORF EntryO_TrvaFAMAMG27927_5prime_partial:A_TrvaFAMAMG_TR23467c5_g1_i3
Sequence
(Nucleotide)
TTTTTTTTTAAACTACAATTACACTTACATCTATATATTCAAATAAAATATCTAATAATA
TAATAAACGTTAGTCTAGATTGAAATATTTAAAAATAGTTGAATTTGCGACATGTTTCTT
TACAAGCGTGCGCGTTTTGCGTAAAATGTGATTTATGGTAAATGCATCAGTTGTTCCTTT
CATAATCTTACTAACTAATGTCCAGTTAATACGGATAGTAATTAGATAAAACAATATAAT
TTTAAAATACTATTTTCCGGAAATTCCTAGTAAAAATAATTCCTAGTACAAAATAAAACA
GACAGTTAAAAAACATCACATCATTTATAAACGCAGAGTAAAATTTTACTCAACAAAATT
TAATTTATACTCTCGTTTGTGACAATGATAAAGAAACATGTTGCAAGCTCAACTAATATC
GTTTCCTATTGCATTCATAAGATTCCTTCGTTCACTAGAACAACTAGAAGTCGCTACAAG
ACACAGTACATTCGAAAACTGATCGATTACATTGACACGACCCGTGAAGTTTCACTAGCT
CACACTAAAGTTATTGTTAATATTAATTAAAGATACTACTTTCTTCATTATTGTATTTTT
CTACTTTTTACAGATAGAATATATCTTTGCATAGATCTTTGGTATTGGTTTGAAATCAAT
AATAAACAACACTGTAGAGTGTGACGCTTGCAAAACTTAAGGTCGACAGCAGGAAAGATT
AAGTTAAATACACCCTATATCAATTTGTATGTACTTACTAAAGAAACTTCACGAATCGTT
ATAGACTATATTAAGTTTAACTAGTCCGTCAACTCTAACCTACTCGTCACTAACACAGAG
CTACGTCCATGAAATAAACTTCGAAGGCACTAGATTTCTAGTGTTTAAACGAACATAACA
TTCCCCGTCCAGTGACTATACATACCTTCAGTTTAAGAGCGATGACAGACAGACAAGAAA
GTCAACTTGCATACTATCTCACCTGTGTGTCACCCTCTTAACAGACAGCAACTTACTTAT
TTTAACACGATAAACACAACACACAACAGTTTCAGAATTGATTCATACCCAAAAACCTTG
ACAGTTGTACTTACCGTGTTAACATTCATTATTCCAAATTAAAATCCAACGTCATTCATC
ATAATTCCCGGATTTTTTTCGAAGCTGGTAACATTTACTTGACATTAGCTAAACGTCAAA
CTGACAAACGCAAAGATATCTTGGCCATTGTTGTTAAAGATATAACTACGCTAAAATTAC
GATAAAAAGGAACTATATTTCTATTAAAATGTTAACATTGGAGAGCTCAACACCAGTTAA
AATCTATTTAGTTAAATGTATCTAAACATTGATATGATTCGAACAGCTATTGACTATATT
GAATAATTTTGAAACTACATGTCTTTTCTAAAACATTCATATAATTAAAACACTCGAATT
CGACATATGATCATACTTTATACAGGGCGTCCCGAAATTATAGAACGGAGAAAAAGTAAC
TGAAAAATTGTTAAAAGAATAAATTTGCTGATTGGTCATATATTTTTTTAAAGTAACAAA
CCAAATTTTTTCAAATGCTTCATTTGTCTGTGAAAAGAATTAAATATGAAAAAAAAACAA
ACTTATTTTTTTTTAATGTCAACCAAAATTTTTTTTTTTTTGATTTAAGATTATAGGCCT
GATAACAAGATCTTTAAGCCATGTCAACCAAAAGCATTATAAAAATAATGATGTGATTGA
TTGGAATGCAATGTAGTGAAATGCAACGAAATGCAATGATTTTTTTATGACTGAAACGAT
TGTGGAATGAGTTGAAATGAAATGAAAGGGTATGAATTATGAAGTTAACAATGACTTGCA
ATTAATTGCAATGTTTTAGTGAAATGCAGTGTAATCAAGTACACTGTACTTGGGTAGGTA
TAAAGAGTAATGTAATGAAATGTAATTTTGTGAAGTTTTGTGAAATGATTAAAAGCAATG
TCTATAAAAATGTTTTTTTAAGAAAATATTTTTTTAAATTTAATTCGAAACGAAGACAAA
CAGGCAATTAAAAAAAGTTAAATTATAGTCTCAATATTAATCGATTGATCAAACATTACA
GTTTTGTTAACTTTTTCTTTTGTTGCATATTTTTGGACACCCTGTGCACTCACAGATGTT
ATATTATATAATAAATCAAATATACCCTTTTTACCCAAACATTTCAATATAATTCAACGA
TCAAAGACTAATACACTCACTCCGCCTTTTTTGAGTATATTTCCATTTATTATATGACAT
TAACAATTTATTGTAAATTTTTAATTAGCAATTAAAACCTTATATAATACTGTTCTCGGT
TAAAACTACATTTGATGTATTTGCTAATAGAGGACACGTAAAATTGAACGACACATAGAA
CACTCATATTTAATCTTCACCAAATTATTTATCACTGAATATATTCCATTCCGTTTCCTA
CACGTAACATCAACAACTTGGAATGGAAGTAGCTAGTATTTCTCTATTTTATAATAGAAT
TGGAATGACTGTGGTCCATTCCATTTATGTTACAATCGACACAGAAATTTCAATCTTATA
AATAGAATAGATTTAAGACTACGATCAAATATAGCGAGATACACAGTTCCGAACAGAGAC
CTGGAAAATATTGTCTCCAAAACTTACAACGATGATTATTACTTCCACAAGTATTTTGGT
AAATAAAGTCTATTGCAAATGTAAGGAACATATTCGTGACAAGCTATTTTTACCTAGTCA
TATTTGATCGAAGAATGAATTAAAATTACAATCACTTCAATTTACAAGATCGAATCCAAG
TCGATCCAAGTCAGTTCTTCAAGGAGCACAAGTTCATTCCATTTCACAAACAGAACGACA
GATCCAACACATCCACACACCCAGGGCAGTTTCCTTTACACTTAAACGTTTAATTAAAAT
TGATTATTATCTAGTAATTGTCGTGGAATTTGTCTATAAAGTCACACGTATGTTTCGACG
TGGCGTGAAGGATGGGCCCGGTCCTAGAACGAGGCTTCCACCAGGTAGGTGCCGTCCATG
GCAACACCGGTCTGGTTTCCTTGTACCGTGCTGCCCGCGGGAATGTACTTACCGCATGCT
TGCTGATATTTTTGCGGGCAGCAGCCACACCGCGCGCAGCAGGCGAGCAGAGCGGGCGCG
CGCGAGGAGTGCGCGGGGGACGCCAGCGGGGAGGGGGAGCCCGGCCTCTTCGCCGCGCCG
TTGAACGGGTTCTCAATCTCAACGAACTCCCGATCCGTGGTCCTCTCCAAGCACCGTAGC
AGATGATGATGCTGCAACTCAAAAATGTCCTCATCTCTCCCCGCGTCGTCAAGTTCCACT
CCCGACTCCTGGGCGGCGAGGCGGGCTTCTGCTGCTTTCTTCTTGGAGACGAAGGCGGCT
CCTGATGATGCTTTGGCGATGCGGATACGGGCGAGACGCGCTTTCCGCTGCGCTTTCCTC
TTATCAGCCCTCTGGTTCTGATGGTAGATCCGTGAGAAGTTGGACACGATAACCGGCACA
GGCAGGGCTATGACCAACACTCCGGAGAGAGAGCAGACACCGCCCACGATCTTACCGGCT
ATGGTGCCTGGGACCATGTCACCGTAGCCGAGCGTCGTCATCGTCACGATGGTGTACCAG
AAGGCGGCCGGGATCGACGTGAAGTTGGTGTCCTGCTCGTTCTTCTCCGCGTAGAACATT
ACTGTCGCGAATATGATGATGGCCATCGCCAGCGAGAACACCAGGAACCCGAGCTCGCTG
GCGCATGACTTGAGCGTGTACCCCAGGATCCGGAGCCCCTGCGAGTGACGCGAGAACTTG
AAGATCCTAAAGACGCGGAACACCCTAAGCGTGACGAAGGCGCCCGAAACGTCGTCGTTG
TCGGTGATGCCGAGCCCGATGTAGTAGGGCAGGATGGCCACCACGTCGATTATGGACATC
ACGGAGCGCACGAACTTGCAGCGGTCCGGCGCCGCGAACAGCCGCAGCAGGTACTCCGCC
GTGAAGATCATCACGCATGCCGTGTCCAGGCAGAAGAACACTATCTTGTAGCGCTCCCCA
CAGGGCAGCGTCCCGGCGCGCCCCGGCCGATGACCGCACGGCACTGTCTCCACCACGTTA
GCCATCACCGACACGGCTATGAAAAATCCAGTCACATAGTAAAACACGAGCGCCGCGGTC
GAGGTGTGCGGGTTCTCGAAGGCGCGCCACATCTTCTGTCGCAGGTCCGTGAGCTGCGGC
AGGCTCTGGTCGCCCGCCTCGCTGAGCTTGTCGTCCATGAGACGCTCGGCATTCTCGCGC
TTCCTGTCGCGGTAGTCCTCGTAGCAGCAGTCGCCGATCACGTCGGGCAGGATGCCGAAG
AAGGCGAGCTCCTCGTCGTAGCCCGTGAGGCACTCGTGCTTGGGGTAGTGCAGCTTGCCA
GTGCGGTAGTAGTTGAGGATGTGCCTGAAGATGTCGGGATCTCTGTCGAAGAAGTACTCG
CGGCTGTCCTCGTCGTAGAAGAACTCTCTTTCGGAAGACCCGAGTAACGAGTCGGGGTAC
TTCTCTAGCGTGTTCCTCCAGGTCTCGAAGCGGCGCCCGGACACGTTGATGAGGAGCTTC
TCGTCCTCAGCGCGGCGGCGGTCCTTGGGCACGGGCGGCGGCGGGAGCGGATGGGTCGCG
ATGGGGACCCGCCCGATGGCTGCGGCTCTGGCGAAGGGCAGCCAGGCGGCGACGGACGCC
ATAGCGTGTCCTCGCG
(4756 bp)

- SilkBase 1999-2023 -