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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23467c5_g1_i2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_potassium_voltage-gated_channel_protein_Shal_isoform_X1_[Amyelois_transitella]
Ontology
GO:0005216 F ion channel activity
GO:0005244 F voltage-gated ion channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005250 F A-type (transient outward) potassium channel activity
GO:0005251 F delayed rectifier potassium channel activity
GO:0005267 F potassium channel activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006813 P potassium ion transport
GO:0007268 P chemical synaptic transmission
GO:0008076 C voltage-gated potassium channel complex
GO:0008306 P associative learning
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030425 C dendrite
GO:0034765 P regulation of ion transmembrane transport
GO:0042995 C cell projection
GO:0043204 C perikaryon
GO:0051260 P protein homooligomerization
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
Transcript
Level		FPKM:0.25 TPM:0.24
ORF EntryO_TrvaFAMAMG27925_5prime_partial:A_TrvaFAMAMG_TR23467c5_g1_i2
Sequence
(Nucleotide)
TTTTTTTTTAAACTACAATTACACTTACATCTATATATTCAAATAAAATATCTAATAATA
TAATAAACGTTAGTCTAGATTGAAATATTTAAAAATAGTTGAATTTGCGACATGTTTCTT
TACAAGCGTGCGCGTTTTGCGTAAAATGTGATTTATGGTAAATGCATCAGTTGTTCCTTT
CATAATCTTACTAACTAATGTCCAGTTAATACGGATAGTAATTAGATAAAACAATATAAT
TTTAAAATACTATTTTCCGGAAATTCCTAGTAAAAATAATTCCTAGTACAAAATAAAACA
GACAGTTAAAAAACATCACATCATTTATAAACGCAGAGTAAAATTTTACTCAACAAAATT
TAATTTATACTCTCGTTTGTGACAATGATAAAGAAACATGTTGCAAGCTCAACTAATATC
GTTTCCTATTGCATTCATAAGATTCCTTCGTTCACTAGAACAACTAGAAGTCGCTACAAG
ACACAGTACATTCGAAAACTGATCGATTACATTGACACGACCCGTGAAGTTTCACTAGCT
CACACTAAAGTTATTGTTAATATTAATTAAAGATACTACTTTCTTCATTATTGTATTTTT
CTACTTTTTACAGATAGAATATATCTTTGCATAGATCTTTGGTATTGGTTTGAAATCAAT
AATAAACAACACTGTAGAGTGTGACGCTTGCAAAACTTAAGGTCGACAGCAGGAAAGATT
AAGTTAAATACACCCTATATCAATTTGTATGTACTTACTAAAGAAACTTCACGAATCGTT
ATAGACTATATTAAGTTTAACTAGTCCGTCAACTCTAACCTACTCGTCACTAACACAGAG
CTACGTCCATGAAATAAACTTCGAAGGCACTAGATTTCTAGTGTTTAAACGAACATAACA
TTCCCCGTCCAGTGACTATACATACCTTCAGTTTAAGAGCGATGACAGACAGACAAGAAA
GTCAACTTGCATACTATCTCACCTGTGTGTCACCCTCTTAACAGACAGCAACTTACTTAT
TTTAACACGATAAACACAACACACAACAGTTTCAGAATTGATTCATACCCAAAAACCTTG
ACAGTTGTACTTACCGTGTTAACATTCATTATTCCAAATTAAAATCCAACGTCATTCATC
ATAATTCCCGGATTTTTTTCGAAGCTGGTAACATTTACTTGACATTAGCTAAACGTCAAA
CTGACAAACGCAAAGATATCTTGGCCATTGTTGTTAAAGATATAACTACGCTAAAATTAC
GATAAAAAGGAACTATATTTCTATTAAAATGTTAACATTGGAGAGCTCAACACCAGTTAA
AATCTATTTAGTTAAATGTATCTAAACATTGATATGATTCGAACAGCTATTGACTATATT
GAATAATTTTGAAACTACATGTCTTTTCTAAAACATTCATATAATTAAAACACTCGAATT
CGACATATGATCATACTTTATACAGGGCGTCCCGAAATTATAGAACGGAGAAAAAGTAAC
TGAAAAATTGTTAAAAGAATAAATTTGCTGATTGGTCATATATTTTTTTAAAGTAACAAA
CCAAATTTTTTCAAATGCTTCATTTGTCTGTGAAAAGAATTAAATATGAAAAAAAAACAA
ACTTATTTTTTTTTAATGTCAACCAAAATTTTTTTTTTTTTGATTTAAGATTATAGGCCT
GATAACAAGATCTTTAAGCCATGTCAACCAAAAGCATTATAAAAATAATGATGTGATTGA
TTGGAATGCAATGTAGTGAAATGCAACGAAATGCAATGATTTTTTTATGACTGAAACGAT
TGTGGAATGAGTTGAAATGAAATGAAAGGGTATGAATTATGAAGTTAACAATGACTTGCA
ATTAATTGCAATGTTTTAGTGAAATGCAGTGTAATCAAGTACACTGTACTTGGGTAGGTA
TAAAGAGTAATGTAATGAAATGTAATTTTGTGAAGTTTTGTGAAATGATTAAAAGCAATG
TCTATAAAAATGTTTTTTTAAGAAAATATTTTTTTAAATTTAATTCGAAACGAAGACAAA
CAGGCAATTAAAAAAAGTTAAATTATAGTCTCAATATTAATCGATTGATCAAACATTACA
GTTTTGTTAACTTTTTCTTTTGTTGCATATTTTTGGACACCCTGTGCACTCACAGATGTT
ATATTATATAATAAATCAAATATACCCTTTTTACCCAAACATTTCAATATAATTCAACGA
TCAAAGACTAATACACTCACTCCGCCTTTTTTGAGTATATTTCCATTTATTATATGACAT
TAACAATTTATTGTAAATTTTTAATTAGCAATTAAAACCTTATATAATACTGTTCTCGGT
TAAAACTACATTTGATGTATTTGCTAATAGAGGACACGTAAAATTGAACGACACATAGAA
CACTCATATTTAATCTTCACCAAATTATTTATCACTGAATATATTCCATTCCGTTTCCTA
CACGTAACATCAACAACTTGGAATGGAAGTAGCTAGTATTTCTCTATTTTATAATAGAAT
TGGAATGACTGTGGTCCATTCCATTTATGTTACAATCGACACAGAAATTTCAATCTTATA
AATAGAATAGATTTAAGACTACGATCAAATATAGCGAGATACACAGTTCCGAACAGAGAC
CTGGAAAATATTGTCTCCAAAACTTACAACGATGATTATTACTTCCACAAGTATTTTGGT
AAATAAAGTCTATTGCAAATGTAAGGAACATATTCGTGACAAGCTATTTTTACCTAGTCA
TATTTGATCGAAGAATGAATTAAAATTACAATCACTTCAATTTACAAGATCGAATCCAAG
TCGATCCAAGTCAGTTCTTCAAGGAGCACAAGTTCATTCCATTTCACAAACAGAACGACA
GATCCAACACATCCACACACCCAGGGCAGTTTCCTTTACACTTAAACGTTTAATTAAAAT
TGATTATTATCTAGTAATTGTCGTGGAATTTGTCTATAAAGTCACACGTATGTTTCGACG
TGGCGTGAAGGATGGGCCCGGTCCTAGAACGAGGCTTCCACCAGGTAGGTGCCGTCCATG
GCAACACCGGTCTGGTTTCCTTGTACCGTGCTGCCCGCGGGAATGTACTTACCGCATGCT
TGCTGATATTTTTGCGGGCAGCAGCCACACCGCGCGCAGCAGGCGAGCAGAGCGGGCGCG
CGCGAGGAGTGCGCGGGGGACGCCAGCGGGGAGGGGGAGCCCGGCCTCTTCGCCGCGCCG
TTGAACGGGTTCTCAATCTCAACGAACTCCCGATCCTGAAGGCTTTCCATCTTCAGACAT
CAATAAGAGGCTGGAGGTGGCTGGTTCGGGCATCATAGTCGATCGAAGAGTCGGAGACCA
GCTCGCTCACCTTAACCTTCATCGTGGTCCTCTCCAAGCACCGTAGCAGATGATGATGCT
GCAACTCAAAAATGTCCTCATCTCTCCCCGCGTCGTCAAGTTCCACTCCCGACTCCTGGG
CGGCGAGGCGGGCTTCTGCTGCTTTCTTCTTGGAGACGAAGGCGGCTCCTGATGATGCTT
TGGCGATGCGGATACGGGCGAGACGCGCTTTCCGCTGCGCTTTCCTCTTATCAGCCCTCT
GGTTCTGATGGTAGATCCGTGAGAAGTTGGACACGATAACCGGCACAGGCAGGGCTATGA
CCAACACTCCGGAGAGAGAGCAGACACCGCCCACGATCTTACCGGCTATGGTGCCTGGGA
CCATGTCACCGTAGCTGGAAACGAAGACGAATTTGTTAGTGGAATCTTCTCGAGATATAC
TACTACTACTTGCAAATTGAGATTTTTTAGGGACCCAAAGGGTAAAATCGAG
(3832 bp)

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