SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23467c2_g2_i1
Scaffold_id
NCBI non-redundant
(nr)		iron_regulatory_protein_1_[Manduca_sexta]
Ontology
GO:0003723 F RNA binding
GO:0003994 F aconitate hydratase activity
GO:0005737 C cytoplasm
GO:0006099 P tricarboxylic acid cycle
GO:0006879 P cellular iron ion homeostasis
GO:0008152 P metabolic process
GO:0010040 P response to iron(II) ion
GO:0016829 F lyase activity
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
Transcript
Level		FPKM:10.86 TPM:10.64
ORF EntryO_TrvaFAMAMG27919_complete:A_TrvaFAMAMG_TR23467c2_g2_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTTTTTTTTTTTACCAAAATAGTCCTTTATTTACCCTTTACAACGTAAAT
ATCAATAATATAATAAATTGCTTTTCACCCTACCCCATACCCTGGGTGTAACGCAACCAT
ACACAAAAATATATTAGATATTTAAAATTACAAAATATCTGAAGAATATTCATTCACAAA
ACATAACTTAGACTTAACTTAATTTTAGATCATTTATAAACAGTGTAAATAAAACAATAT
TAATTAATATAAGTAGATATTAAATGAGTAATATTTTAAGAGAAGCCATGTTTTTTCCGT
ATTTTCATACATCGACTTTTTTAATGTTTTAGATATTTTTAACTTTTTTATAGCAGTTAT
ATGTAAACAAGTATACCCATGCTATACTGATTACCCTCGCTTAGGAACTTCTATAATATT
AGTATGAAGGCGCGTATGAAAAATGACATTAACAAGACTGACAGTTGTTATGGTCACTCT
AGCGGAGCGTCCAGTCTGTGGTAGCTGGGCGGCCATCTTAAAAACTCACTTATTTGAGAG
CGGTCTCCGGCGCACCACTCTGTCGACGAATCGCTATCTGTCACCTCAATCTTTAATTAT
TTTAAACTGATTAACGTTAATTAGAATATTGTTTGTAAAAGATTATTCAACTGTAAAGTT
ATTTCGAAGAAGTAAATGGTTTAAGTTTTGAAGACCATCCGATTCATTCAAATCATCTTT
ACTGGACTACCCACGCCATAAGCATGGATTTATTTAGATAAAAGCGCTCGTGCGCTTCTA
AGTATAAAAACTCCTCATTATTCTATTTTCACTGAACCATAGTCAAAGTTTGGTCAATTT
ACCCTATTTTCATTTATTGGTTGCGTTACACTCATAGTATTTCATTATTTTGTGATTTAA
ACTAAATACTTCACAACTCATTTATAGAAGCACCTTCTGTACTAGTTTTCGATAACAATA
ATAATTTAAGTTGATTTTTTTACTTTTAATCCATAAGGGTGTTTTAAAATGTATTATACA
GGATGTTCCATAGTGTGTAACAAACATAGTTTCTTAGCAAAGATTATTCGAAATTAACTA
TTCTTCCGATAAGCATCATAAAGATACAGTGTGTTGTTTTTTTGCCGATTTTGTTGGTTC
AATTTTCAGACAAACCAATCAATTTATGAAAAAGCTATGAATGCAGTATTATCAAACATC
TAAAATAAAATGACGTTTTCTTTCAGCAAAACATCTCTAATATTTAAGGTACTTCTCGTT
CATGTCGCAAAGTTCTGGGACACCCTGTATAGTATATTGTTTATAACTTATTATTGCTTA
TACTTAAACCCGATTCTAAATCTAATCACCATTTTGTTTATTACAAATATAAATAAGTAA
GTGTAATGTTTCATACTTTTTTTATTAATTTGTTCTATTTTAGAGTTCCTTATTATAAGT
AGAAAAATAGCTATTCTCAAAAGTGGAGTATCAAAACATCGTATTATGTATATCAAAAGA
AAATGCAAGTAAATCATATGTGTATTTAAAATACATTTTAACTATTGCGAAAGGAAAATT
TAGATAGAAAAACTTTAGAAAATTGTTGTAAAAAACCTAATATTAAAATCAACATTACTA
TTGTTCGTCATGTTACCATTGTAAATGTTTTGTTCAGAGCATCTTCCGCACCATGTAGTT
GAGGATGCCGCCGTTTTTGAAGTAGGTTAGATCGACTTCCGTGTCGAAACGCACCTTAAC
TTGGAATGTTTTCGTTTTGTCAACAGTGACGGTGACGAGCTGTCCCGGCGCGACGTGCGG
CGACAGCGCGATGTCGTAGGTCTCGGCGCCGGTGAGCTGCAGCGACTCGGCGTTGTCTCC
GGGGAGGAACTGCAGGGGGAGCAGGCCCATGCCGACCAGGTTGGAGCGGTGGATGCGCTC
GAACGACTCCGCTATCACCGCCTTTATACCCAGTAAGAAAGGTCCCTTGGCCGCCCAGTC
TCGACTAGATCCGGAGCCGTAGTCCTTGCCCACGATGGCGATCAGAGGCACATTCTCAGA
CGCGTACCTGTCTGCCGCGTCGAATATATCCATGACGTCGCCGGAGGGGTGGTGCGTGGT
GCGCGGCCCCGCGGTGGGCGCCATCTTGTTGACGAGCCGAATGTTCGCGAATGTTCCGCG
CGACATCACCGCGTCGTTGCCGCGACGTGAACCGTACGAGTTGAACTCGCGGGCCGTCAA
ACCTCTGTGCGCGAGGTACCGCGCGGCGGGCGAGTTCCGTGCGATGGAGCCGGCCGGCGA
GATGTGGTCGGTGGTGACGCTGTCCCCCAGCAGCAGCAGGCAGCGCGCGCCCGACACGCC
GCTGATCGGAGGCAGCTCCTTGGTCATACCGTCGAAGAACGGCGGTTTCTTGATGTAAGT
GGAGTTGACGTCCCACCCGTACAACCGACCCTGAGGCACGTCCAGGGTCTGCCATGATGA
AGAGCCTTGCTCTATGCGCGCGTACACCTCTTTAAACATCCCGGGTATAACGAACTGGTT
CTCGACGGCTTGGATCTCAGCGCGAGTCGGCCATATGTCTCGCAAGTACACCGCCGAACC
GTCCTCACGCTTACCCAACGGTTCCTTTTCGAAGTCGATATCAACAGTTCCGGCGAGCGC
GTACGCTATGACGAGCAGTGGCGAGGCGAGGTAGTTGGCGCGAGTGTTGGGGTGGATGCG
ACCCTCGAAGTTCCTGTTACCGGACAACACGCCGCAACATACTAGCTCGTTCTTTTCAAT
AGTGTTAGCGATGTTGTCGTCGATGGGTCCGGAGTTCCCGATGCAGGTCATGCAGCCGTA
CCCCACCGTGTTGAACCCGAGACGCTCCAAGTACGGAACCACGCCAGACTCCCTTAGATA
GTAAGTGACCACTCCGGAGCCCGGTGACAATGATGTCTTGATGTATGGTCGGACAGAGAG
ACCAGCTTCCACCGCTTTCTTTGCCAGGAGACCTGCTCCCAGCATGACGCTCGGGTTGGA
CGTGTTGGTGCATGATGTGATGGCGGCGATGACGACGGAGCCGTGCGTGATGCTGTACGT
CTTCCCGTCGCTGAACGAGAACTCGCCCGACGCTGACAGCAATGATGGGCTTAGACCGTA
GCCTTTGAAGCCGACCTTGTTAGTTAAACAGTTTCTAAAGTCCTTTTTCATGACGGAAAC
GGAAACGCGGTCCTGAGGCCGCTTGGGTCCGCTCACTGACGTCACTACTGATGATAAGTC
GAGCTCCACCACCTCTGAGAAGACAGGATCTTGTTCAGGATTGGTGTAGTCCCGGAACTG
TTTGGTTGCGCGTAAATAAGCCTCGATTATATCGATTTTCTCTTTGGGACGATTGGTCTG
GTGCAGGTAGCCGAGCGAGCGTGCGTCCACCGGGAAGTGTGCCAGCGTGGCTCCGAACTC
CGGACACATGTTGGCGACAGTGGCGCGGTCTGCTATACTCAGCGCCTCCACTCCTGGGCC
AAAGAACTCCACGAACTTGCCCACCACGCCCAAGGATCTCAGGTGCTTGGTAATAGTGAG
TACCAGGTCGGTGGATGTGACGAGCGGGTTCAGTTCCCCCACCAGCTTGTATCCCACCAC
TTTGGGCAGCAACATACTGATGGCTTGACCCAGCATCACGGCCTCCGCTTCGATTCCTCC
CACCCCCCACCCCACGACTCCCAGTCCGTTGATCATGGTGGTGTGGCTGTCGGTGCCCAC
CACGGAGTCGGGGTACAGCAGCCCCTGGGTGAACACCACGCGGGCCAGATACTCCAAGTT
TACTTGATGTACGATACCAGACCCAGGTGGCACTATTAACATGTTGTCGAAGGCTTGAGC
TCCCCACTTCAAGAATTGGAATCTTTCTTTATTCCTGACGAACTCTAAGTCTTGATTCTT
ACTTAATGCGTCGGGCGTTCTAGCGAAGTCGACTTGCACGGAGTGATCTATGACGAGATC
TGCGGGACAGATCGGGTTGATGCGATCCGGATCGCCGCCCAGATCGCGGACCGCGTCACG
CATGGCTGCGAAATCTACCACTGCTGGGACTCCTGTTAGATCCTGTAAGATAACTCTAGC
AGGTTTAAACGCGATCTCTACAGCTTCCTCGCTACTCTGATTCGCCTCCCAGTCCAGCAC
ATTGGCCACATCTTTCTCCAACACCTGGAAGTTGTCGCAGTTCCTCACGCACGACTCCAG
AAGCACCCTGATGCTGAAGGGAAGACGATCATATTTAGGGCCGAGTGCAGCCAGATCATA
GTAACTGTATGTCGTTCCGTTGATGTCTATCGTCTTCAGCAACTTGTTGTACGGGTTTGT
TGTGGCAGCCATTATGGATAGCCTAAAAGTCACGTCGCCGATATCACTAGCAAACGACCG
CGGTTTAGTTTATTTTAGTCGAATAAATGCGATTATTTTTGATAATTTCACGTCGCAAGT
TCGTTCATGCGATACGTTTGTCTACCGAAAATGACAAATGACAACTCACATTATGGATAG
CCTAAAAG
(4508 bp)

- SilkBase 1999-2023 -