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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23465c2_g1_i3
Scaffold_id
NCBI non-redundant
(nr)		c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
Transcript
Level		FPKM:13.68 TPM:13.40
ORF EntryO_TrvaFAMAMG27891_complete:A_TrvaFAMAMG_TR23465c2_g1_i3
Sequence
(Nucleotide)
TTTTTTTTTTAAATAGAAAGATTATTTTATTAGATGTTCGAACATTATGTAGCAATTAAT
GTTACATACCTCAAGGTGTCAACAACAAATAAAATATTTTGTGCTTTAAAAATAATTTAA
CAAAACTAAATACAACAATAAAATAGGTTAAAATGAAATAAGCATTACAAGATGAAGCAT
TCCACATAGGGCGAGGATCTACAACATTATAATATTTAAAACTACACTATTTTATACTAT
TGATACATCAAAAGGAGATATAAAACTTGAACTCAATGAAAATAAAGGACACAAAATCAA
TTGACTAGAATTTATGGATGTTTAATGAACATTACAAAACTATGTTTTAAGCTATTATTC
GATAAATATAGTTTACAAATTACATTCCAATTACAATGTTGTACTACTTAAAATAGATTG
TATTGTCAAACGTTGCTCGCCCTACACTAGTTGATGCGCAATCCGAGTATTAACTTTCTA
CCATAAACGCGGTAACTAATATTTTATACTTGGTAATGAGCTATCACTAAAATTAATGTT
ACGTGAAGCGTTCCGCCATTGCTCACAAAATGTCTAAACTTTGTTATCGCCAAACTGCAA
GTTATCACTCAAAGTTTGACTTTTGCCGATAAAATATTTCAAAATTTTATGTTAGTCATT
CTCATTAGTAAAACATGTGCAGAGCTGCATTCTTTTAAAATTGCACTTTTAAAAGAAGAG
CTCAATATTGTCACACCTAGTTTTAAATAAATAACTACGCTAAATTAAAAGTAAATAAGT
TTATTTTTTTATTATTTTTTATACAATTTTACATTTTTAGACATACTCTTTGGAACTCAG
CACAACTTTGGATTGTTTACACTGACGTAATATATTTTGAATATGTGTGTTACAATTATA
ATATCTATAGCGAACACTTGTACACTGATAGTTTTACTCATATCAAAGTTATTAATCTAC
AATTTTATATTATAGTCGAAGGCTAGTTACAAAACAATCTGACCATAAGTTACACTTATT
TTTTCTACATTTGTACAAAAACATACATAAAGTCATGGCATAATTTGGTATATTTAAGCA
TACATAAAGATCGACCACTACACTTGTTTTGACTGTAATATTTTTTTTGTTAAATTACAT
TCTGTAGTTGGCAACATTATAAAAATGTTGCCATATGAAACTCAACTTTTGAAAATGCTA
CCTTATGCATTGTACTAGATTAATTTTAAAATTTTAATAATGTTAATATTTGTTAGCATT
ATACTTAATTGTTCATTGAGTACCATTTATTATTAGAAAAAAATACCACCGGCACAAGAC
TAATAGTAAGGAGCGGGCACACTAAAATTATGCGAGTTTAAAGTAAGACACTTCCTTCCT
ACGGGATATCCTTGCCCAGTCTTCTTTATGCTCTATAATTCTTTTATGTTGCAATTAAAA
ATGCAACTTGTTAAGGTTGCATTACTTGCCTTATCTCGTTTTGGAGTGTCCGCTCCCTTA
CGACAATTTCACATTTTGAACTCCCTTTTTATATAACTGTAGTTATGTCAGTATAAAGGT
GATAGTTTAATATAATACGTGGTTTGTGAGCGCGCGTTCACCGCCGTCGCCGCCCGCAGA
GCGCGGCGCGTCGCAGTCGACGGAACAGCGACCACTCGCGCTATCAAATACGCTCCACGT
AGTTACCCGGGAAGGTACCGAATCGTCCCGTCCTCTGACTGGAGCCGACGTACCAGCCGT
CGTCACACTTCTCTAGCACGTACACGGTGTCGCCTTCATTCAGCTCCAACTCGTCAGGGT
TCTGAGGACGGTATTTGTACATCGCTCGGTATGGTATGGCCTCTGCGTTAGTGTCGACGT
ATAGAGGCTCCGTGTTGTTGAGGTCGACGCCGGAGCCGGTGGGAGGACCGTACCCGCGCT
CTGAAGGAGTTAGCGTCGCGTGAGCTGGCTTCGCTACGTAACCGGGCAGTGGTTGTGTGG
AAGGCGGTGCGTTAGCGAGCGCCGGGTTGTTCTGTTGCGGCGTGTAGCTGTGCGACCCCA
TACTCCTCTTGTCGGAGCCGTTGAGGAGCCCGTGGGCTGCCGGAGACGCCGCTGGCTTGT
CCGTGCTTAGGATTGGGCGGATTTCAGGTTTATTCTGACTAGGTTCCTGTAAGATAGTAA
CATAGCTGTCCGGGAAGATGCCCGTCTTCATTCCATTCCGTCCCTCCCACCAGTTCTGAT
CGATGCGTCTTGTCAACGTAACAACTTCACCTTTCTTCAGCGGTAACTCGAGGTTGGTCT
GCGCTATGAAATCGAACTTCGCTCTAGCTCGACCTTCGACTATCGATGGCTTTTTGACTG
GCTGAATTATATCACCCTTTTGTATCTCTACATAATTATACGGGAACAGTCCTACTCTCC
CATGTATTTCACCTTCGTACCAGTTCGCGTCGATCTGTCGTCGTACATGTATTATTTCTC
CTTTTCTAAAGCTGAGTTCTCGCGAGGTCTGTCCGTTGAATGTGTACAATGCTTTAGCAA
TAACTTTGTCCGCATCGTCGTATCTGTTGAGAGGTACCACTGATTTCTGTGACGGTGTGA
AGTTGTCTTGATGTCGTCTGTTTTGCATATCTTGAAGCTCCTGTAAATATTTATTTCGTT
TCTGTTCCCTGTACAGCCTCTTCATATGTTCAGCCTGTTGTCTGGCGAGCTCTCTCTCGG
GCACGAGGGGCAGCGGGTCGTGTCGCACCGGACACCGGTAGTGTATGTTCACGTCGCTTT
CCACGTAACGACGGGGAGACTCTTGTCTCGGTGGTGCGGGTGATCGGAACCCTCGTAAGG
GCGGCTCCCCCCCGGCCTGCAGGTCTCTATACGCGGCCCTCCTCTCCGCGGGGGAGAGCG
GCCCGTCCGTGTCCTCGCGACGACGGAATATCAGAGTCGAATCCGATTCGTAACCGGACT
CTTTTAGTGCTTTCGCCATGTTAGATTTTGACAAAATCGCTGAAGTGATATCCTTCTTCT
CTTTGGGTGATGGTTGGGGTAACGACGAAGTGCTGGATATGTTTTGCCCGTCAAAAATGT
CCATAACCTCGTCCCACCACTGTTTAGCTTCTTTATCGACGACAGAAGATTTCCCTGGAA
CGTAGTTCTCGATCCGTCCCGGTTGGTTCTTGTAAACTTCCTGACTAGCTCTCGCTGATG
CCAACGTACTGTATTTATTATTAGGTAAATAAGTAGAGCTGACGTCATGCGTCCTGCGTT
CTTCCTGCACGGAGGCGGTGCGCCGGCGCGGGCCGGTGGTGACGTCACTGTCGTACGCGT
CGCTCCACGCGCCCGCGCCCAGCCGGCCCGGCCCGCCCTCCGGCTCGCTCAGGTAGCCAG
AGCGAGGGTCGAAGTACGCGTACTGGGACTTGCTGCTGGATACGCGTTCTGGGATATCTC
GCCGATTTTTGTATCGAATTGTCACGTAATCGTCATCGTATTTATTTTTATGTATAGTGT
CGTACATTTTCTTATACCACCGCGAAGGGTCCTTGACTTCAGATCTGAGTGTAACCGGCA
TGCCGTCTTTAGTGATAGGTCCGATACCGTCCACCTTGCGTTGGGTATCAGACATCTTCC
GCGCCCCCGCACGATCGTAGTCACGTCGCTCAGCTTCACTCTCGCTCGCGTACTCCCTTC
TCAATGCATGTACTGGATCACTGCTGGGTGGCGAAGGTCGATCACGAGGGAGCCTGGCAC
TATCCCTCTCAGATTGCTGAGCGGAGCCTCGTGCCAATTGTCCTTCTCGTGCTTTCTGTA
ATAGAGTGACGGTTGGATTCTGTACTCGCGGCAGACGGCTGGTGGACGAGGAGCCGCTCA
GCGTGTTGAGGCCGGCGGCGGGCGCGCTCTGCGACGTACGCAGTCGACCCTCGCTCTCCG
AGCCACTTGTGCAACCGTTCTGTTCCGTGGTGGTAAATTTCCGGCGACTAGGAGGCGTCT
CCTCAAAGTGAACAGGTCGGAAGGTCTTCCGTGGGAACTGTGGAGATGGTTCAGTGCTGC
TCGGCGTCCAGATGGGTGGCGGCGGCGGAGGCGGCGGCCCGCCGGGACTACGCGCCGAGC
TTGGTGCCGGCGGTGGTGTAGGCGCTCCCGGCCTCCACACGGCGTTAAATGTATATCAGG
GTGACATTTCCCGGTGCGGCGTTCACAGAGCGGGGAGAGACGAACGGACGCGCGGAAAAC
TGTCGGAAAACGCGCGACGTTCTCGAACAAAACGCGAGCGTGCGACGTATGGGAGGGCCG
AGCACCGACTGATCCGT
(4277 bp)

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