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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23465c2_g1_i1
Scaffold_id
NCBI non-redundant
(nr)		c-Cbl-associated_protein_isoform_A_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006936 P muscle contraction
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0008134 F transcription factor binding
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0031589 P cell-substrate adhesion
GO:0043410 P positive regulation of MAPK cascade
GO:0051495 P positive regulation of cytoskeleton organization
GO:0051496 P positive regulation of stress fiber assembly
Transcript
Level		FPKM:12.02 TPM:11.78
ORF EntryO_TrvaFAMAMG27885_complete:A_TrvaFAMAMG_TR23465c2_g1_i1
Sequence
(Nucleotide)
TTTTTTTTTTAAATAGAAAGATTATTTTATTAGATGTTCGAACATTATGTAGCAATTAAT
GTTACATACCTCAAGGTGTCAACAACAAATAAAATATTTTGTGCTTTAAAAATAATTTAA
CAAAACTAAATACAACAATAAAATAGGTTAAAATGAAATAAGCATTACAAGATGAAGCAT
TCCACATAGGGCGAGGATCTACAACATTATAATATTTAAAACTACACTATTTTATACTAT
TGATACATCAAAAGGAGATATAAAACTTGAACTCAATGAAAATAAAGGACACAAAATCAA
TTGACTAGAATTTATGGATGTTTAATGAACATTACAAAACTATGTTTTAAGCTATTATTC
GATAAATATAGTTTACAAATTACATTCCAATTACAATGTTGTACTACTTAAAATAGATTG
TATTGTCAAACGTTGCTCGCCCTACACTAGTTGATGCGCAATCCGAGTATTAACTTTCTA
CCATAAACGCGGTAACTAATATTTTATACTTGGTAATGAGCTATCACTAAAATTAATGTT
ACGTGAAGCGTTCCGCCATTGCTCACAAAATGTCTAAACTTTGTTATCGCCAAACTGCAA
GTTATCACTCAAAGTTTGACTTTTGCCGATAAAATATTTCAAAATTTTATGTTAGTCATT
CTCATTAGTAAAACATGTGCAGAGCTGCATTCTTTTAAAATTGCACTTTTAAAAGAAGAG
CTCAATATTGTCACACCTAGTTTTAAATAAATAACTACGCTAAATTAAAAGTAAATAAGT
TTATTTTTTTATTATTTTTTATACAATTTTACATTTTTAGACATACTCTTTGGAACTCAG
CACAACTTTGGATTGTTTACACTGACGTAATATATTTTGAATATGTGTGTTACAATTATA
ATATCTATAGCGAACACTTGTACACTGATAGTTTTACTCATATCAAAGTTATTAATCTAC
AATTTTATATTATAGTCGAAGGCTAGTTACAAAACAATCTGACCATAAGTTACACTTATT
TTTTCTACATTTGTACAAAAACATACATAAAGTCATGGCATAATTTGGTATATTTAAGCA
TACATAAAGATCGACCACTACACTTGTTTTGACTGTATTTTTTTTTGTTAAATTACATTC
TGTAGTTGGCAACATTATAAAATTGTTGCCATATGAAAATCAACTTTTGAAAATGCTACC
TTATGCATTGTACTAGATTAATTTTAAAATTTTAATAATGTTAATATTTGTTAGCATTAT
ACTTAATTGTTCATTGAGTACCATTTATTATTAGAAAAAAATACCACCGGCACAAGACTA
ATAGTAAGGAGCGGGCACACTAAAATTATGCGAGTTTAAAGTAAGACACTTCCTTCCTAC
GGGATATCCTTGCCCAGTCTTCTTTATGCTCTATAATTCTTTTATGTTGCAATTAAAAAT
GCAACTTGTTAAGGTTGCATTACTTGCCTTATCTCGTTTTGGAGTGTCCGCTCCCTTACG
ACAATTTCACATTTTGAACTCCCTTTTTATATAACTGTAGTTATGTCAGTATAAAGGTGA
TAGTTTAATATAATACGTGGTTTGTGAGCGCGCGTTCACCGCCGTCGCCGCCCGCAGAGC
GCGGCGCGTCGCAGTCGACGGAACAGCGACCACTCGCGCTATCAAATACGCTCCACGTAG
TTACCCGGGAAGGTACCGAATCGTCCCGTCCTCTGACTGGAGCCGACGTACCAGCCGTCG
TCACACTTCTCTAGCACGTACACGGTGTCGCCTTCATTCAGCTCCAACTCGTCAGGGTTC
TGAGGACGGTATTTGTACATCGCTCGGTATGGTATGGCCTCTGCGTTAGTGTCGACGTAT
AGAGGCTCCGTGTTGTTGAGGTCGACGCCGGAGCCGGTGGGAGGACCGTACCCGCGCTCT
GAAGGAGTTAGCGTCGCGTGAGCTGGCTTCGCTACGTAACCGGGCAGTGGTTGTGTGGAA
GGCGGTGCGTTAGCGAGCGCCGGGTTGTTCTGTTGCGGCGTGTAGCTGTGCGACCCCATA
CTCCTCTTGTCGGAGCCGTTGAGGAGCCCGTGGGCTGCCGGAGACGCCGCTGGCTTGTCC
GTGCTTAGGATTGGGCGGATTTCAGGTTTATTCTGACTAGGTTCCTGTAAGATAGTAACA
TAGCTGTCCGGGAAGATGCCCGTCTTCATTCCATTCCGTCCCTCCCACCAGTTCTGATCG
ATGCGTCTTGTCAACGTAACAACTTCACCTTTCTTCAGCGGTAACTCGAGGTTGGTCTGC
GCTATGAAATCGAACTTCGCTCTAGCTCGACCTTCGACTATCGATGGCTTTTTGACTGGC
TGAATTATATCACCCTTTTGTATCTCTACATAATTATACGGGAACAGTCCTACTCTCCCA
TGTATTTCACCTTCGTACCAGTTCGCGTCGATCTGTCGTCGTACATGTATTATTTCTCCT
TTTCTAAAGCTGAGTTCTCGCGAGGTCTGTCCGTTGAATGTGTACAATGCTTTAGCAATA
ACTTTGTCCGCATCGTCGTATCTGTTGAGAGGTACCACTGATTTCTGTGACGGTGTGAAG
TTGTCTTGATGTCGTCTGTTTTGCATATCTTGAAGCTCCTGTAAATATTTATTTCGTTTC
TGTTCCCTGTACAGCCTCTTCATATGTTCAGCCTGTTGTCTGGCGAGCTCTCTCTCGGGC
ACGAGGGGCAGCGGGTCGTGTCGCACCGGACACCGGTAGTGTATGTTCACGTCGCTTTCC
ACGTAACGACGGGGAGACTCTTGTCTCGGTGGTGCGGGTGATCGGAACCCTCGTAAGGGC
GGCTCCCCCCCGGCCTGCAGGTCTCTATACGCGGCCCTCCTCTCCGCGGGGGAGAGCGGC
CCGTCCGTGTCCTCGCGACGACGGAATATCAGAGTCGAATCCGATTCGTAACCGGACTCT
TTTAGTGCTTTCGCCATGTTAGATTTTGACAAAATCGCTGAAGTGATATCCTTCTTCTCT
TTGGGTGATGGTTGGGGTAACGACGAAGTGCTGGATATGTTTTGCTGTTTAGCTTCTTTA
TCGACGACAGAAGATTTCCCTGGAACGTAGTTCTCGATCCGTCCCGGTTGGTTCTTGTAA
ACTTCCTGACTAGCTCTCGCTGATGCCAACGTACTGTATTTATTATTAGGTAAATAAGTA
GAGCTGACGTCATGCGTCCTGCGTTCTTCCTGCACGGAGGCGGTGCGCCGGCGCGGGCCG
GTGGTGACGTCACTGTCGTACGCGTCGCTCCACGCGCCCGCGCCCAGCCGGCCCGGCCCG
CCCTCCGGCTCGCTCAGGTAGCCAGAGCGAGGGTCGAAGTACGCGTACTGGGACTTGCTG
CTGGATACGCGTTCTGGGATATCTCGCCGATTTTTGTATCGAATTGTCACGTAATCGTCA
TCGTATTTATTTTTATGTATAGTGTCGTACATTTTCTTATACCACCGCGAAGGGTCCTTG
ACTTCAGATCTGAGTGTAACCGGCATGCCGTCTTTAGTGATAGGTCCGATACCGTCCACC
TTGCGTTGGGTATCAGACATCTTCCGCGCCCCCGCACGATCGTAGTCACGTCGCTCAGCT
TCACTCTCGCTCGCGTACTCCCTTCTCAATGCATGTACTGGATCACTGCTGGGTGGCGAA
GGTCGATCACGAGGGAGCCTGGCACTATCCCTCTCAGATTGCTGAGCGGAGCCTCGTGCC
AATTGTCCTTCTCGTGCTTTCTGTAATAGAGTGACGGTTGGATTCTGTACTCGCGGCAGA
CGGCTGGTGGACGAGGAGCCGCTCAGCGTGTTGAGGCCGGCGGCGGGCGCGCTCTGCGAC
GTACGCAGTCGACCCTCGCTCTCCGAGCCACTTGTGCAACCGTTCTGTTCCGTGGTGGTA
AATTTCCGGCGACTAGGAGGCGTCTCCTCAAAGTGAACAGGTCGGAAGGTCTTCCGTGGG
AACTGTGGAGATGGTTCAGTGCTGCTCGGCGTCCAGATGGGTGGCGGCGGCGGAGGCGGC
GGCCCGCCGGGACTACGCGCCGAGCTTGGTGCCGGCGGTGGTGTAGGCGCTCCCGGCCTC
CACACGGCGTTAAATGTATATCAGGGTGACATTTCCCGGTGCGGCGTTCACAGAGCGGGG
AGAGACGAACGGACGCGCGGAAAACTGTCGGAAAACGCGCGACGTTCTCGAACAAAACGC
GAGCGTGCGACGTATGGGAGGGCCGAGCACCGACTGATCCGT
(4242 bp)

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