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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_TrvaFAMAMG_TR23446c2_g4_i5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC106124430_[Papilio_xuthus]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:1.25 TPM:1.23
ORF EntryO_TrvaFAMAMG27626_complete:A_TrvaFAMAMG_TR23446c2_g4_i5
Sequence
(Nucleotide)
GGATCTTATAGAGGAAGTAGTAATAGCGGCATCGTCAATCTGTGGTTTCAATTTAGCGAA
TAGTACCACAAATAGTACAGTAAAATATCTTCTGTGCTGTGCGGTGAAATCTAGTAGAAG
TTGGGCTTTATCTCAATCCCAAGAATATGTCATCAAGAGGCAGGGGGTATGGAAGAGGAA
GTTACAGTGGGGGTAGGGGAGGCGGTTACAGAGGATCTTATAGAGGAAGTAGTAACAGAG
GCTCTTACGAAAGCCGTGGAGGTCGTGGTGGTGGCAGTTATTCTTCATACAATAATGAAA
CCCGTTATAATAGTGGTGGAAGAAACTACAACAATAGTCGTGACAGAATAGAAGAACCAT
ATAAAAAATCATACCGGAATGTAAGTTGTTTCAAATTGTTATTGTTGAATTTGTAATAAA
AATAACTCACAATTAATGTCTGTTTCAATAGGAGAGCTCTCTTAATTATTCAAACAGAGA
ATACGGAGGTAGAGGAGTATCACCAGAAAGAAAAAGAATGAGGATGGAGGCATCAACTGA
AAGACGTAGCCATGACGGGGGCGGCGGTCATTATGGCGCTTACAGTTCAAGAGCTGAAAA
TTACGGAGTGGAAAGAAGGTCTTTTGTCGGCGAAGAAAGGAGACGGTCGCCCGCCAGAGA
GTACCGCAAACCGAGCGACATGGGCCCTCCGCGCGAGGCGCGCTCCGGCGCCACCCGGCC
GCGCCGCTCCTTCCGCGGCCGTGCTCTGCGCTCGCGAGCCCTCTACCGCGGCGCACCCCG
TTCTCGCGCTTCCTTTACTAGGCGCTTCGCCGACAGAACAATCAATTACAACAGAGCCTT
TAGAAGCGTCAAAGGGCGCAGTTCCATTAAATCCAAAGAAGAAGCTTCTTCAACTGAGGA
AGACTGGGATGCCGAAGAAGACAAGGAGCCAGTAACTGAAGAAAAAAAAGAACAGAAAAC
TAAATCACCAAAGGTAGAAGCTGAGGATTCTGACGCTGAAGCAGCAGTTACCGCGGGCGT
TGACGACACCGATAAAGAACCCGATACTACTTCTGACACCGCAACACGATCCTTTGTGAA
TCTTGTATGCGTACATTGTAAAAAAAAATGTGGCAGTTTTGGGAGGTACGCGAAACACTT
GGTGTCAGTGCGGCACCGCGCGGCGATGAGCGTGGTGGCGCGGCGTCACAAGTCGCAGTT
GTTGCGCATGCGCGTGGCGCAGCGAGCCGCCCAGCGCGAGCTCGAGGCGACGTCGGGCGC
CGACCTCGCCGAGCGCACCACCTTCTGTCCCGTGTGCCGGCTCAACCACCGCACCACGCG
CGAGGCGCACAACCTCAGCGATACTCATCGAACTATGAAACGTTTCCTGATGCCCTTCTG
TCGTGTCTGCCGCATAACCTATCGCTCTCCGATGATATATGAACATCATATCTGTTCCAT
TGAACACATCAAGAAGAAAGCTAATAAGGCATCGCTTCGCGCTAGTCCGAAGGCAGAAGG
CAGTGGAGATGAAGGCATGGATGTTGATTTGGATAACTTCATGACTCTTGATTCTGTGGG
TGATGTTGATGAAGTCGAAGATGGTGATTCTGGCGCAGAGAAAAAAGACGAAGCTAGCCC
AAAAAAACCAAAGGTTGAGATAAACATTGGAAGTGAACATATTAAAAAGCTGGAGGTGTG
GTGGTGCGAGCTGTGCCGCACGTACCTCACGCGCGCCGAAACGGGCGGCGCCGAGCTCAC
GGAGGTGGTGCGGCGCCACTGTCGCCTGCGCATGCACCTCGGCCGCTACGTGCAGTACCG
CGACACGCGCACGCTGCGCAAGCACGCCGAGCGGATACACCGCCAGCTGCACCAACAGAA
ACAAGACACAGAAGAATCCGCAACCAATAATGAAAAAGCTGTCAAGGTGGAGAAAAACGA
ATCTGTTGATGAAACCAAGACTAAATTGGAAAATGGAGCTGAAGTTTCTAACTCATCCGC
TAATGAAGATAAATTGTGGGCTGACGTTGATAAAGATATTGGTGAGCTTCTCCGGGAAGT
AGATCCACAAGGAAACGAAGGAACTGATGATGAGGAAGATCTTGATAGATATGAAAAATA
TCGCAAAACTGATACTAAGAAGCCAAAGGAAAGCGATGTTGCTGAAAACGATACAAACAC
AACTGGAGAGAAAAAATCGATTGAAGTTAATACATCTGCTTAGTCATTTGCTAAAAATTA
AAACTAAGTAATTATAATATTATTGTTTTCTGCATATATCTATCATAATCTATTATCAAT
GACAAAGGTCAAATAAATTTGAAAATCCTTAAATTTAATTTTACTATTTCATACCATCTA
TCTATCTTGGTTATTGGGGTGGTGCCTGTAATCACCTGACACTTCGACCCAATCGGATCT
TTTGTATCACGACCCCTTCCTTTATTCCTCGGCTT
(2435 bp)

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